Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 4.3e-116 421.4 220 100.0
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 6.3e-59 231.5 123 96.7
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 7.7e-49 198.0 121 83.5
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 5.0e-48 195.3 121 81.8
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 1.2e-44 184.1 121 77.7
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 1.2e-44 184.1 121 76.9
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 2.0e-44 183.3 121 76.9
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 2.6e-44 183.0 121 75.2
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 2.6e-44 183.0 121 75.2
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 5.7e-44 181.8 121 75.2
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 5.7e-44 181.8 121 75.2
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 5.7e-44 181.8 122 73.8
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 9.7e-44 181.0 121 76.0
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 1.7e-43 180.3 121 73.6
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 2.8e-43 179.5 160 60.6
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 3.7e-43 179.1 121 76.0
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 4.8e-43 178.7 121 72.7
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 6.3e-43 178.3 142 64.1
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 6.3e-43 178.3 142 64.1
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 8.2e-43 177.9 137 67.9
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 8.2e-43 177.9 123 73.2
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 1.1e-42 177.6 121 74.4
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 2.4e-42 176.4 121 73.6
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 4.1e-42 175.6 121 72.7
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 9.1e-42 174.5 122 71.3
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 9.1e-42 174.5 121 72.7
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 9.1e-42 174.5 121 73.6
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 9.1e-42 174.5 121 73.6
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 1.2e-41 174.1 122 74.6
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 1.6e-41 173.7 122 73.8
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.0e-41 173.3 121 72.7
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 2.0e-41 173.3 142 62.0
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 2.7e-41 172.9 121 71.9
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 2.7e-41 172.9 141 65.2
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 2.7e-41 172.9 121 69.4
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 2.7e-41 172.9 121 71.9
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 2.7e-41 172.9 121 69.4
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 3.5e-41 172.6 121 71.9
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 3.5e-41 172.6 121 70.2
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 4.5e-41 172.2 121 71.9
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 4.5e-41 172.2 142 60.6
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 4.5e-41 172.2 121 72.7
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 5.9e-41 171.8 122 73.8
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 7.7e-41 171.4 121 72.7
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.0e-40 171.0 121 68.6
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 1.3e-40 170.6 122 71.3
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 1.7e-40 170.2 142 64.8
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.7e-40 170.2 121 72.7
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 1.7e-40 170.2 121 71.9
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 1.7e-40 170.2 121 72.7
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 2.2e-40 169.9 121 71.9
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 2.9e-40 169.5 121 71.1
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 3.8e-40 169.1 121 69.4
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 3.8e-40 169.1 122 69.7
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 5.0e-40 168.7 118 71.2
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 5.0e-40 168.7 123 74.8
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 6.5e-40 168.3 121 71.1
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 6.5e-40 168.3 122 70.5
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 1.2e-38 164.1 146 61.6
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 1.6e-38 163.7 143 61.5
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 2.7e-38 162.9 126 66.7
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 6.1e-38 161.8 142 60.6
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 1.0e-37 161.0 142 59.9
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 1.4e-37 160.6 142 59.9
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 1.8e-37 160.2 142 57.7
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 3.0e-37 159.5 117 70.9
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 3.0e-37 159.5 122 69.7
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 5.2e-37 158.7 142 58.5
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 5.2e-37 158.7 123 67.5
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.2e-36 157.5 135 60.0
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 2.0e-36 156.8 138 59.4
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 2.0e-36 156.8 135 59.3
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 3.4e-36 156.0 143 60.8
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 3.4e-36 156.0 133 62.4
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 3.4e-36 156.0 143 56.6
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 7.5e-36 154.8 123 66.7
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 1.3e-35 154.1 143 56.6
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 1.7e-35 153.7 143 56.6
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 1.7e-35 153.7 143 56.6
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 1.7e-35 153.7 143 56.6
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 1.7e-35 153.7 123 65.9
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.2e-35 153.3 123 65.9
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 2.8e-35 152.9 143 55.2
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 4.8e-35 152.1 123 65.0
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 4.8e-35 152.1 123 65.0
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 4.1e-34 149.1 142 54.9
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 9.1e-34 147.9 138 57.2
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 7.7e-33 144.8 120 62.5
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 3.8e-32 142.5 163 49.7
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 5.5e-31 138.7 142 49.3
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 1.3e-27 127.5 126 57.1
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 2.2e-27 126.7 154 50.6
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 2.8e-27 126.3 124 56.5
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 8.3e-27 124.8 122 59.0
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 2.3e-24 116.7 130 51.5
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 2.1e-22 110.2 123 52.0
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 2.8e-22 109.8 142 45.1
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 6.1e-22 108.6 135 48.1
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 4.0e-21 105.9 121 52.9
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 1.7e-19 100.5 174 39.1
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 9.2e-18 94.7 85 57.6
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 3.0e-16 89.7 58 75.9
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 5.0e-16 89.0 70 57.1
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 3.3e-15 86.3 65 60.0
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 4.0e-13 79.3 135 38.5
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 4.4e-12 75.9 76 57.9
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 2.9e-11 73.2 115 38.3
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 6.4e-11 72.0 47 74.5
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 8.3e-11 71.6 135 37.8
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 7.0e-10 68.6 39 84.6
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.2e-09 67.8 54 64.8
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 1.2e-09 67.8 133 38.3
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 2.0e-09 67.0 51 60.8
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 2.7e-09 66.6 47 61.7
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 6.0e-09 65.5 39 82.1
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.3e-08 64.3 43 69.8
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 3.9e-08 62.8 65 49.2
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 3.9e-08 62.8 61 54.1
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 1.1e-07 61.2 61 54.1
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 1.2e-06 57.8 38 73.7


User provided reference genes

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