Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 4.4e-231 804.3 417 100.0
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.3e-214 749.6 417 90.2
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.1e-192 676.8 456 76.8
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 2.0e-178 629.4 361 84.5
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 5.0e-174 614.8 361 82.0
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 3.1e-168 595.5 361 79.2
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 7.7e-167 590.9 360 78.1
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 1.0e-166 590.5 360 77.8
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 1.0e-166 590.5 365 77.0
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 1.7e-166 589.7 361 78.1
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 1.7e-166 589.7 361 77.0
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 2.2e-166 589.3 360 78.1
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 1.5e-165 586.6 360 78.6
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 5.5e-165 584.7 361 76.5
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 7.2e-165 584.3 361 77.0
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 9.5e-165 583.9 360 77.8
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.2e-164 583.6 361 77.8
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 1.6e-164 583.2 371 74.9
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 2.1e-164 582.8 358 77.1
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 2.1e-164 582.8 361 76.2
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 3.6e-164 582.0 360 76.9
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 3.6e-164 582.0 361 77.3
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 3.6e-164 582.0 361 75.3
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 4.7e-164 581.6 361 77.6
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 4.7e-164 581.6 361 76.7
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 4.7e-164 581.6 361 76.7
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 6.1e-164 581.3 360 78.1
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 6.1e-164 581.3 361 76.5
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 8.0e-164 580.9 361 76.2
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 1.0e-163 580.5 365 75.6
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 1.4e-163 580.1 360 77.2
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 1.8e-163 579.7 361 76.2
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 1.8e-163 579.7 360 76.7
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 2.3e-163 579.3 360 76.9
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 3.0e-163 578.9 360 76.9
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 3.0e-163 578.9 361 77.6
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 3.0e-163 578.9 361 77.0
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 4.0e-163 578.6 361 76.2
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 5.2e-163 578.2 360 76.7
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 5.2e-163 578.2 361 75.6
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 6.8e-163 577.8 361 76.2
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 8.8e-163 577.4 361 75.3
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 8.8e-163 577.4 366 76.0
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 1.2e-162 577.0 361 75.9
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 1.2e-162 577.0 361 76.5
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 1.2e-162 577.0 362 77.6
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 1.2e-162 577.0 374 74.6
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 1.2e-162 577.0 359 76.9
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 1.5e-162 576.6 395 72.4
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 1.5e-162 576.6 359 76.6
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 1.5e-162 576.6 361 75.9
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 2.0e-162 576.2 365 75.9
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 2.0e-162 576.2 361 75.3
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 2.0e-162 576.2 361 75.6
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 2.6e-162 575.9 360 76.7
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 2.6e-162 575.9 360 75.8
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 2.6e-162 575.9 358 76.3
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 2.6e-162 575.9 357 77.0
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 2.6e-162 575.9 361 76.2
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 2.6e-162 575.9 361 75.3
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 3.4e-162 575.5 361 75.9
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 3.4e-162 575.5 359 76.3
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 4.4e-162 575.1 361 77.0
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 9.8e-162 573.9 360 76.4
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 9.8e-162 573.9 359 75.8
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 1.3e-161 573.5 361 75.6
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 2.8e-161 572.4 361 74.8
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 3.7e-161 572.0 360 76.1
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 3.7e-161 572.0 361 75.9
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 1.4e-160 570.1 360 76.1
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 2.4e-160 569.3 360 76.4
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 4.1e-160 568.5 360 75.8
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 5.4e-160 568.2 360 75.8
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 2.0e-159 566.2 377 73.2
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 2.0e-159 566.2 361 75.3
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 2.0e-159 566.2 361 75.1
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 2.7e-159 565.8 362 75.1
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 3.5e-159 565.5 366 75.4
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 4.5e-159 565.1 362 75.1
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 7.7e-159 564.3 371 74.4
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 3.8e-158 562.0 363 75.2
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 3.8e-158 562.0 363 75.2
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 3.3e-157 558.9 358 75.7
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 7.3e-157 557.8 362 75.4
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 1.2e-156 557.0 351 76.6
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 4.7e-156 555.1 362 74.6
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 6.1e-156 554.7 365 73.4
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 1.0e-155 553.9 361 74.5
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 1.8e-155 553.1 371 72.8
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 2.3e-155 552.7 360 73.6
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 2.3e-155 552.7 360 75.3
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 9.8e-154 547.4 359 78.6
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 4.9e-153 545.0 341 76.5
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 8.3e-153 544.3 359 73.0
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 8.3e-153 544.3 359 71.6
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 7.0e-152 541.2 359 73.5
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 7.0e-152 541.2 359 72.1
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 9.2e-152 540.8 359 73.5
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 1.2e-151 540.4 359 72.4
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 1.2e-151 540.4 359 71.6
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 2.0e-151 539.7 359 71.9
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 2.7e-151 539.3 359 71.6
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 5.9e-151 538.1 359 71.6
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 5.9e-151 538.1 359 71.9
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 7.8e-151 537.7 372 69.1
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 1.7e-150 536.6 361 72.9
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 1.7e-150 536.6 361 72.9
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 6.6e-150 534.6 359 71.6
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 1.5e-149 533.5 341 74.5
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 5.6e-149 531.6 374 70.6
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 7.3e-149 531.2 359 71.9
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 9.5e-149 530.8 374 70.3
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 9.5e-149 530.8 367 71.4
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 1.6e-148 530.0 352 73.0
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 2.1e-148 529.6 374 70.3
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 3.6e-148 528.9 364 71.2
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 3.6e-148 528.9 387 68.5
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 3.6e-148 528.9 359 70.2
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 4.7e-148 528.5 278 90.3
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 7.0e-144 514.6 359 73.5
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 9.2e-144 514.2 359 73.3
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 9.5e-141 504.2 359 67.7
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 4.0e-139 498.8 359 68.2
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 1.2e-127 460.7 354 61.3
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 6.6e-118 428.3 356 56.5
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 6.2e-116 421.8 354 56.5
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 4.2e-104 382.5 300 62.7
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 2.8e-92 343.2 297 59.9
MSTRG.5600 Avicennia marina HOM05D001476 ORTHO05D006149 1.3e-84 317.8 234 67.9
RcHm_v2.0_Chr3g0463911 Rosa chinensis HOM05D001476 ORTHO05D006149 5.9e-82 308.9 195 75.9
SEGI_02222 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 5.3e-75 285.8 194 69.6
vmacro17486 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.8e-70 270.8 212 64.2
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 4.8e-68 262.7 165 73.9
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 5.3e-67 259.2 231 57.6
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 1.7e-57 227.6 346 36.7
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 2.4e-51 207.2 355 38.6
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 1.2e-50 204.9 357 33.6
AagrBONN_evm.TU.Sc2ySwM_369.563 Anthoceros agrestis HOM05D001476 ORTHO05D006149 2.8e-44 183.7 155 56.8
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 3.1e-43 180.3 104 83.7
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 1.2e-39 168.3 121 63.6
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 9.2e-35 152.1 106 69.8
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 1.6e-31 141.4 150 51.3
CBR_g8542 Chara braunii HOM05D001476 ORTHO05D006149 4.0e-30 136.7 153 44.4
SHI12782 Sapria himalayana HOM05D001476 ORTHO05D006149 3.7e-20 103.6 60 75.0
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 9.2e-11 72.4 53 73.6


User provided reference genes

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