Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13600 Aethionema arabicum HOM05D001867 ORTHO05D001708 7.8e-95 350.5 185 100.0
Carub.0007s2479 Capsella rubella HOM05D001867 ORTHO05D001708 2.2e-41 172.9 204 57.8
AT4G16610 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 8.5e-41 171.0 205 57.6
BraA03t14096Z Brassica rapa HOM05D001867 ORTHO05D001708 9.4e-40 167.5 219 54.3
Aa31LG2G12750 Aethionema arabicum HOM05D001867 ORTHO05D001708 1.6e-39 166.8 236 52.5
A03p50020 Brassica napus HOM05D001867 ORTHO05D001708 2.7e-39 166.0 219 54.3
Thhalv10026010m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 6.1e-39 164.9 220 54.5
Sp7g15230 Schrenkiella parvula HOM05D001867 ORTHO05D001708 6.1e-39 164.9 212 56.1
AL7G38150 Arabidopsis lyrata HOM05D001867 ORTHO05D001708 1.8e-38 163.3 199 55.3
BcaC07g38000 Brassica carinata HOM05D001867 ORTHO05D001708 1.8e-38 163.3 211 55.0
BolC8t48382H Brassica oleracea HOM05D001867 ORTHO05D001708 1.8e-38 163.3 211 55.0
A08p12590 Brassica napus HOM05D001867 ORTHO05D001708 1.1e-37 160.6 211 53.1
BraA08t33249Z Brassica rapa HOM05D001867 ORTHO05D001708 1.1e-37 160.6 211 53.1
C01p26080 Brassica napus HOM05D001867 ORTHO05D001708 2.0e-37 159.8 197 56.3
BolC1t02553H Brassica oleracea HOM05D001867 ORTHO05D001708 2.0e-37 159.8 197 56.3
BraA01t01997Z Brassica rapa HOM05D001867 ORTHO05D001708 2.2e-36 156.4 202 53.0
BcaC06g33500 Brassica carinata HOM05D001867 ORTHO05D001708 1.8e-35 153.3 208 51.9
C07p48070 Brassica napus HOM05D001867 ORTHO05D001708 1.8e-35 153.3 208 51.9
BolC7t45331H Brassica oleracea HOM05D001867 ORTHO05D001708 1.8e-35 153.3 208 51.9
A01p20750 Brassica napus HOM05D001867 ORTHO05D001708 4.1e-35 152.1 199 52.8
BcaNung02859 Brassica carinata HOM05D001867 ORTHO05D001708 5.5e-32 141.7 221 47.1
CARHR223110 Cardamine hirsuta HOM05D001867 ORTHO05D001708 4.7e-31 138.7 210 50.0
THA.LOC104812776 Tarenaya hassleriana HOM05D001867 ORTHO05D001708 3.3e-21 105.9 249 39.0
THA.LOC104814708 Tarenaya hassleriana HOM05D001867 ORTHO05D001708 8.5e-17 91.3 167 43.1
Dinv21642 Davidia involucrata HOM05D001867 ORTHO05D001708 1.1e-11 74.3 167 40.1
Actinidia02138 Actinidia chinensis HOM05D001867 ORTHO05D001708 1.4e-11 73.9 147 40.8
Glyma.17G142300 Glycine max HOM05D001867 ORTHO05D001708 1.6e-10 70.5 135 42.2
Hma1.2p1_1172F.1_g263650 Hydrangea macrophylla HOM05D001867 ORTHO05D001708 2.0e-10 70.1 167 40.1
Cpa.g.sc29.163 Carica papaya HOM05D001867 ORTHO05D001708 4.5e-10 68.9 166 35.5
CSS0027051 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 5.9e-10 68.6 159 36.5
Hma1.2p1_0316F.1_g123130 Hydrangea macrophylla HOM05D001867 ORTHO05D001708 5.9e-10 68.6 168 36.9
Thecc.03G250600 Theobroma cacao HOM05D001867 ORTHO05D001708 5.9e-10 68.6 233 33.5
Glyma.11G033100 Glycine max HOM05D001867 ORTHO05D001708 1.0e-09 67.8 149 38.3
Manes.02G039900 Manihot esculenta HOM05D001867 ORTHO05D001708 1.0e-09 67.8 200 35.0
Manes.01G081000 Manihot esculenta HOM05D001867 ORTHO05D001708 1.3e-09 67.4 181 37.0
Ciclev10021224m.g Citrus clementina HOM05D001867 ORTHO05D001708 1.7e-09 67.0 177 37.3
Gohir.D12G097800 Gossypium hirsutum HOM05D001867 ORTHO05D001708 2.3e-09 66.6 151 38.4
Gorai.008G106500 Gossypium raimondii HOM05D001867 ORTHO05D001708 2.3e-09 66.6 151 38.4
VMungo1215G3293 Vigna mungo HOM05D001867 ORTHO05D001708 2.3e-09 66.6 195 34.4
Haze_07909 Corylus avellana HOM05D001867 ORTHO05D001708 3.8e-09 65.9 196 33.7
Duzib205G1684 Durio zibethinus HOM05D001867 ORTHO05D001708 3.8e-09 65.9 180 36.1
VMungo0251G1335 Vigna mungo HOM05D001867 ORTHO05D001708 3.8e-09 65.9 145 37.2
Gohir.A12G095200 Gossypium hirsutum HOM05D001867 ORTHO05D001708 5.0e-09 65.5 151 38.4
Cfa012722 Carpinus fangiana HOM05D001867 ORTHO05D001708 6.5e-09 65.1 199 32.2
Glyma.05G059800 Glycine max HOM05D001867 ORTHO05D001708 8.6e-09 64.7 136 39.0
TPR.G4979 Trifolium pratense HOM05D001867 ORTHO05D001708 8.6e-09 64.7 151 35.1
Phvul.002G058900 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 1.1e-08 64.3 197 34.0
PGSC0003DMG400004763 Solanum tuberosum HOM05D001867 ORTHO05D001708 1.1e-08 64.3 80 46.2
Glyma.01G209100 Glycine max HOM05D001867 ORTHO05D001708 1.5e-08 63.9 155 38.1
CAN.G1058.30 Capsicum annuum HOM05D001867 ORTHO05D001708 1.9e-08 63.5 140 36.4
Lalb_Chr12g0207861 Lupinus albus HOM05D001867 ORTHO05D001708 3.2e-08 62.8 169 38.5
Phvul.003G221000 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 3.2e-08 62.8 145 35.9
Sopen08g027070 Solanum pennellii HOM05D001867 ORTHO05D001708 4.2e-08 62.4 148 35.8
arahy.Tifrunner.gnm1.ann1.2QI3HV Arachis hypogaea HOM05D001867 ORTHO05D001708 5.5e-08 62.0 184 33.7
CiPaw.11G079500 Carya illinoinensis HOM05D001867 ORTHO05D001708 5.5e-08 62.0 191 33.5
CiPaw.12G052400 Carya illinoinensis HOM05D001867 ORTHO05D001708 5.5e-08 62.0 209 31.1
FAN04G1302 Fragaria x ananassa HOM05D001867 ORTHO05D001708 7.2e-08 61.6 177 33.9
Sabra03G0047600 Salix brachista HOM05D001867 ORTHO05D001708 9.5e-08 61.2 185 35.7
CANSAT21G2160 Cannabis sativa HOM05D001867 ORTHO05D001708 1.2e-07 60.8 155 33.5
FvH4_5g19030 Fragaria vesca HOM05D001867 ORTHO05D001708 1.2e-07 60.8 177 35.6
Lalb_Chr09g0324371 Lupinus albus HOM05D001867 ORTHO05D001708 1.2e-07 60.8 182 36.3
Duzib084G0597 Durio zibethinus HOM05D001867 ORTHO05D001708 1.6e-07 60.5 200 34.0
Gorai.004G198300 Gossypium raimondii HOM05D001867 ORTHO05D001708 1.6e-07 60.5 207 33.3
Lalb_Chr16g0386711 Lupinus albus HOM05D001867 ORTHO05D001708 1.6e-07 60.5 170 33.5
HPP92_007425 Vanilla planifolia HOM05D001867 ORTHO05D001708 2.1e-07 60.1 162 35.8
Peaxi162Scf00174g00149 Petunia axillaris HOM05D001867 ORTHO05D001708 2.8e-07 59.7 141 37.6
Potri.003G077200 Populus trichocarpa HOM05D001867 ORTHO05D001708 2.8e-07 59.7 188 36.2
TWI60G0642 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 3.6e-07 59.3 206 32.5
TAR629G0567 Trochodendron aralioides HOM05D001867 ORTHO05D001708 3.6e-07 59.3 194 31.4
FAN13G2590 Fragaria x ananassa HOM05D001867 ORTHO05D001708 4.7e-07 58.9 177 33.3
FAN18G0011 Fragaria x ananassa HOM05D001867 ORTHO05D001708 4.7e-07 58.9 177 33.3
Solyc08g078590.1 Solanum lycopersicum HOM05D001867 ORTHO05D001708 4.7e-07 58.9 149 33.6
Lj1g0010457 Lotus japonicus HOM05D001867 ORTHO05D001708 6.1e-07 58.5 196 31.6
Gohir.D08G188400 Gossypium hirsutum HOM05D001867 ORTHO05D001708 8.0e-07 58.2 207 32.9
Lalb_Chr05g0214451 Lupinus albus HOM05D001867 ORTHO05D001708 8.0e-07 58.2 185 32.4
PGSC0003DMG400011873 Solanum tuberosum HOM05D001867 ORTHO05D001708 8.0e-07 58.2 170 32.9
Nitab4.5_0001076g0050 Nicotiana tabacum HOM05D001867 ORTHO05D001708 1.0e-06 57.8 167 34.7
TAR375G0447 Trochodendron aralioides HOM05D001867 ORTHO05D001708 1.4e-06 57.4 193 36.3
Actinidia12181 Actinidia chinensis HOM05D001867 ORTHO05D001708 1.8e-06 57.0 179 34.1
Glyma.03G033600 Glycine max HOM05D001867 ORTHO05D001708 1.8e-06 57.0 71 46.5
Nitab4.5_0000618g0040 Nicotiana tabacum HOM05D001867 ORTHO05D001708 1.8e-06 57.0 168 34.5
Phvul.010G071300 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 1.8e-06 57.0 74 45.9
Gohir.D12G219400 Gossypium hirsutum HOM05D001867 ORTHO05D001708 2.3e-06 56.6 204 33.8
Lj5P105T25 Lonicera japonica HOM05D001658 ORTHO05D001406 2.3e-06 56.6 78 47.4
VMungo0331G0147 Vigna mungo HOM05D001867 ORTHO05D001708 2.3e-06 56.6 71 46.5
Duzib068G0794 Durio zibethinus HOM05D001867 ORTHO05D001708 3.0e-06 56.2 200 32.5
FAN08G0309 Fragaria x ananassa HOM05D001867 ORTHO05D001708 3.0e-06 56.2 177 32.8
Zm00001eb074570 Zea mays HOM05D001867 ORTHO05D001708 3.0e-06 56.2 130 34.6
COL.COLO4_37170 Corchorus olitorius HOM05D001867 ORTHO05D001708 4.0e-06 55.8 189 30.7
CsaV3_3G007370 Cucumis sativus L. HOM05D001867 ORTHO05D001708 4.0e-06 55.8 182 31.9
Lj4g0002770 Lotus japonicus HOM05D001867 ORTHO05D001708 4.0e-06 55.8 172 33.7
arahy.Tifrunner.gnm1.ann1.LUSX59 Arachis hypogaea HOM05D001867 ORTHO05D001708 5.2e-06 55.5 182 31.3
MELO3C005530.2 Cucumis melo HOM05D001867 ORTHO05D001708 5.2e-06 55.5 127 40.2
Solyc06g060740.3 Solanum lycopersicum HOM05D001867 ORTHO05D001708 5.2e-06 55.5 171 32.2
CSS0006199 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 6.8e-06 55.1 77 41.6
Dinv44115 Davidia involucrata HOM05D001867 ORTHO05D001708 6.8e-06 55.1 173 32.4
Gohir.A08G170100 Gossypium hirsutum HOM05D001867 ORTHO05D001708 6.8e-06 55.1 207 32.4
Sopen06g020860 Solanum pennellii HOM05D001867 ORTHO05D001708 6.8e-06 55.1 171 32.2
TWI34G0283 Tripterygium wilfordii HOM05D001658 ORTHO05D001406 6.8e-06 55.1 68 47.1
MD04G1063600 Malus domestica HOM05D001867 ORTHO05D001708 8.8e-06 54.7 185 31.4
VMungo1215G1529 Vigna mungo HOM05D001658 ORTHO05D001406 8.8e-06 54.7 72 41.7


User provided reference genes

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