Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 7.4e-62 240.4 121 100.0
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 4.1e-44 181.4 119 74.8
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 7.0e-44 180.6 119 72.3
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 5.0e-42 174.5 119 70.6
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 6.5e-42 174.1 118 72.0
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.5e-41 172.2 118 70.3
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 5.5e-41 171.0 119 68.9
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.2e-40 169.9 118 70.3
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.2e-40 169.9 119 69.7
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 3.6e-40 168.3 119 68.1
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 3.6e-40 168.3 119 68.1
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.4e-39 166.4 118 69.5
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 9.8e-38 160.2 118 62.7
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 2.5e-33 145.6 118 57.6
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.6e-32 142.9 117 56.4
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.8e-32 142.1 121 57.9
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.8e-32 142.1 121 57.9
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 6.1e-32 141.0 102 68.6
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 6.1e-32 141.0 119 54.6
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 8.0e-32 140.6 118 54.2
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 5.2e-31 137.9 118 55.1
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 6.8e-31 137.5 120 57.5
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.5e-30 136.3 122 54.1
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 3.4e-30 135.2 118 55.1
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 3.4e-30 135.2 119 57.1
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 4.4e-30 134.8 119 58.8
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 7.5e-30 134.0 118 60.2
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 9.8e-30 133.7 119 56.3
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.9e-29 132.1 119 57.1
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.7e-29 131.7 119 57.1
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 3.7e-29 131.7 118 56.8
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.9e-29 131.3 118 58.5
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 6.4e-29 131.0 117 53.8
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 8.3e-29 130.6 117 53.8
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 8.3e-29 130.6 119 53.8
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 8.3e-29 130.6 119 53.8
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.1e-28 130.2 117 53.0
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.1e-28 130.2 118 52.5
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.4e-28 129.0 121 51.2
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.4e-28 129.0 118 49.2
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.2e-28 128.6 118 51.7
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 4.1e-28 128.3 117 53.8
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.1e-28 128.3 119 53.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 5.4e-28 127.9 117 54.7
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-27 126.7 121 49.6
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.2e-27 126.7 119 54.6
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 4.6e-27 124.8 121 49.6
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.8e-27 124.0 119 47.9
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.0e-26 123.6 115 51.3
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.0e-26 123.6 117 50.4
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 2.3e-26 122.5 121 48.8
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 2.3e-26 122.5 122 51.6
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 3.0e-26 122.1 122 46.7
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 5.0e-26 121.3 127 48.8
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 8.6e-26 120.6 109 57.8
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.1e-25 120.2 118 50.8
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.9e-25 119.4 118 48.3
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 5.6e-25 117.9 123 46.3
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 5.6e-25 117.9 118 48.3
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 7.3e-25 117.5 120 46.7
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 7.3e-25 117.5 116 50.9
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 9.5e-25 117.1 115 47.8
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.6e-24 116.3 114 49.1
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.1e-24 115.9 116 50.0
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 2.8e-24 115.5 114 43.0
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 3.6e-24 115.2 109 48.6
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 4.7e-24 114.8 116 50.9
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 4.7e-24 114.8 130 45.4
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 6.2e-24 114.4 123 44.7
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.0e-23 113.6 115 50.4
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.8e-23 112.8 118 47.5
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.1e-23 112.1 118 48.3
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 3.1e-23 112.1 117 49.6
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 6.8e-23 110.9 116 48.3
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 6.8e-23 110.9 116 48.3
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 8.9e-23 110.5 119 43.7
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 2.6e-22 109.0 116 48.3
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 2.6e-22 109.0 116 50.0
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 4.4e-22 108.2 116 47.4
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 5.8e-22 107.8 114 46.5
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.7e-21 106.3 111 48.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.2e-21 105.9 118 46.6
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.1e-20 103.6 96 54.2
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 2.4e-20 102.4 117 44.4
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 2.7e-19 99.0 122 41.8
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 3.5e-19 98.6 117 43.6
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 1.0e-18 97.1 104 47.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.7e-18 96.3 116 44.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.0e-18 95.5 140 36.4
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.9e-18 95.1 117 47.0
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.6e-18 94.4 126 39.7
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.6e-18 94.0 121 43.0
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 8.6e-18 94.0 120 43.3
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-17 93.6 103 46.6
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 3.3e-17 92.0 126 38.9
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 3.3e-17 92.0 117 41.9
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.2e-16 90.1 94 52.1
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 3.6e-16 88.6 93 48.4
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 6.8e-15 84.3 99 44.4
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.9e-15 84.0 124 37.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.9e-15 84.0 124 37.1
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.9e-15 84.0 126 36.5
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.3e-13 80.1 122 38.5
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-13 80.1 122 38.5
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.1e-08 60.8 99 36.4
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 2.6e-06 55.8 90 37.8


User provided reference genes

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