Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.7e-232 808.9 400 100.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.2e-204 716.5 387 91.0
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 7.6e-204 713.8 387 90.4
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 4.9e-203 711.1 387 90.2
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.9e-203 711.1 387 90.2
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.9e-203 711.1 387 90.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.1e-202 709.9 387 89.9
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-202 709.9 387 90.2
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-202 709.9 387 89.9
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.2e-202 708.0 387 89.7
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 9.3e-202 706.8 387 89.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.6e-201 706.1 387 89.7
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.0e-200 703.4 387 88.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.4e-194 681.0 387 84.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 7.9e-193 677.2 387 85.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.8e-192 676.0 387 83.5
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 7.4e-191 670.6 387 82.7
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.6e-190 669.5 387 83.5
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 2.1e-190 669.1 387 82.4
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.7e-190 668.3 387 83.5
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.1e-189 666.8 387 82.9
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 3.1e-189 665.2 387 82.4
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 5.3e-189 664.5 386 82.4
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.3e-189 664.5 387 81.7
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.9e-189 664.1 386 82.1
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.2e-188 663.3 387 81.7
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.2e-188 663.3 387 82.9
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.6e-188 662.1 386 81.6
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 2.6e-188 662.1 387 81.9
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 4.5e-188 661.4 385 82.6
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 4.5e-188 661.4 387 81.1
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 5.8e-188 661.0 387 81.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 5.8e-188 661.0 393 81.4
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 7.6e-188 660.6 387 82.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 7.6e-188 660.6 387 81.7
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 7.6e-188 660.6 387 80.9
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 7.6e-188 660.6 387 81.9
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.9e-187 658.7 387 82.2
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.8e-187 658.3 387 80.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.8e-187 658.3 384 81.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.8e-187 658.3 384 81.8
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 3.8e-187 658.3 387 81.7
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 4.9e-187 657.9 387 82.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.9e-187 657.9 386 81.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 6.5e-187 657.5 387 81.1
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 6.5e-187 657.5 387 81.7
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.1e-186 656.8 384 81.8
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.1e-186 656.8 387 81.7
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.1e-186 656.8 387 80.6
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.4e-186 656.4 387 81.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.9e-186 656.0 387 81.1
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.1e-186 654.1 387 81.7
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-185 653.3 388 81.4
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.2e-185 653.3 387 80.6
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.2e-185 653.3 387 81.1
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.6e-185 652.9 387 81.1
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.7e-185 652.1 384 80.2
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.7e-185 652.1 387 81.1
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.5e-185 651.7 387 80.4
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 3.5e-185 651.7 387 81.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 3.5e-185 651.7 387 80.1
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 7.9e-185 650.6 387 81.4
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 7.9e-185 650.6 387 80.1
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.0e-184 650.2 384 80.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.0e-184 648.7 405 78.0
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 5.1e-184 647.9 377 82.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 5.7e-183 644.4 414 76.6
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.4e-183 644.0 387 80.6
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.6e-182 642.9 390 78.7
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.1e-181 640.2 386 80.1
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 5.3e-181 637.9 386 79.5
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 9.0e-181 637.1 391 79.3
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.2e-180 636.7 376 80.6
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.4e-180 635.2 384 79.7
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 7.1e-178 627.5 384 78.1
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.0e-176 623.6 385 77.7
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.9e-176 621.7 385 76.9
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 6.7e-176 620.9 370 80.0
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 2.5e-175 619.0 409 73.3
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.3e-174 616.7 387 77.8
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 4.8e-174 614.8 408 74.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 4.8e-174 614.8 383 77.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.8e-173 612.8 386 75.4
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.8e-173 612.8 387 75.2
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.0e-171 607.1 384 76.3
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.2e-171 605.9 385 75.6
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 8.5e-171 604.0 380 77.6
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 3.2e-170 602.1 423 71.6
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 6.9e-165 584.3 387 73.1
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.9e-165 584.3 437 69.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 5.9e-164 581.3 387 73.9
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 9.4e-162 573.9 387 73.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 6.5e-155 551.2 326 82.5
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.5e-154 550.1 417 67.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.2e-154 548.9 486 59.9
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.7e-153 545.8 326 79.4
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.7e-150 536.6 386 68.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.4e-149 532.7 383 67.1
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.1e-138 497.3 359 68.8
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 5.7e-135 485.0 388 62.4
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 7.5e-135 484.6 383 61.6
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.3e-134 483.8 350 71.4
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.7e-131 473.4 384 58.9
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.1e-105 386.7 215 86.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.4e-104 384.0 211 87.2
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.4e-104 384.0 234 79.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.1e-99 365.5 387 51.7
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 5.1e-83 312.4 172 86.0
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 2.1e-65 253.8 147 78.2
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.1e-61 241.5 189 65.6
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 6.7e-59 232.3 147 71.4
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 8.5e-30 135.6 84 75.0
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.1e-24 118.6 84 69.0
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.2e-18 98.6 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 2.0e-15 87.8 49 83.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.7e-12 76.6 49 71.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.7e-12 76.6 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.0e-11 73.6 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 5.4e-08 63.2 40 75.0


User provided reference genes

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