Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G12680 Aethionema arabicum HOM05D011318 ORTHO05D013413 1.3e-144 516.5 285 100.0
AL5G39620 Arabidopsis lyrata HOM05D011318 ORTHO05D013413 1.8e-37 160.6 323 36.2
AT3G57970 Arabidopsis thaliana HOM05D011318 ORTHO05D013413 5.3e-34 149.1 269 35.3
BcaC07g40170 Brassica carinata HOM05D011318 ORTHO05D013413 1.2e-33 147.9 258 32.6
Carub.0005s2481 Capsella rubella HOM05D011318 ORTHO05D013413 1.5e-33 147.5 329 34.3
Thhalv10006402m.g Eutrema salsugineum HOM05D011318 ORTHO05D013413 1.3e-32 144.4 273 34.8
C08p33540 Brassica napus HOM05D011318 ORTHO05D013413 1.2e-30 137.9 328 29.3
BraA09t40526Z Brassica rapa HOM05D011318 ORTHO05D013413 1.0e-29 134.8 334 29.0
A09p50790 Brassica napus HOM05D011318 ORTHO05D013413 3.9e-29 132.9 335 28.7
BolC8t50949H Brassica oleracea HOM05D011318 ORTHO05D013413 1.5e-28 131.0 334 28.7
BcaC07g40167 Brassica carinata HOM05D011318 ORTHO05D013413 2.0e-28 130.6 299 29.8
Sp5g04750 Schrenkiella parvula HOM05D011318 ORTHO05D013413 1.7e-27 127.5 283 30.0
THA.LOC104824469 Tarenaya hassleriana HOM05D011318 ORTHO05D013413 1.0e-21 108.2 249 32.9
BcaNung05747 Brassica carinata HOM05D011318 ORTHO05D013413 3.9e-21 106.3 128 39.1
BcaNung05749 Brassica carinata HOM05D011318 ORTHO05D013413 3.9e-21 106.3 128 39.1
THA.LOC104804890 Tarenaya hassleriana HOM05D011318 ORTHO05D013413 6.3e-19 99.0 290 31.7
Aa31LG10G12670 Aethionema arabicum HOM05D010123 ORTHO05D012290 1.8e-13 80.9 219 25.1
AL5G39610 Arabidopsis lyrata HOM05D010123 ORTHO05D012290 1.5e-12 77.8 195 26.7
BcaC02g09975 Brassica carinata HOM05D010123 ORTHO05D012290 5.7e-12 75.9 227 25.1
BcaC02g09978 Brassica carinata HOM05D010123 ORTHO05D012290 5.7e-12 75.9 227 25.1
C04p34410 Brassica napus HOM05D010123 ORTHO05D012290 5.7e-12 75.9 227 25.1
BolC4t25003H Brassica oleracea HOM05D010123 ORTHO05D012290 5.7e-12 75.9 227 25.1
BraA04t16006Z Brassica rapa HOM05D010123 ORTHO05D012290 5.7e-12 75.9 206 26.2
A07p23750 Brassica napus HOM05D010123 ORTHO05D012290 1.3e-11 74.7 221 25.8
Aa31LG10G12660 Aethionema arabicum HOM05D010123 ORTHO05D012290 1.7e-11 74.3 220 25.0
AT3G57960 Arabidopsis thaliana HOM05D010123 ORTHO05D012290 2.8e-11 73.6 195 26.7
BcaB02g07564 Brassica carinata HOM05D010123 ORTHO05D012290 6.3e-11 72.4 204 25.5
A04p02820 Brassica napus HOM05D010123 ORTHO05D012290 1.1e-10 71.6 233 25.3
Carub.0005s2480 Capsella rubella HOM05D010123 ORTHO05D012290 4.1e-10 69.7 193 28.0
C06p24980 Brassica napus HOM05D010123 ORTHO05D012290 7.0e-10 68.9 212 24.5
BolC6t37650H Brassica oleracea HOM05D010123 ORTHO05D012290 7.0e-10 68.9 212 24.5
BcaC08g44881 Brassica carinata HOM05D010123 ORTHO05D012290 9.1e-10 68.6 219 25.1
Thhalv10020983m.g Eutrema salsugineum HOM05D001227 ORTHO05D001082 4.5e-09 66.2 205 25.4
BcaB04g21094 Brassica carinata HOM05D001227 ORTHO05D001082 5.9e-09 65.9 216 24.5
BcaB02g08286 Brassica carinata HOM05D010123 ORTHO05D012290 1.3e-08 64.7 232 24.6
AT3G12140 Arabidopsis thaliana HOM05D001227 ORTHO05D001082 6.5e-08 62.4 199 24.1
BolC1t05262H Brassica oleracea HOM05D001227 ORTHO05D001082 6.5e-08 62.4 211 23.7
Thhalv10014235m.g Eutrema salsugineum HOM05D001227 ORTHO05D001082 6.5e-08 62.4 214 22.9
CARHR086710 Cardamine hirsuta HOM05D001227 ORTHO05D001082 1.5e-07 61.2 199 24.1
BcaC09g48216 Brassica carinata HOM05D001227 ORTHO05D001082 1.9e-07 60.8 196 23.5
Carub.0003s1149 Capsella rubella HOM05D001227 ORTHO05D001082 1.9e-07 60.8 199 23.6
BcaC01g04063 Brassica carinata HOM05D001227 ORTHO05D001082 3.2e-07 60.1 205 24.4
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 3.2e-07 60.1 205 24.4
CARHR206400 Cardamine hirsuta HOM05D001227 ORTHO05D001082 4.2e-07 59.7 208 26.0
AUR62012044 Chenopodium quinoa HOM05D001227 ORTHO05D001082 4.2e-07 59.7 221 24.4
AL3G23790 Arabidopsis lyrata HOM05D001227 ORTHO05D001082 5.5e-07 59.3 199 23.6
Sp3g10370 Schrenkiella parvula HOM05D001227 ORTHO05D001082 7.2e-07 58.9 205 23.9
Medtr1g053905 Medicago truncatula HOM05D001227 ORTHO05D001082 9.4e-07 58.5 212 22.2
BcaB04g18695 Brassica carinata HOM05D001227 ORTHO05D001082 1.6e-06 57.8 205 24.4
Atru.chr8.1084 Acer truncatum HOM05D001227 ORTHO05D001082 2.1e-06 57.4 222 22.5
THA.LOC104799300 Tarenaya hassleriana HOM05D001227 ORTHO05D001082 2.1e-06 57.4 221 24.4
BraA10t45002Z Brassica rapa HOM05D001227 ORTHO05D001082 2.7e-06 57.0 207 22.2
CsaV3_3G038920 Cucumis sativus L. HOM05D001227 ORTHO05D001082 2.7e-06 57.0 235 21.7
BcaC06g32543 Brassica carinata HOM05D001227 ORTHO05D001082 3.6e-06 56.6 205 22.9
Thhalv10006494m.g Eutrema salsugineum HOM05D010123 ORTHO05D012290 3.6e-06 56.6 97 36.1
FvH4_6g22490 Fragaria vesca HOM05D001227 ORTHO05D001082 4.7e-06 56.2 217 22.1
A10p29600 Brassica napus HOM05D001227 ORTHO05D001082 6.1e-06 55.8 206 22.3
ClCG10G017440 Citrullus lanatus HOM05D001227 ORTHO05D001082 6.1e-06 55.8 235 22.1
THA.LOC104809928 Tarenaya hassleriana HOM05D001227 ORTHO05D001082 6.1e-06 55.8 215 24.7
Eucgr.B03648 Eucalyptus grandis HOM05D001227 ORTHO05D001082 8.0e-06 55.5 241 22.4


User provided reference genes

Program Settings