Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 3.4e-92 341.7 173 100.0
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 1.3e-75 286.6 173 84.4
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 1.3e-75 286.6 173 84.4
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 3.2e-74 282.0 176 82.4
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 1.2e-73 280.0 172 84.3
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 6.0e-73 277.7 172 82.6
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 2.3e-72 275.8 175 82.3
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 2.3e-72 275.8 175 82.3
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 2.3e-72 275.8 175 82.3
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 8.7e-72 273.9 172 80.8
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 8.7e-72 273.9 174 81.0
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 8.7e-72 273.9 174 81.0
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 1.9e-71 272.7 173 80.9
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 2.5e-71 272.3 164 82.3
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 4.3e-71 271.6 171 81.3
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 4.3e-71 271.6 172 80.8
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 9.0e-69 263.8 177 80.2
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 1.2e-68 263.5 177 79.7
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 1.2e-68 263.5 177 79.7
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 4.5e-68 261.5 178 79.8
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 1.3e-67 260.0 178 78.7
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 1.3e-67 260.0 164 78.7
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 2.2e-67 259.2 155 81.3
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 2.4e-66 255.8 173 74.0
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 3.2e-66 255.4 176 77.8
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 1.2e-65 253.4 173 74.6
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 2.7e-65 252.3 175 76.6
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 7.9e-65 250.8 173 71.7
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-64 250.0 173 72.8
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.3e-64 250.0 173 72.8
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.8e-64 249.6 163 76.1
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.3e-64 249.2 173 73.4
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 3.0e-64 248.8 180 72.2
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 6.7e-64 247.7 174 73.6
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.1e-63 246.9 156 76.3
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 3.3e-63 245.4 180 68.9
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 4.3e-63 245.0 153 77.1
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-62 243.4 166 73.5
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 2.1e-62 242.7 178 74.2
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 2.1e-62 242.7 176 69.3
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 3.7e-62 241.9 181 68.5
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 3.7e-62 241.9 173 71.7
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 3.7e-62 241.9 172 69.8
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 3.7e-62 241.9 179 67.0
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 3.7e-62 241.9 179 67.0
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 4.8e-62 241.5 172 69.8
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 1.1e-61 240.4 173 70.5
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 1.8e-61 239.6 173 70.5
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 1.8e-61 239.6 164 74.4
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 1.8e-61 239.6 172 69.8
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 1.8e-61 239.6 172 69.8
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 4.0e-61 238.4 177 68.9
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 5.3e-61 238.0 173 69.4
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 6.9e-61 237.7 173 69.4
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 2.0e-60 236.1 173 69.9
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 5.8e-60 234.6 163 73.6
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 4.9e-59 231.5 177 68.9
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 1.4e-58 229.9 130 83.8
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 1.9e-58 229.6 157 75.2
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 2.5e-58 229.2 177 68.9
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 2.5e-58 229.2 215 59.1
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 3.2e-58 228.8 175 67.4
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 4.2e-58 228.4 172 66.9
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 5.5e-58 228.0 175 68.6
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 7.1e-58 227.6 147 79.6
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 7.1e-58 227.6 167 72.5
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 7.1e-58 227.6 182 68.1
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 9.3e-58 227.3 181 66.9
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 1.6e-57 226.5 182 67.6
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 2.1e-57 226.1 170 68.8
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 2.7e-57 225.7 177 68.4
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 3.5e-57 225.3 178 65.7
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 7.9e-57 224.2 162 69.8
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 1.0e-56 223.8 181 66.9
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.0e-56 223.8 178 64.6
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.3e-56 223.4 130 80.0
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 1.3e-56 223.4 177 66.1
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 1.8e-56 223.0 173 67.6
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 3.0e-56 222.2 179 66.5
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 6.7e-56 221.1 181 65.2
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 6.7e-56 221.1 196 62.8
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 8.7e-56 220.7 176 66.5
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 1.1e-55 220.3 152 71.7
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 1.9e-55 219.5 165 67.9
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 2.5e-55 219.2 183 66.1
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.5e-55 219.2 188 64.4
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 4.3e-55 218.4 163 69.3
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 4.3e-55 218.4 175 66.3
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 5.7e-55 218.0 159 69.2
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 7.4e-55 217.6 165 67.9
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 1.3e-54 216.9 150 72.7
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 2.1e-54 216.1 177 65.0
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 2.1e-54 216.1 182 63.2
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 8.2e-54 214.2 174 63.8
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 8.2e-54 214.2 176 64.8
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 1.1e-53 213.8 156 68.6
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 1.4e-53 213.4 184 59.8
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 1.4e-53 213.4 176 64.8
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 5.3e-53 211.5 173 65.9
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.5e-52 209.9 179 65.9
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.5e-52 208.4 126 77.8
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.3e-51 206.8 159 66.7
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 1.3e-51 206.8 133 73.7
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 1.7e-51 206.5 175 62.9
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 3.8e-51 205.3 179 64.8
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 6.5e-51 204.5 130 76.2
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 3.2e-50 202.2 130 74.6
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 3.2e-50 202.2 170 61.2
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 3.2e-50 202.2 183 61.7
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.1e-49 199.5 263 45.2
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 1.0e-48 197.2 131 77.1
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 3.9e-48 195.3 263 44.5
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 2.5e-47 192.6 149 65.8
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 2.5e-47 192.6 146 65.1
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 4.3e-47 191.8 173 60.7
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 9.7e-47 190.7 168 61.9
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 4.8e-46 188.3 130 73.8
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.6e-44 182.6 179 54.7
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 2.6e-44 182.6 125 72.8
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 5.9e-44 181.4 179 55.9
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.3e-43 180.3 171 56.1
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.7e-43 179.9 174 62.6
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 5.5e-42 174.9 183 56.8
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 1.8e-40 169.9 187 53.5
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 1.5e-39 166.8 129 65.1
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 2.5e-39 166.0 163 53.4
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.8e-37 159.8 87 90.8
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.5e-36 155.2 87 87.4
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 3.6e-33 145.6 112 59.8
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 1.4e-32 143.7 87 78.2
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 2.2e-30 136.3 82 80.5
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.1e-29 134.0 82 78.0
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 5.9e-28 128.3 82 79.3
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 7.7e-28 127.9 86 76.7
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 1.5e-26 123.6 82 75.6
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 1.5e-26 123.6 100 56.0
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 1.8e-24 116.7 102 54.9
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 2.3e-24 116.3 87 70.1
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.6e-23 112.8 98 65.3
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 6.1e-17 91.7 54 81.5
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 1.4e-16 90.5 54 81.5
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 8.3e-14 81.3 90 50.0
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 3.8e-11 72.4 69 44.9
FvH4_3g22200 Fragaria vesca HOM05D000371 ORTHO05D006340 1.6e-09 67.0 93 49.5
FAN11G2388 Fragaria x ananassa HOM05D000371 ORTHO05D006340 1.6e-09 67.0 93 48.4
RcHm_v2.0_Chr5g0038161 Rosa chinensis HOM05D000371 ORTHO05D006340 1.6e-09 67.0 117 43.6
FAN16G2982 Fragaria x ananassa HOM05D000371 ORTHO05D006340 8.0e-09 64.7 93 49.5
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.8e-08 63.5 72 54.2
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 3.7e-06 55.8 62 40.3


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