Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 5.1e-184 647.9 402 100.0
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 9.8e-135 484.2 402 79.6
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 9.2e-133 477.6 405 78.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.3e-131 473.8 329 80.2
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.3e-126 457.2 319 80.3
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 3.7e-126 455.7 320 80.0
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 8.3e-126 454.5 390 78.5
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 4.1e-125 452.2 317 79.8
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 4.1e-125 452.2 317 79.8
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 2.5e-122 443.0 393 76.6
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 8.1e-105 384.8 299 68.9
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.1e-104 384.4 306 81.4
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 9.0e-104 381.3 299 69.9
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.2e-103 380.9 289 71.3
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.5e-103 380.6 300 69.0
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 4.9e-102 375.6 302 66.6
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.4e-102 375.2 290 66.9
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.4e-102 375.2 289 66.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 8.4e-102 374.8 289 66.8
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.1e-101 374.4 339 67.8
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.4e-101 373.2 309 68.0
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 7.1e-101 371.7 289 65.7
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 9.3e-101 371.3 331 65.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.6e-100 370.5 327 67.3
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 3.0e-99 366.3 288 67.4
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.9e-99 365.9 300 67.0
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 3.9e-99 365.9 301 68.4
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 6.7e-99 365.2 299 67.2
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.5e-98 363.2 294 66.0
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.1e-97 360.1 309 68.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 2.8e-97 359.8 309 68.3
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.8e-97 359.8 329 63.2
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 3.6e-97 359.4 325 66.2
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.8e-97 359.0 302 66.2
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 4.0e-96 355.9 315 62.5
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 5.3e-96 355.5 323 67.2
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 6.9e-96 355.1 317 61.5
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.5e-95 354.0 272 70.6
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.6e-95 353.2 300 64.7
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 3.4e-95 352.8 301 65.1
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 4.5e-95 352.4 302 62.6
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 7.6e-95 351.7 300 60.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.7e-94 350.5 316 62.7
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 2.9e-94 349.7 332 61.7
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.9e-94 349.7 244 73.8
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 6.4e-94 348.6 298 65.8
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 6.4e-94 348.6 297 64.3
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 6.4e-94 348.6 295 63.4
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.4e-93 347.4 336 56.5
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.4e-93 346.7 303 63.4
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 2.4e-93 346.7 335 60.3
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 7.1e-93 345.1 284 72.2
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 9.3e-93 344.7 261 70.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 3.5e-92 342.8 306 61.1
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 4.6e-92 342.4 268 69.8
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.3e-91 340.9 283 64.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.3e-91 340.9 293 62.8
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.8e-91 340.5 304 62.2
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 3.0e-91 339.7 303 61.1
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 3.0e-91 339.7 302 63.2
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.5e-90 337.4 333 59.2
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.9e-90 337.0 273 68.5
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 3.3e-90 336.3 323 59.4
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 2.1e-89 333.6 304 59.2
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.1e-88 331.3 304 58.6
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.4e-88 330.1 223 78.5
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.1e-88 329.7 244 72.5
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 2.0e-87 327.0 239 72.0
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 4.5e-87 325.9 229 75.5
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.2e-84 317.8 325 56.0
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.7e-84 316.6 214 74.3
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.7e-83 312.0 271 64.9
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 3.7e-81 306.2 293 61.4
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 6.3e-81 305.4 239 65.7
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 6.9e-80 302.0 235 69.8
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.1e-76 290.4 320 56.9
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.3e-75 287.7 222 67.6
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 9.1e-72 275.0 212 67.9
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 6.9e-64 248.8 157 75.2
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.6e-60 237.7 204 66.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.9e-59 233.0 191 69.1
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 4.8e-57 226.1 159 71.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.1e-53 214.9 198 62.6
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.6e-52 211.1 242 52.5
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 2.1e-52 210.7 256 50.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 4.7e-52 209.5 199 62.8
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.4e-48 198.0 202 61.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.8e-48 197.6 167 65.9
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 4.8e-41 172.9 234 46.6
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 9.1e-40 168.7 232 47.4
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 9.5e-37 158.7 240 37.1
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.0e-30 136.3 115 73.9
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.1e-28 131.0 152 44.7
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 7.8e-23 112.5 73 86.3


User provided reference genes

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