Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G3430 Aethionema arabicum HOM05D000567 ORTHO05D000767 1.4e-28 129.0 69 100.0
Aa31sc16G50 Aethionema arabicum HOM05D000567 ORTHO05D000767 2.4e-25 118.2 69 91.3
Aa31LG6G610 Aethionema arabicum HOM05D000567 ORTHO05D000767 1.8e-20 102.1 68 80.9
Carub.0007s2348 Capsella rubella HOM05D000567 ORTHO05D000767 4.0e-12 74.3 69 60.9
AT4G17880 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 1.2e-11 72.8 69 60.9
AL7G36650 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 2.6e-11 71.6 69 60.9
BcaNung00047 Brassica carinata HOM05D000567 ORTHO05D000767 3.4e-11 71.2 73 60.3
A01p09930 Brassica napus HOM05D000567 ORTHO05D000767 4.5e-11 70.9 71 60.6
CARHR174740 Cardamine hirsuta HOM05D000567 ORTHO05D000767 5.8e-11 70.5 71 59.2
BraA01t00937Z Brassica rapa HOM05D000567 ORTHO05D000767 7.6e-11 70.1 71 60.6
AL8G11580 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 2.2e-10 68.6 73 58.9
Aa31LG9G6130 Aethionema arabicum HOM05D000567 ORTHO05D000767 2.9e-10 68.2 72 62.5
AT5G46760 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 2.9e-10 68.2 73 58.9
Carub.0008s0116 Capsella rubella HOM05D000567 ORTHO05D000767 2.9e-10 68.2 71 60.6
BcaC09g51591 Brassica carinata HOM05D000567 ORTHO05D000767 3.8e-10 67.8 71 59.2
BolC1t01134H Brassica oleracea HOM05D000567 ORTHO05D000767 3.8e-10 67.8 71 59.2
Thhalv10000808m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 3.8e-10 67.8 71 59.2
C01p11710 Brassica napus HOM05D000567 ORTHO05D000767 4.9e-10 67.4 71 59.2
CARHR224600 Cardamine hirsuta HOM05D000567 ORTHO05D000767 6.4e-10 67.0 69 59.4
Sp2g11570 Schrenkiella parvula HOM05D000567 ORTHO05D000767 6.4e-10 67.0 72 61.1
SpUn0036_0040 Schrenkiella parvula HOM05D000567 ORTHO05D000767 6.4e-10 67.0 72 61.1
BcaB07g30822 Brassica carinata HOM05D000567 ORTHO05D000767 8.4e-10 66.6 68 55.9
BcaC04g21685 Brassica carinata HOM05D000567 ORTHO05D000767 1.4e-09 65.9 68 55.9
C09p28850 Brassica napus HOM05D000567 ORTHO05D000767 1.4e-09 65.9 68 55.9
BolC9t55747H Brassica oleracea HOM05D000567 ORTHO05D000767 1.4e-09 65.9 68 55.9
BraA06t27438Z Brassica rapa HOM05D000567 ORTHO05D000767 1.4e-09 65.9 72 56.9
BcaC06g31449 Brassica carinata HOM05D000567 ORTHO05D000767 1.9e-09 65.5 72 56.9
A09p22520 Brassica napus HOM05D000567 ORTHO05D000767 1.9e-09 65.5 68 55.9
BcaC06g34350 Brassica carinata HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 55.6
C07p30060 Brassica napus HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 55.6
BolC7t43546H Brassica oleracea HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 55.6
Sp7g16240 Schrenkiella parvula HOM05D000567 ORTHO05D000767 2.4e-09 65.1 71 57.7
A06p45690 Brassica napus HOM05D000567 ORTHO05D000767 3.2e-09 64.7 72 55.6
Thhalv10024688m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 3.2e-09 64.7 68 55.9
BraA09t37859Z Brassica rapa HOM05D000567 ORTHO05D000767 5.4e-09 63.9 68 54.4
THA.LOC104806708 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 3.5e-08 61.2 72 56.9
THA.LOC104827760 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 1.8e-07 58.9 70 58.6
BcaC05g27837 Brassica carinata HOM05D000567 ORTHO05D000767 3.0e-07 58.2 71 53.5
C05p38350 Brassica napus HOM05D000567 ORTHO05D000767 3.0e-07 58.2 71 53.5
BolC5t32569H Brassica oleracea HOM05D000567 ORTHO05D000767 3.0e-07 58.2 71 53.5
PGSC0003DMG400001161 Solanum tuberosum HOM05D000567 ORTHO05D000767 3.0e-07 58.2 70 50.0
TPR.G1044 Trifolium pratense HOM05D000567 ORTHO05D000767 3.0e-07 58.2 80 46.2
A05p24680 Brassica napus HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
BraA05t21352Z Brassica rapa HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
BcaB07g32956 Brassica carinata HOM05D000567 ORTHO05D000767 6.7e-07 57.0 71 52.1
COL.COLO4_17030 Corchorus olitorius HOM05D000567 ORTHO05D000767 8.7e-07 56.6 72 48.6
BcaB03g12193 Brassica carinata HOM05D000567 ORTHO05D000767 1.9e-06 55.5 72 51.4
Gohir.D09G193200 Gossypium hirsutum HOM05D000567 ORTHO05D000767 1.9e-06 55.5 72 45.8
Gorai.006G216700 Gossypium raimondii HOM05D000567 ORTHO05D000767 1.9e-06 55.5 72 45.8
Nitab4.5_0002539g0040 Nicotiana tabacum HOM05D000567 ORTHO05D000767 1.9e-06 55.5 68 42.6
CANSAT21G0209 Cannabis sativa HOM05D000567 ORTHO05D000767 2.5e-06 55.1 76 43.4
Nitab4.5_0000804g0160 Nicotiana tabacum HOM05D000567 ORTHO05D000767 2.5e-06 55.1 68 42.6
Atru.chr6.1707 Acer truncatum HOM05D000567 ORTHO05D000767 4.3e-06 54.3 76 46.1
BcaB03g13718 Brassica carinata HOM05D000567 ORTHO05D000767 4.3e-06 54.3 72 51.4
Cpa.g.sc71.72 Carica papaya HOM05D000567 ORTHO05D000767 4.3e-06 54.3 75 42.7
Potri.001G142200 Populus trichocarpa HOM05D000567 ORTHO05D000767 4.3e-06 54.3 72 44.4
QL12p005169 Quercus lobata HOM05D000567 ORTHO05D000767 4.3e-06 54.3 41 70.7
MSTRG.1986 Avicennia marina HOM05D000567 ORTHO05D000767 5.6e-06 53.9 47 61.7
Sopen08g001070 Solanum pennellii HOM05D000567 ORTHO05D000767 5.6e-06 53.9 70 48.6
MSTRG.12159 Avicennia marina HOM05D000567 ORTHO05D000767 7.4e-06 53.5 41 68.3
Ca_06081_v3 Cicer arietinum L. HOM05D000567 ORTHO05D000767 7.4e-06 53.5 77 41.6
Duzib084G0664 Durio zibethinus HOM05D000567 ORTHO05D000767 7.4e-06 53.5 41 63.4
Gohir.A09G201500 Gossypium hirsutum HOM05D000567 ORTHO05D000767 7.4e-06 53.5 72 45.8
Rhsim07G0127300 Rhododendron simsii HOM05D000567 ORTHO05D000767 7.4e-06 53.5 72 44.4
Sp1g28280 Schrenkiella parvula HOM05D000567 ORTHO05D000767 7.4e-06 53.5 71 47.9
Aa31LG2G13350 Aethionema arabicum HOM05D000567 ORTHO05D000767 9.6e-06 53.1 73 49.3
AT1G32640 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 9.6e-06 53.1 70 50.0
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 9.6e-06 53.1 71 47.9
Migut.E00934 Erythranthe guttata HOM05D000567 ORTHO05D000767 9.6e-06 53.1 72 47.2
Thhalv10007075m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 9.6e-06 53.1 72 48.6
Gohir.D12G210800 Gossypium hirsutum HOM05D000567 ORTHO05D000767 9.6e-06 53.1 71 45.1
Psat2g136720 Pisum sativum HOM05D000567 ORTHO05D000767 9.6e-06 53.1 50 60.0
Prupe.5G035400 Prunus persica HOM05D000567 ORTHO05D000767 9.6e-06 53.1 72 44.4


User provided reference genes

Program Settings