Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043600 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.1e-62 242.3 132 100.0
AUR62044057 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.1e-61 240.0 130 100.0
AUR62044188 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.4e-61 238.8 130 99.2
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.0e-43 180.3 165 67.3
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.8e-43 178.3 165 66.7
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 3.8e-27 125.2 165 49.7
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.5e-23 113.2 162 50.6
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 2.2e-19 99.4 159 45.9
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 1.9e-18 96.3 165 41.8
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.1e-10 70.5 169 34.9
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 5.5e-10 68.2 172 34.3
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 9.4e-10 67.4 180 32.2
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 2.7e-09 65.9 146 35.6
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 4.7e-09 65.1 141 34.8
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 6.1e-09 64.7 179 33.0
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 8.0e-09 64.3 167 32.9
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.0e-08 63.9 178 33.7
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 1.4e-08 63.5 160 32.5
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 2.3e-08 62.8 166 32.5
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 4.0e-08 62.0 180 30.6
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 4.0e-08 62.0 175 32.6
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 8.8e-08 60.8 178 31.5
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 8.8e-08 60.8 179 31.3
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 8.8e-08 60.8 146 32.2
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 8.8e-08 60.8 164 32.3
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 8.8e-08 60.8 175 29.7
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 8.8e-08 60.8 112 32.1
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.2e-07 60.5 170 29.4
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.2e-07 60.5 170 29.4
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.5e-07 60.1 178 29.8
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 1.5e-07 60.1 164 32.3
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 2.0e-07 59.7 162 32.7
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 2.0e-07 59.7 165 33.3
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.6e-07 59.3 171 31.6
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 3.3e-07 58.9 138 33.3
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.3e-07 58.9 170 28.8
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 3.3e-07 58.9 99 35.4
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 3.3e-07 58.9 180 31.7
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 4.4e-07 58.5 145 32.4
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 4.4e-07 58.5 177 31.6
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 5.7e-07 58.2 173 30.6
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 5.7e-07 58.2 170 32.9
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 5.7e-07 58.2 170 32.9
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 9.7e-07 57.4 175 29.7
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 9.7e-07 57.4 156 30.8
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.3e-06 57.0 173 30.6
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 1.7e-06 56.6 174 30.5
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 2.2e-06 56.2 179 30.2
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 2.2e-06 56.2 179 30.2
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 2.8e-06 55.8 164 32.3
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 2.8e-06 55.8 175 29.1
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.8e-06 55.8 173 30.1
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 3.7e-06 55.5 176 31.8
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 4.8e-06 55.1 161 32.3
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 8.2e-06 54.3 174 30.5


User provided reference genes

Program Settings