Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044382 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.4e-240 835.9 412 100.0
AUR62009161 Chenopodium quinoa HOM05D000272 ORTHO05D000164 3.2e-229 798.1 430 93.7
AUR62022061 Chenopodium quinoa HOM05D000272 ORTHO05D000164 7.8e-204 713.8 430 85.1
EL10Ac2g03900 Beta vulgaris HOM05D000272 ORTHO05D000164 1.8e-160 569.7 434 71.7
Ah.11g044710 Amaranthus hybridus HOM05D000272 ORTHO05D000164 2.6e-146 522.7 427 66.0
Hund19465 Selenicereus undatus HOM05D000272 ORTHO05D000164 2.9e-118 429.5 446 54.5
Sc23g0005580 Simmondsia chinensis HOM05D000272 ORTHO05D000164 8.7e-62 241.9 441 38.1
Dinv27977 Davidia involucrata HOM05D000272 ORTHO05D000164 6.9e-59 232.3 471 36.5
Sabra06G0178900 Salix brachista HOM05D000272 ORTHO05D000164 4.5e-58 229.6 460 35.2
Dinv23432 Davidia involucrata HOM05D000272 ORTHO05D000164 1.4e-56 224.6 443 38.4
Manes.16G079300 Manihot esculenta HOM05D000272 ORTHO05D000164 1.9e-56 224.2 436 38.1
CiPaw.15G040000 Carya illinoinensis HOM05D000272 ORTHO05D000164 3.5e-55 219.9 448 35.5
COL.COLO4_21044 Corchorus olitorius HOM05D000272 ORTHO05D000164 4.6e-55 219.5 454 37.4
Ciclev10010212m.g Citrus clementina HOM05D000272 ORTHO05D000164 1.3e-54 218.0 458 36.2
Sabra18G0049400 Salix brachista HOM05D000272 ORTHO05D000164 1.8e-54 217.6 466 35.6
QL02p001377 Quercus lobata HOM05D000272 ORTHO05D000164 6.7e-54 215.7 439 36.7
Thecc.09G052700 Theobroma cacao HOM05D000272 ORTHO05D000164 1.9e-53 214.2 456 35.5
TAR383G0776 Trochodendron aralioides HOM05D000272 ORTHO05D000164 3.7e-52 209.9 488 34.4
TWI32G1306 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 6.3e-52 209.1 466 34.5
CSS0026906 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 2.4e-51 207.2 427 37.7
TAR624G0764 Trochodendron aralioides HOM05D000272 ORTHO05D000164 5.3e-51 206.1 451 35.0
Potri.006G230700 Populus trichocarpa HOM05D000272 ORTHO05D000164 2.0e-50 204.1 463 33.9
Prupe.1G413700 Prunus persica HOM05D000272 ORTHO05D000164 2.0e-50 204.1 437 35.2
Duzib187G0615 Durio zibethinus HOM05D000272 ORTHO05D000164 2.6e-50 203.8 454 35.5
Manes.03G047300 Manihot esculenta HOM05D000272 ORTHO05D000164 3.4e-50 203.4 420 36.9
Duzib150G1201 Durio zibethinus HOM05D000272 ORTHO05D000164 7.6e-50 202.2 445 36.0
CiPaw.16G029100 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.0e-49 201.8 439 36.2
TAR626G1020 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.3e-49 201.4 464 34.3
Duzib168G0983 Durio zibethinus HOM05D000272 ORTHO05D000164 6.5e-49 199.1 450 34.4
Gohir.D07G022500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.2e-47 194.9 443 34.8
Nn8g38910 Nelumbo nucifera HOM05D000272 ORTHO05D000164 2.1e-47 194.1 457 33.3
Gorai.001G023100 Gossypium raimondii HOM05D000272 ORTHO05D000164 3.6e-47 193.4 438 34.9
TWI34G1359 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 3.6e-47 193.4 363 38.6
Nn6g35429 Nelumbo nucifera HOM05D000272 ORTHO05D000164 7.9e-47 192.2 471 33.5
CSS0006877 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 8.7e-46 188.7 361 38.2
MD08G1043600 Malus domestica HOM05D000272 ORTHO05D000164 4.3e-45 186.4 428 34.1
Actinidia30307 Actinidia chinensis HOM05D000272 ORTHO05D000164 9.7e-45 185.3 410 35.4
Gohir.A07G022116 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.6e-44 184.5 411 35.0
RcHm_v2.0_Chr6g0310681 Rosa chinensis HOM05D000272 ORTHO05D000164 1.6e-44 184.5 428 33.6
Potri.018G054700 Populus trichocarpa HOM05D000272 ORTHO05D000164 6.3e-44 182.6 449 31.8
Rhsim11G0044800 Rhododendron simsii HOM05D000272 ORTHO05D000164 2.6e-42 177.2 417 34.5
Aqoxy7G01252 Aquilegia oxysepala HOM05D001205 ORTHO05D001087 7.7e-42 175.6 460 30.0
FAN27G1277 Fragaria x ananassa HOM05D000272 ORTHO05D000164 2.2e-41 174.1 418 31.8
FAN24G1584 Fragaria x ananassa HOM05D000577 ORTHO05D000164 3.8e-41 173.3 416 31.2
MD15G1061000 Malus domestica HOM05D000272 ORTHO05D000164 5.0e-41 172.9 428 32.9
FAN20G0304 Fragaria x ananassa HOM05D000272 ORTHO05D000164 6.5e-41 172.6 418 31.1
Hma1.2p1_0482F.1_g162600 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 1.9e-40 171.0 417 35.5
FvH4_2g32060 Fragaria vesca HOM05D000272 ORTHO05D000164 3.2e-40 170.2 418 31.8
Glyma.06G051600 Glycine max HOM05D000272 ORTHO05D000164 3.2e-40 170.2 452 34.3
FAN15G3216 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.6e-39 166.8 424 30.9
vmacro00150 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 3.6e-39 166.8 403 35.5
arahy.Tifrunner.gnm1.ann1.WUKV82 Arachis hypogaea HOM05D000272 ORTHO05D000164 6.1e-39 166.0 417 35.0
Phvul.009G077100 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 6.1e-39 166.0 439 33.0
arahy.Tifrunner.gnm1.ann1.4HW5AH Arachis hypogaea HOM05D000272 ORTHO05D000164 1.8e-38 164.5 401 35.9
ECA246G4237 Erigeron canadensis HOM05D000272 ORTHO05D000164 5.1e-38 162.9 325 37.5
GSVIVG01035361001 Vitis vinifera HOM05D000272 ORTHO05D000164 5.1e-38 162.9 212 49.1
MBI01_g02262_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 2.0e-37 161.0 437 31.8
PSO210G7454 Papaver somniferum HOM05D000272 ORTHO05D000164 3.3e-37 160.2 430 29.8
VMungo1309G2321 Vigna mungo HOM05D000272 ORTHO05D000164 3.3e-37 160.2 430 32.8
Phvul.001G034200 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 5.7e-37 159.5 439 33.0
Eucgr.C03024 Eucalyptus grandis HOM05D000272 ORTHO05D000164 9.7e-37 158.7 436 31.9
Sopen08g019010 Solanum pennellii HOM05D000272 ORTHO05D000164 1.3e-36 158.3 334 37.4
PGSC0003DMG400029946 Solanum tuberosum HOM05D000272 ORTHO05D000164 1.3e-36 158.3 361 36.0
Glyma.04G050800 Glycine max HOM05D000272 ORTHO05D000164 2.2e-36 157.5 441 33.3
Nitab4.5_0004160g0020 Nicotiana tabacum HOM05D000272 ORTHO05D000164 8.2e-36 155.6 239 43.9
VMungo0647G0054 Vigna mungo HOM05D000272 ORTHO05D000164 1.1e-35 155.2 438 33.1
HanXRQChr17g0538451 Helianthus annuus HOM05D000272 ORTHO05D000164 1.4e-35 154.8 330 36.7
Peaxi162Scf00136g00045 Petunia axillaris HOM05D000272 ORTHO05D000164 1.4e-35 154.8 366 35.5
Solyc08g065420.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 1.4e-35 154.8 334 37.1
Glyma.17G230000 Glycine max HOM05D000272 ORTHO05D000164 1.8e-35 154.5 422 32.5
Nitab4.5_0001584g0080 Nicotiana tabacum HOM05D000272 ORTHO05D000164 3.1e-35 153.7 239 43.5
Actinidia14708 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.9e-34 149.4 417 31.2
ClCG08G016970 Citrullus lanatus HOM05D000272 ORTHO05D000164 7.7e-34 149.1 362 34.5
CAN.G117.4 Capsicum annuum HOM05D000272 ORTHO05D000164 1.3e-33 148.3 347 36.0
Psat6g019760 Pisum sativum HOM05D000272 ORTHO05D000164 1.3e-33 148.3 433 31.6
Lalb_Chr11g0063111 Lupinus albus HOM05D000272 ORTHO05D000164 2.2e-33 147.5 372 36.0
PGR044G0114 Punica granatum HOM05D000272 ORTHO05D000164 6.5e-33 146.0 374 32.9
Lj5g0011394 Lotus japonicus HOM05D000272 ORTHO05D000164 2.5e-32 144.1 406 32.3
Lsat_1_v5_gn_3_24340 Lactuca sativa HOM05D000272 ORTHO05D000164 5.5e-32 142.9 204 47.1
MELO3C010759.2 Cucumis melo HOM05D000272 ORTHO05D000164 7.2e-32 142.5 334 34.7
MELO3C030120.2 Cucumis melo HOM05D000272 ORTHO05D000164 7.2e-32 142.5 334 34.7
HanXRQChr06g0173841 Helianthus annuus HOM05D000272 ORTHO05D000164 7.2e-32 142.5 331 35.6
Medtr1g016490 Medicago truncatula HOM05D000272 ORTHO05D000164 1.6e-31 141.4 399 32.8
TPR.G13099 Trifolium pratense HOM05D000272 ORTHO05D000164 1.6e-31 141.4 408 32.4
Oeu018649.1 Olea europaea HOM05D000272 ORTHO05D000164 2.1e-31 141.0 353 34.6
Lj1g0017549 Lotus japonicus HOM05D000272 ORTHO05D000164 3.6e-31 140.2 356 34.0
Cc08_g10440 Coffea canephora HOM05D000272 ORTHO05D000164 4.7e-31 139.8 362 34.8
SalBow1G5080 Salvia bowleyana HOM05D000272 ORTHO05D000164 4.7e-31 139.8 220 44.5
Sed0016305 Sechium edule HOM05D000272 ORTHO05D000164 4.7e-31 139.8 367 31.6
CsaV3_2G025630 Cucumis sativus L. HOM05D000272 ORTHO05D000164 1.0e-30 138.7 330 33.9
CANSAT25G2775 Cannabis sativa HOM05D000272 ORTHO05D000164 1.8e-30 137.9 222 43.2
DCAR_007725 Daucus carota HOM05D000272 ORTHO05D000164 1.8e-30 137.9 387 31.5
THA.LOC104803732 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 1.8e-30 137.9 252 37.7
MBI04_g11712_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 2.3e-30 137.5 472 29.7
AL7G18710 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 3.0e-30 137.1 216 44.4
Ca_13174_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 3.0e-30 137.1 434 29.7
Oeu047117.2 Olea europaea HOM05D000272 ORTHO05D000164 6.7e-30 136.0 262 38.2
CARHR240990 Cardamine hirsuta HOM05D000272 ORTHO05D000164 1.5e-29 134.8 219 44.7
MSTRG.11664 Avicennia marina HOM05D000272 ORTHO05D000164 2.6e-29 134.0 314 35.7
Sp7g30750 Schrenkiella parvula HOM05D000272 ORTHO05D000164 4.4e-29 133.3 227 43.2
MSTRG.14049 Avicennia marina HOM05D000272 ORTHO05D000164 1.3e-28 131.7 279 37.3
Carub.0007s0750 Capsella rubella HOM05D000272 ORTHO05D000164 1.7e-28 131.3 205 43.9
AT4G32980 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 2.2e-28 131.0 207 44.4
Thhalv10025083m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 4.8e-28 129.8 222 42.8
DCAR_004433 Daucus carota HOM05D000272 ORTHO05D000164 1.4e-27 128.3 291 34.4
Lalb_Chr23g0267751 Lupinus albus HOM05D000272 ORTHO05D000164 1.4e-27 128.3 377 32.4
BraA01t00503Z Brassica rapa HOM05D000272 ORTHO05D000164 1.8e-27 127.9 227 42.7
Aa31LG5G9720 Aethionema arabicum HOM05D000272 ORTHO05D000164 2.4e-27 127.5 199 43.2
BolC1t00549H Brassica oleracea HOM05D000272 ORTHO05D000164 2.4e-27 127.5 227 42.7
A01p05200 Brassica napus HOM05D000272 ORTHO05D000164 5.3e-27 126.3 227 42.3
BcaC09g52096 Brassica carinata HOM05D000272 ORTHO05D000164 1.6e-26 124.8 216 41.7
C01p05690 Brassica napus HOM05D000272 ORTHO05D000164 1.6e-26 124.8 216 41.7
Cpa.g.sc78.15 Carica papaya HOM05D000272 ORTHO05D000164 2.6e-26 124.0 190 42.6
Lj7A277T21 Lonicera japonica HOM05D000272 ORTHO05D000164 3.8e-25 120.2 381 29.4
A03p61730 Brassica napus HOM05D000272 ORTHO05D000164 5.0e-25 119.8 227 40.1
SalBow4G0202 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.1e-24 118.6 207 41.5
BraA03t15211Z Brassica rapa HOM05D000272 ORTHO05D000164 4.2e-24 116.7 227 39.6
BcaNung02149 Brassica carinata HOM05D000272 ORTHO05D000164 4.7e-23 113.2 97 60.8
C07p59450 Brassica napus HOM05D000272 ORTHO05D000164 4.7e-23 113.2 97 60.8
BolC7t46388H Brassica oleracea HOM05D000272 ORTHO05D000164 4.7e-23 113.2 97 60.8
A01p05240 Brassica napus HOM05D000272 ORTHO05D000164 1.8e-22 111.3 78 67.9
Actinidia01194 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.2e-22 109.8 354 29.7
Migut.A00142 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.2e-21 108.6 200 40.0
unitig_748.g7521 Utricularia gibba HOM05D000272 ORTHO05D000164 2.6e-21 107.5 228 35.5
SGA_v2.0_scaffold163G38035 Striga asiatica HOM05D000272 ORTHO05D000164 1.3e-20 105.1 195 37.4
SGA_v2.0_scaffold169G38685 Striga asiatica HOM05D000272 ORTHO05D000164 3.7e-20 103.6 171 39.2
unitig_0.g2561 Utricularia gibba HOM05D000272 ORTHO05D000164 4.1e-19 100.1 207 35.7
BolC1t00574H Brassica oleracea HOM05D000272 ORTHO05D000164 2.0e-18 97.8 208 39.9
PSO063G0664 Papaver somniferum HOM05D000272 ORTHO05D000164 2.7e-18 97.4 220 35.9
Atru.chr7.1044 Acer truncatum HOM05D000272 ORTHO05D000164 1.5e-16 91.7 250 28.0
PSO832G0977 Papaver somniferum HOM05D000272 ORTHO05D000164 2.7e-15 87.4 436 27.5
C01p05720 Brassica napus HOM05D000272 ORTHO05D037977 8.0e-15 85.9 50 80.0
HPP92_003946 Vanilla planifolia HOM05D000272 ORTHO05D000164 8.0e-15 85.9 357 26.1
CDE02G2890 Ceratophyllum demersum HOM05D000272 ORTHO05D000164 8.8e-14 82.4 246 28.9
BolC1t00552H Brassica oleracea HOM05D000272 ORTHO05D000164 1.3e-12 78.6 47 78.7
Rhsim07G0142800 Rhododendron simsii HOM05D000272 ORTHO05D000164 1.7e-12 78.2 181 34.3
RhsimUnG0250000 Rhododendron simsii HOM05D000272 ORTHO05D000164 2.2e-12 77.8 171 33.9


User provided reference genes

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