Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 2.2e-105 385.6 187 100.0
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 3.8e-73 278.5 197 75.1
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 5.0e-73 278.1 193 75.1
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 8.5e-73 277.3 196 75.0
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 4.2e-72 275.0 196 74.5
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 1.5e-69 266.5 173 76.9
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 4.8e-68 261.5 196 70.4
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 3.8e-65 251.9 194 69.1
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 8.5e-65 250.8 191 69.6
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 1.1e-64 250.4 194 68.6
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 1.1e-64 250.4 194 68.6
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 1.9e-64 249.6 189 69.3
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 1.9e-64 249.6 194 69.6
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.6e-63 246.5 208 65.9
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 8.5e-57 224.2 202 59.4
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.1e-56 223.8 202 59.4
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 5.5e-56 221.5 179 65.4
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 5.5e-56 221.5 179 65.4
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 7.2e-56 221.1 197 58.4
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 7.2e-56 221.1 183 61.2
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 9.4e-56 220.7 194 60.8
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.6e-55 219.9 206 56.8
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 2.7e-55 219.2 198 60.1
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.7e-55 219.2 198 60.1
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 4.7e-55 218.4 191 60.7
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.0e-54 217.2 212 54.7
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 1.8e-54 216.5 192 60.9
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 4.0e-54 215.3 199 56.8
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 4.0e-54 215.3 199 59.3
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 5.2e-54 214.9 194 59.8
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 5.2e-54 214.9 200 58.5
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 5.2e-54 214.9 198 56.1
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 6.8e-54 214.5 194 57.7
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 6.8e-54 214.5 203 59.6
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 6.8e-54 214.5 205 60.0
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 8.8e-54 214.2 185 58.9
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 1.5e-53 213.4 130 78.5
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 2.0e-53 213.0 199 55.3
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 2.6e-53 212.6 120 82.5
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.4e-53 212.2 203 58.1
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 9.8e-53 210.7 120 80.8
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 9.8e-53 210.7 193 60.1
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 9.8e-53 210.7 181 61.3
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 1.3e-52 210.3 179 62.0
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 1.3e-52 210.3 190 57.4
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 1.3e-52 210.3 113 85.0
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 1.7e-52 209.9 208 55.3
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.7e-52 209.9 190 55.8
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 2.2e-52 209.5 136 74.3
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.2e-52 209.5 117 83.8
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 2.2e-52 209.5 207 55.1
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 2.2e-52 209.5 200 56.5
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 2.8e-52 209.1 121 80.2
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 3.7e-52 208.8 199 57.8
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 3.7e-52 208.8 200 56.5
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 6.3e-52 208.0 211 55.5
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 8.3e-52 207.6 173 63.0
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 8.3e-52 207.6 194 59.3
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 1.1e-51 207.2 135 74.1
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 1.4e-51 206.8 120 80.8
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.4e-51 206.8 217 54.4
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 1.8e-51 206.5 196 56.1
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 1.8e-51 206.5 204 56.9
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 2.4e-51 206.1 129 75.2
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 2.4e-51 206.1 138 72.5
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.1e-51 205.7 191 60.2
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 3.1e-51 205.7 203 57.6
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 3.1e-51 205.7 194 57.7
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 5.4e-51 204.9 193 57.5
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 5.4e-51 204.9 140 70.0
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 2.0e-50 203.0 212 54.7
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 3.5e-50 202.2 192 55.7
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 4.5e-50 201.8 136 69.9
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 7.7e-50 201.1 203 57.6
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 7.7e-50 201.1 179 62.6
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 2.2e-49 199.5 211 52.6
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 2.9e-49 199.1 182 58.2
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 3.8e-49 198.7 201 56.7
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 8.5e-49 197.6 158 61.4
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.9e-48 196.4 199 53.3
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 2.5e-48 196.1 113 79.6
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 2.5e-48 196.1 113 79.6
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 2.5e-48 196.1 113 79.6
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 4.2e-48 195.3 212 53.3
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 4.2e-48 195.3 113 78.8
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 9.4e-48 194.1 208 54.3
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 9.4e-48 194.1 113 77.0
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 9.4e-48 194.1 196 53.1
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 1.6e-47 193.4 165 60.6
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 2.7e-47 192.6 148 62.8
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 2.7e-47 192.6 204 50.5
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 2.7e-47 192.6 141 68.1
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 6.1e-47 191.4 154 60.4
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.0e-46 190.7 161 58.4
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 2.3e-46 189.5 167 60.5
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 6.8e-46 188.0 106 79.2
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 6.8e-46 188.0 121 72.7
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 1.2e-45 187.2 113 73.5
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 2.6e-45 186.0 166 59.6
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 2.6e-45 186.0 113 72.6
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 3.4e-45 185.7 127 67.7
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 6.3e-44 181.4 198 52.0
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 1.8e-43 179.9 113 70.8
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 9.1e-43 177.6 122 63.9
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 9.1e-43 177.6 137 60.6
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.2e-42 177.2 120 65.0
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.2e-42 177.2 195 50.8
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 8.6e-41 171.0 168 53.0
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 1.1e-40 170.6 167 50.9
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 1.9e-40 169.9 110 69.1
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 2.5e-40 169.5 95 78.9
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 2.5e-40 169.5 120 65.0
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 3.3e-40 169.1 175 52.0
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 1.6e-39 166.8 144 56.2
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 3.6e-39 165.6 172 55.2
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 8.0e-39 164.5 137 53.3
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 1.8e-38 163.3 108 67.6
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 2.3e-38 162.9 113 66.4
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 2.6e-37 159.5 174 50.6
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 5.7e-37 158.3 104 68.3
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 4.6e-34 148.7 105 65.7
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 6.8e-30 134.8 129 48.8
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 1.9e-27 126.7 137 46.7
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 6.0e-26 121.7 150 44.7
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 5.6e-24 115.2 131 48.1
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 4.0e-22 109.0 133 40.6
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 5.2e-14 82.0 66 56.1
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 3.1e-06 56.2 146 32.2


User provided reference genes

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