Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 3.6e-312 1074.3 522 100.0
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 6.0e-217 757.7 522 73.2
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 2.3e-216 755.7 516 72.9
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 2.3e-216 755.7 516 72.9
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 1.1e-215 753.4 516 72.5
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 3.6e-214 748.4 516 72.5
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 1.5e-212 743.0 518 71.8
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 4.9e-211 738.0 522 72.2
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 1.0e-208 730.3 522 71.5
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 1.3e-208 729.9 522 71.1
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 1.3e-208 729.9 516 70.9
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.8e-206 722.2 522 70.9
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 2.0e-204 716.1 522 69.7
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 1.0e-192 677.2 521 66.8
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 2.7e-185 652.5 531 61.4
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 8.7e-184 647.5 522 61.5
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 5.6e-183 644.8 522 60.9
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 4.5e-180 635.2 526 60.8
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 4.5e-180 635.2 531 61.0
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 4.9e-179 631.7 517 60.7
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 3.5e-177 625.5 517 60.2
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 3.5e-177 625.5 517 59.8
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 8.7e-176 620.9 517 59.8
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 1.1e-175 620.5 527 58.8
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 5.7e-175 618.2 534 58.4
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 6.3e-174 614.8 527 59.8
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.3e-173 611.7 566 56.4
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 1.2e-172 610.5 524 58.8
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 6.5e-171 604.7 530 57.0
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 1.9e-170 603.2 529 58.4
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 4.2e-170 602.1 517 58.0
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 3.6e-169 599.0 526 57.6
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 6.1e-169 598.2 527 56.7
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 1.0e-168 597.4 527 56.9
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 1.0e-168 597.4 530 57.5
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 1.1e-167 594.0 523 57.6
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.5e-167 593.6 548 56.4
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.7e-166 590.1 522 56.3
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 6.3e-166 588.2 522 57.1
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 6.3e-166 588.2 551 55.0
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 1.4e-165 587.0 525 56.4
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 3.1e-165 585.9 525 57.3
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 3.1e-165 585.9 532 55.5
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 1.3e-163 580.5 525 55.8
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 1.3e-163 580.5 525 56.4
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.4e-162 577.0 533 56.5
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 2.5e-162 576.2 540 56.7
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 3.2e-162 575.9 540 54.6
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 3.2e-162 575.9 525 55.2
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 9.4e-162 574.3 527 56.0
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 3.5e-156 555.8 527 54.1
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 7.7e-156 554.7 527 54.6
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 1.0e-155 554.3 522 53.4
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 1.3e-155 553.9 486 57.6
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.1e-154 550.8 517 54.7
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 9.4e-154 547.7 521 55.7
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 6.7e-152 541.6 517 54.4
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.7e-150 537.0 503 55.5
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 3.7e-150 535.8 526 52.7
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.4e-149 533.9 516 53.7
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 3.1e-149 532.7 503 54.9
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 9.1e-149 531.2 521 53.7
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 5.9e-148 528.5 522 53.3
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.9e-147 526.2 526 51.9
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 6.5e-147 525.0 526 51.7
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 8.5e-147 524.6 521 53.7
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.1e-146 524.2 521 52.6
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 9.4e-146 521.2 522 53.1
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 6.1e-145 518.5 474 56.8
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.8e-144 516.9 525 52.4
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 4.0e-144 515.8 520 51.7
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 1.7e-142 510.4 539 50.5
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 9.1e-141 504.6 503 51.5
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 1.0e-139 501.1 505 52.5
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 3.8e-139 499.2 517 51.1
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 5.0e-139 498.8 531 53.1
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 7.7e-132 474.9 524 51.0
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 7.5e-127 458.4 542 48.5
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 9.8e-127 458.0 413 55.4
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 2.8e-126 456.4 499 50.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.8e-121 439.9 480 50.6
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 2.6e-119 433.3 533 46.5
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 5.6e-114 415.6 554 40.1
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 3.6e-113 412.9 427 50.8
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 4.4e-111 406.0 464 48.9
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.1e-104 384.8 528 40.3
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.4e-104 384.4 528 40.3
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 4.9e-102 375.9 537 38.4
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.6e-100 370.9 486 46.3
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 6.0e-100 369.0 208 80.8
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 2.5e-98 363.6 208 79.8
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 2.6e-95 353.6 204 78.4
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.4e-93 347.8 202 78.7
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 3.2e-93 346.7 374 49.7
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 3.2e-93 346.7 482 42.5
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 3.5e-92 343.2 189 83.1
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.7e-91 340.9 202 77.2
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-82 311.6 315 50.2
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 5.3e-80 302.8 363 45.5
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.9e-78 297.0 408 41.4
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 6.7e-75 285.8 297 50.5
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 6.2e-73 279.3 252 54.8
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.4e-72 277.3 170 71.8
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.2e-71 275.0 243 56.4
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.5e-71 274.6 236 53.8
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 3.8e-70 270.0 263 54.4
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 7.1e-69 265.8 247 55.5
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.1e-66 258.5 153 78.4
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 2.5e-66 257.3 203 61.6
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.1e-65 254.2 235 51.9
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 6.5e-62 242.7 137 78.1
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.1e-56 225.3 212 52.8
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.6e-55 220.7 210 53.3
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 2.3e-51 207.6 181 58.6
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 6.7e-51 206.1 191 52.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 1.7e-49 201.4 177 53.7
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 5.5e-45 186.4 537 27.0
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.9e-38 164.1 97 76.3
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.1e-36 157.9 87 74.7
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 3.8e-30 137.1 283 33.9
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.6e-28 131.7 172 41.3
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.1e-28 131.3 76 75.0
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 3.6e-28 130.6 86 70.9
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 8.3e-25 119.4 70 71.4
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 2.4e-24 117.9 420 27.6
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 5.0e-14 83.6 49 77.6
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 8.6e-14 82.8 52 75.0
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 2.8e-12 77.8 92 44.6
Psat7g244360 Pisum sativum HOM05D000821 ORTHO05D000931 5.9e-07 60.1 50 54.0


User provided reference genes

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