Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.0e-81 306.6 567 100.0
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 9.1e-78 295.4 567 98.8
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 2.1e-58 231.1 567 92.1
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 6.6e-52 209.5 112 91.1
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.3e-39 168.7 568 81.3
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 6.4e-39 166.4 113 70.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.9e-35 154.8 113 64.6
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 3.3e-35 154.1 113 65.5
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 2.1e-34 151.4 113 65.5
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.1e-34 151.4 113 65.5
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 3.6e-34 150.6 113 63.7
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 1.2e-32 145.6 113 61.9
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.5e-32 145.2 114 63.2
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 3.4e-32 144.1 113 61.9
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 7.6e-32 142.9 113 60.2
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.3e-31 142.1 113 59.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 2.2e-31 141.4 113 60.2
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 2.2e-31 141.4 113 60.2
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 4.9e-31 140.2 113 59.3
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.9e-31 140.2 113 57.5
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.4e-31 139.8 113 58.4
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 8.4e-31 139.4 113 59.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 8.4e-31 139.4 113 60.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.1e-30 139.0 113 58.4
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.1e-30 139.0 113 58.4
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.9e-30 138.3 106 61.3
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 2.4e-30 137.9 113 57.5
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 9.3e-30 136.0 114 62.3
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.7e-29 134.4 112 58.0
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 3.5e-29 134.0 113 57.5
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.5e-29 134.0 115 57.4
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.5e-29 134.0 112 57.1
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 4.6e-29 133.7 113 56.6
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.3e-28 132.1 113 54.9
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.0e-28 131.0 113 54.9
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.9e-28 130.6 107 60.7
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 3.9e-28 130.6 112 58.9
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 6.6e-28 129.8 114 59.6
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 6.6e-28 129.8 113 57.5
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 8.7e-28 129.4 115 58.3
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.5e-27 128.6 113 59.3
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 4.3e-27 127.1 113 53.1
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 4.3e-27 127.1 117 59.0
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 4.3e-27 127.1 113 52.2
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 7.3e-27 126.3 115 57.4
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.3e-27 126.3 113 55.8
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.6e-26 124.0 114 58.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 3.6e-26 124.0 113 54.9
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 4.8e-26 123.6 113 54.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 8.1e-26 122.9 114 54.4
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 8.1e-26 122.9 121 53.7
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-25 122.1 113 57.5
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-25 122.1 113 57.5
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 1.4e-25 122.1 114 55.3
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.4e-25 122.1 113 54.0
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.8e-25 121.7 114 54.4
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.4e-25 121.3 114 55.3
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 3.1e-25 120.9 113 57.5
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.1e-25 120.9 113 57.5
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.1e-25 120.9 113 56.6
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 5.3e-25 120.2 114 57.9
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 6.9e-25 119.8 111 53.2
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 9.0e-25 119.4 120 50.8
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.5e-24 118.6 113 54.0
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 2.0e-24 118.2 113 50.4
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.4e-24 117.5 121 51.2
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 2.2e-23 114.8 114 50.0
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.2e-23 114.8 121 50.4
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.2e-23 114.8 121 50.4
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.9e-23 114.4 113 49.6
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 2.4e-22 111.3 114 54.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 3.2e-22 110.9 119 51.3
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 4.2e-22 110.5 117 52.1
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 5.4e-22 110.2 120 51.7
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 7.1e-22 109.8 182 39.0
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 3.5e-21 107.5 120 51.7
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 6.0e-21 106.7 115 53.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.3e-20 105.5 118 52.5
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.3e-20 104.8 118 53.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 5.1e-20 103.6 124 46.8
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.1e-20 103.6 116 51.7
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 6.2e-18 96.7 125 45.6
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 8.1e-18 96.3 64 67.2
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 5.3e-17 93.6 184 34.8
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 9.0e-17 92.8 184 33.7
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 9.0e-17 92.8 184 34.8
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.2e-16 92.4 117 47.0
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.6e-16 91.3 58 63.8
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 3.4e-16 90.9 184 34.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 3.4e-16 90.9 184 34.2
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 4.5e-16 90.5 185 34.1
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 7.6e-16 89.7 185 34.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 7.6e-16 89.7 89 49.4
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.3e-15 89.0 184 46.7
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.3e-15 89.0 186 33.3
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 2.2e-15 88.2 186 32.8
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.2e-15 88.2 67 58.2
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.8e-15 87.4 186 32.8
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 3.2e-14 84.3 123 43.9
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 3.5e-13 80.9 68 61.8
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 3.5e-13 80.9 68 61.8
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.0e-12 79.3 110 40.9
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.8e-12 78.6 52 71.2
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 6.2e-10 70.1 76 46.1
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 8.1e-10 69.7 76 46.1
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 4.9e-07 60.5 36 69.4


User provided reference genes

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