Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11550 Aethionema arabicum HOM05D002974 ORTHO05D002992 2.1e-72 275.8 158 100.0
BcaC07g40124 Brassica carinata HOM05D002974 ORTHO05D002992 1.1e-33 147.1 122 68.9
Thhalv10006291m.g Eutrema salsugineum HOM05D002974 ORTHO05D002992 8.0e-32 141.0 123 65.9
C06p23750 Brassica napus HOM05D002974 ORTHO05D002992 1.0e-31 140.6 159 56.0
A09p49560 Brassica napus HOM05D002974 ORTHO05D002992 1.8e-31 139.8 122 66.4
BraA09t40409Z Brassica rapa HOM05D002974 ORTHO05D002992 1.8e-31 139.8 122 66.4
BcaB02g07639 Brassica carinata HOM05D002974 ORTHO05D002992 1.2e-30 137.1 158 56.3
C08p31950 Brassica napus HOM05D002974 ORTHO05D002992 1.5e-30 136.7 122 65.6
BolC8t50812H Brassica oleracea HOM05D002974 ORTHO05D002992 1.5e-30 136.7 122 65.6
BcaC08g44803 Brassica carinata HOM05D002974 ORTHO05D002992 5.7e-30 134.8 159 54.7
BolC6t37544H Brassica oleracea HOM05D002974 ORTHO05D002992 5.7e-30 134.8 159 54.7
Sp5g05850 Schrenkiella parvula HOM05D002974 ORTHO05D002992 9.8e-30 134.0 163 54.6
BraA04t16084Z Brassica rapa HOM05D002974 ORTHO05D002992 1.6e-27 126.7 125 60.0
BcaC02g09866 Brassica carinata HOM05D002974 ORTHO05D002992 3.5e-27 125.6 126 59.5
Thhalv10017346m.g Eutrema salsugineum HOM05D002974 ORTHO05D002992 4.6e-27 125.2 158 55.7
AT3G56710 Arabidopsis thaliana HOM05D002974 ORTHO05D002992 5.9e-27 124.8 123 60.2
Carub.0005s2345 Capsella rubella HOM05D002974 ORTHO05D002992 5.9e-27 124.8 127 60.6
BcaB02g08351 Brassica carinata HOM05D002974 ORTHO05D002992 1.0e-26 124.0 124 58.1
BraA04t16085Z Brassica rapa HOM05D002974 ORTHO05D002992 1.7e-26 123.2 123 56.9
CARHR166850 Cardamine hirsuta HOM05D002974 ORTHO05D002992 6.6e-26 121.3 166 50.6
AL5G38080 Arabidopsis lyrata HOM05D002974 ORTHO05D002992 7.3e-25 117.9 162 51.9
C04p35760 Brassica napus HOM05D002974 ORTHO05D002992 1.2e-24 117.1 118 58.5
A04p03510 Brassica napus HOM05D002974 ORTHO05D002992 2.1e-24 116.3 123 54.5
BcaB02g08350 Brassica carinata HOM05D002974 ORTHO05D002992 1.0e-23 114.0 126 58.7
BolC4t25224H Brassica oleracea HOM05D002974 ORTHO05D002992 1.4e-23 113.6 118 55.9
C03p27500 Brassica napus HOM05D002974 ORTHO05D002992 2.6e-22 109.4 159 51.6
BolC3t15126H Brassica oleracea HOM05D002974 ORTHO05D002992 2.6e-22 109.4 159 51.6
THA.LOC104824399 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 5.8e-22 108.2 161 46.0
BcaC01g05357 Brassica carinata HOM05D002974 ORTHO05D002992 7.5e-22 107.8 159 52.2
BolC4t21893H Brassica oleracea HOM05D002974 ORTHO05D002992 2.2e-21 106.3 159 54.7
BcaC02g12758 Brassica carinata HOM05D002974 ORTHO05D002992 3.7e-21 105.5 159 49.1
BraA05t19205Z Brassica rapa HOM05D002974 ORTHO05D002992 4.9e-21 105.1 158 43.0
AL4G39150 Arabidopsis lyrata HOM05D002974 ORTHO05D002992 1.9e-20 103.2 122 54.1
CARHR136270 Cardamine hirsuta HOM05D002974 ORTHO05D002992 1.9e-20 103.2 122 52.5
THA.LOC104816020 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.4e-20 102.8 125 49.6
BcaC07g39979 Brassica carinata HOM05D002974 ORTHO05D002992 3.2e-20 102.4 100 61.0
C04p02500 Brassica napus HOM05D002974 ORTHO05D002992 4.1e-20 102.1 159 55.3
Sp4g23480 Schrenkiella parvula HOM05D002974 ORTHO05D002992 1.2e-19 100.5 160 45.6
AT2G41180 Arabidopsis thaliana HOM05D002974 ORTHO05D002992 4.6e-19 98.6 123 53.7
BcaB01g03488 Brassica carinata HOM05D002974 ORTHO05D002992 7.8e-19 97.8 159 45.3
THA.LOC104803260 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.3e-18 97.1 156 44.2
A03p23100 Brassica napus HOM05D002974 ORTHO05D002992 3.9e-18 95.5 122 49.2
BraA03t11531Z Brassica rapa HOM05D002974 ORTHO05D002992 3.9e-18 95.5 122 49.2
Carub.0004s2349 Capsella rubella HOM05D002974 ORTHO05D002992 1.9e-17 93.2 128 51.6
A05p02090 Brassica napus HOM05D002974 ORTHO05D002992 5.2e-15 85.1 151 39.1
BcaC02g09865 Brassica carinata HOM05D002974 ORTHO05D002992 1.3e-10 70.5 41 82.9
BolC4t25225H Brassica oleracea HOM05D002974 ORTHO05D002992 1.3e-10 70.5 41 82.9
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.3e-10 70.5 117 42.7
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 6.6e-10 68.2 115 40.0
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 4.3e-09 65.5 145 35.2
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.6e-09 65.1 117 40.2
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 1.6e-08 63.5 124 40.3
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.6e-08 63.5 111 38.7
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 2.1e-08 63.2 130 36.9
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.8e-08 62.8 127 38.6
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 4.7e-08 62.0 123 42.3
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 6.2e-08 61.6 115 38.3
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 1.1e-07 60.8 143 35.0
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.1e-07 60.8 116 38.8
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 2.3e-07 59.7 51 66.7
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 4.0e-07 58.9 124 36.3
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 4.0e-07 58.9 121 37.2
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 5.2e-07 58.5 109 39.4
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 6.8e-07 58.2 135 36.3
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 6.8e-07 58.2 131 33.6
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 6.8e-07 58.2 118 38.1
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 6.8e-07 58.2 40 70.0
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 8.9e-07 57.8 39 71.8
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 8.9e-07 57.8 130 35.4
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 1.2e-06 57.4 118 37.3
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 1.5e-06 57.0 153 29.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 1.5e-06 57.0 39 76.9
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.5e-06 57.0 84 46.4
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.5e-06 57.0 39 71.8
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.0e-06 56.6 127 37.0
COL.COLO4_04711 Corchorus olitorius HOM05D002974 ORTHO05D002992 2.0e-06 56.6 109 39.4
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.0e-06 56.6 120 37.5
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.0e-06 56.6 116 39.7
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 2.0e-06 56.6 130 36.2
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.0e-06 56.6 74 47.3
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 2.0e-06 56.6 115 38.3
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 2.6e-06 56.2 39 71.8
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 2.6e-06 56.2 39 71.8
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 2.6e-06 56.2 35 71.4
Solyc10g078440.2 Solanum lycopersicum HOM05D015198 ORTHO05D002992 2.6e-06 56.2 77 44.2
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 3.4e-06 55.8 53 62.3
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 3.4e-06 55.8 59 57.6
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 4.4e-06 55.5 52 65.4
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 4.4e-06 55.5 134 29.1
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 7.6e-06 54.7 35 77.1
MELO3C004408.2 Cucumis melo HOM05D009218 ORTHO05D010069 7.6e-06 54.7 115 35.7
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 7.6e-06 54.7 38 71.1
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 7.6e-06 54.7 50 62.0
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 9.9e-06 54.3 122 32.0
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 9.9e-06 54.3 38 73.7


User provided reference genes

Program Settings