Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.1e-281 971.8 800 100.0
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.1e-184 650.2 841 78.6
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.6e-184 649.0 841 77.6
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.1e-176 623.6 841 74.6
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 9.7e-126 455.3 904 57.6
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 1.0e-111 408.7 908 56.6
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 1.6e-59 235.3 891 49.0
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 4.2e-44 184.1 427 39.1
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 4.6e-43 180.6 484 33.3
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.5e-41 175.6 523 35.0
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.7e-41 173.7 469 35.6
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 1.3e-40 172.6 543 33.9
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 1.4e-39 169.1 486 35.0
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 2.4e-39 168.3 461 37.5
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 9.0e-39 166.4 461 37.5
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 2.0e-38 165.2 482 33.6
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 2.0e-38 165.2 505 35.2
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 2.0e-38 165.2 485 32.4
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 1.3e-37 162.5 455 38.0
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 4.2e-36 157.5 870 25.7
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 1.2e-35 156.0 487 30.8
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 1.6e-35 155.6 438 32.6
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 3.5e-35 154.5 484 31.8
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 6.1e-35 153.7 442 36.2
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 6.1e-35 153.7 438 32.4
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 6.7e-34 150.2 488 30.3
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 4.3e-33 147.5 883 26.8
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 5.7e-33 147.1 455 33.2
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.1e-31 142.9 515 29.9
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 2.4e-31 141.7 477 36.5
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 5.3e-31 140.6 884 26.9
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 9.0e-31 139.8 437 30.0
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 1.5e-30 139.0 472 41.3
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 2.0e-30 138.7 448 31.5
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 2.0e-30 138.7 433 32.3
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 2.6e-30 138.3 858 25.9
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 2.6e-30 138.3 467 32.3
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 7.7e-30 136.7 535 29.2
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 1.3e-29 136.0 473 32.1
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.7e-29 135.6 519 30.8
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 1.2e-27 129.4 473 31.7
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.2e-27 129.4 484 29.8
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 1.6e-27 129.0 473 31.1
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 3.6e-27 127.9 462 30.1
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 4.6e-27 127.5 500 30.2
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 6.1e-27 127.1 443 30.7
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 1.0e-26 126.3 471 29.7
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 1.8e-26 125.6 373 36.2
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 3.9e-26 124.4 475 30.3
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 2.0e-25 122.1 484 28.7
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 2.5e-25 121.7 468 28.6
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 2.5e-25 121.7 493 29.0
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 3.3e-25 121.3 504 30.6
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 7.4e-25 120.2 502 28.9
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.7e-24 117.9 523 30.0
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.4e-23 115.9 450 36.2
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 1.8e-23 115.5 501 30.5
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 1.8e-23 115.5 517 29.4
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.2e-22 112.8 149 45.6
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 1.2e-22 112.8 504 29.4
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.0e-22 112.1 472 30.3
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.0e-22 112.1 427 30.9
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 7.7e-22 110.2 187 38.5
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.0e-21 109.8 443 28.2
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.3e-21 109.4 513 27.3
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 2.9e-21 108.2 494 30.2
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 5.0e-21 107.5 490 29.0
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 1.1e-20 106.3 488 27.3
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 3.2e-20 104.8 187 38.0
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 3.2e-20 104.8 478 26.8
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.2e-19 102.8 443 28.2
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 7.9e-19 100.1 443 27.3
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.4e-18 99.4 485 28.5
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 3.9e-18 97.8 365 30.4
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 5.1e-18 97.4 481 28.1
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 8.8e-18 96.7 485 28.2
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 1.1e-17 96.3 864 29.1
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 3.3e-17 94.7 583 25.2
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 7.4e-17 93.6 459 30.3
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 1.7e-16 92.4 510 29.6
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 1.7e-16 92.4 231 39.0
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 1.7e-16 92.4 165 40.6
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 2.2e-16 92.0 436 26.6
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 1.4e-15 89.4 490 26.1
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.4e-15 88.6 485 27.4
HPP92_009459 Vanilla planifolia HOM05D003806 ORTHO05D004346 3.1e-15 88.2 491 24.8
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.3e-15 87.4 162 42.0
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 9.1e-15 86.7 187 34.2
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 3.5e-14 84.7 424 27.8
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 4.5e-14 84.3 506 25.9
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 7.7e-14 83.6 374 27.5
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 6.5e-13 80.5 587 24.4
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 1.2e-11 76.3 507 37.1
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 1.6e-11 75.9 179 39.1
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 8.0e-11 73.6 511 26.6
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 8.0e-11 73.6 173 33.5
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 8.0e-11 73.6 525 23.6
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 1.0e-10 73.2 501 30.1
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.3e-10 72.0 165 33.3
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 2.3e-10 72.0 82 51.2
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 3.0e-10 71.6 81 50.6
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.0e-10 71.2 459 29.6
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.0e-10 71.2 459 29.6
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 4.0e-10 71.2 170 35.9
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 5.2e-10 70.9 517 25.5
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 6.7e-10 70.5 489 24.9
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 1.1e-09 69.7 373 26.3
Aa31LG5G4290 Aethionema arabicum HOM05D003806 ORTHO05D004346 3.3e-09 68.2 231 29.9
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 4.4e-09 67.8 84 52.4
BolC5t29142H Brassica oleracea HOM05D003806 ORTHO05D004346 7.5e-09 67.0 540 23.5
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 7.5e-09 67.0 469 24.1
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.3e-08 66.2 492 25.4
C05p03650 Brassica napus HOM05D003806 ORTHO05D004346 4.8e-08 64.3 279 28.0
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 6.3e-08 63.9 578 23.4
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 1.8e-07 62.4 418 28.0
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 4.1e-07 61.2 485 24.7
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 9.1e-07 60.1 389 25.4
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 9.1e-07 60.1 282 28.0
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 9.1e-07 60.1 500 32.0
BraA10t42674Z Brassica rapa HOM05D003806 ORTHO05D004346 1.2e-06 59.7 246 29.3
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 1.6e-06 59.3 195 31.3
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 2.7e-06 58.5 487 23.6
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 3.5e-06 58.2 145 35.2
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 5.9e-06 57.4 176 29.5


User provided reference genes

Program Settings