Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.1e-118 429.9 209 100.0
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.1e-112 409.1 209 94.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 7.9e-112 407.1 209 93.8
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 6.7e-111 404.1 209 92.8
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 8.8e-111 403.7 207 93.7
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 1.1e-110 403.3 207 93.7
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.0e-110 402.5 209 92.3
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 4.4e-110 401.4 207 92.8
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 9.7e-110 400.2 207 92.8
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 9.7e-110 400.2 208 93.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 4.8e-109 397.9 209 90.4
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 5.3e-108 394.4 209 91.4
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 89.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 88.0
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 2.3e-103 379.0 209 86.6
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 86.6
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.2
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 84.7
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 86.1
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 85.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 85.6
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 85.2
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 86.1
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 86.1
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.2
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.2
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.6
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.2
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.6
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 84.2
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 83.7
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 85.2
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 85.6
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 85.6
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 85.2
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 85.2
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 83.3
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 85.2
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 83.3
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 84.7
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 84.2
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 83.7
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 83.3
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 84.2
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 84.7
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 84.2
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.7
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 85.6
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 82.8
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 83.3
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 82.8
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 82.3
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 83.7
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 83.3
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 83.3
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 83.3
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 82.3
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 83.7
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 81.3
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.5e-98 360.9 209 82.8
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.8
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-97 360.1 221 80.1
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.5e-97 359.8 209 82.3
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.9e-97 359.4 209 82.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.9e-97 359.4 208 80.8
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 82.8
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 80.9
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 4.2e-97 358.2 208 81.2
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.2e-96 356.7 225 77.3
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.6e-96 356.3 209 81.3
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 4.7e-96 354.8 209 80.4
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 4.7e-96 354.8 209 80.9
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 79.9
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 81.3
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 6.1e-96 354.4 230 77.4
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 6.1e-96 354.4 243 73.7
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.4e-95 353.2 209 80.4
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.0e-95 352.1 230 76.5
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.0e-94 349.4 240 73.8
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 3.3e-94 348.6 209 80.4
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 4.4e-94 348.2 209 80.9
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 2.8e-93 345.5 209 79.4
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 2.8e-93 345.5 209 78.0
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.8e-92 342.8 209 78.9
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.0e-90 337.0 190 84.7
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 1.7e-90 336.3 191 86.4
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.9e-90 335.5 187 87.2
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.5e-89 333.2 209 77.0
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.5e-89 333.2 187 86.1
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 2.5e-89 332.4 190 82.6
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 7.2e-89 330.9 206 74.8
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.2e-88 330.1 209 76.1
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.2e-88 330.1 187 82.9
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.8e-87 326.2 193 81.3
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 8.8e-87 323.9 185 83.8
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 1.2e-86 323.6 288 60.4
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 2.8e-85 318.9 209 71.8
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.8e-85 318.9 208 71.2
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.1e-84 315.5 165 92.1
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 4.1e-84 315.1 209 74.2
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 9.1e-84 313.9 189 79.4
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 5.0e-82 308.1 208 70.7
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 4.9e-77 291.6 205 65.4
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 6.3e-77 291.2 211 71.6
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.0e-74 283.9 197 71.1
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 5.6e-73 278.1 165 79.4
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 6.4e-69 264.6 150 83.3
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 6.0e-67 258.1 204 61.8
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.2e-64 250.4 204 59.3
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 2.8e-64 249.2 179 67.6
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 3.4e-62 242.3 209 62.2
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 6.4e-61 238.0 210 55.7
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 7.0e-60 234.6 167 67.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.1e-59 233.0 135 80.0
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.3e-53 213.8 206 52.4
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 3.1e-47 192.6 206 48.5
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 6.8e-47 191.4 152 61.8
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 4.3e-41 172.2 207 39.6
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.9e-37 158.7 135 53.3
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 5.4e-36 155.2 149 56.4
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 3.9e-34 149.1 84 84.5
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 4.3e-33 145.6 126 61.9
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.1e-32 143.3 135 50.4
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 6.2e-32 141.7 84 79.8
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.2e-28 129.4 226 35.8
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.1e-24 116.7 74 75.7
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 4.3e-17 92.4 83 60.2
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.8e-16 89.7 43 93.0


User provided reference genes

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