Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040722 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.2e-82 308.9 153 100.0
AUR62044540 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.1e-65 253.4 153 86.3
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.1e-53 212.6 218 57.8
AUR62043688 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.8e-52 209.5 174 64.9
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.8e-50 202.2 227 54.2
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.7e-50 201.8 224 54.0
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 1.8e-44 183.0 227 50.2
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 1.3e-39 166.8 237 46.4
CSS0031931 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.9e-38 162.9 173 50.9
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 1.9e-38 162.9 219 45.7
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 4.7e-37 158.3 205 45.9
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 6.1e-37 157.9 220 44.1
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 1.8e-36 156.4 203 44.8
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 3.0e-36 155.6 206 44.7
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 8.9e-36 154.1 205 44.4
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 8.9e-36 154.1 217 45.2
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 1.2e-35 153.7 205 43.9
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 1.2e-35 153.7 208 45.2
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 1.5e-35 153.3 205 43.4
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 2.6e-35 152.5 205 44.9
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 3.4e-35 152.1 204 44.6
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 3.4e-35 152.1 203 43.3
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 3.4e-35 152.1 205 43.4
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 4.4e-35 151.8 205 45.9
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 4.4e-35 151.8 220 42.3
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 5.7e-35 151.4 204 45.1
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 5.7e-35 151.4 202 44.6
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 5.7e-35 151.4 220 42.7
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 1.3e-34 150.2 204 42.2
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 1.3e-34 150.2 218 43.1
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 1.7e-34 149.8 204 42.6
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 1.7e-34 149.8 217 43.8
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 2.9e-34 149.1 205 44.9
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 2.9e-34 149.1 194 44.8
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 2.9e-34 149.1 213 42.3
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 8.3e-34 147.5 215 41.9
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.1e-33 147.1 205 41.5
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 1.4e-33 146.7 220 41.4
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 2.4e-33 146.0 204 43.6
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 2.4e-33 146.0 217 41.0
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 3.2e-33 145.6 92 71.7
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 3.2e-33 145.6 209 40.7
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 4.1e-33 145.2 204 43.1
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 5.4e-33 144.8 205 42.4
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 5.4e-33 144.8 217 40.6
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 5.4e-33 144.8 213 41.8
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 7.0e-33 144.4 205 42.9
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 7.0e-33 144.4 217 41.0
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 7.0e-33 144.4 220 40.9
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 9.2e-33 144.1 205 43.9
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.2e-32 143.7 216 42.1
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 1.2e-32 143.7 218 42.7
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 1.2e-32 143.7 215 41.4
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 1.2e-32 143.7 213 41.8
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 1.6e-32 143.3 212 42.0
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 1.6e-32 143.3 219 41.6
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 2.0e-32 142.9 216 38.4
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 2.0e-32 142.9 217 41.9
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 2.0e-32 142.9 217 42.4
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 2.0e-32 142.9 207 41.5
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 2.7e-32 142.5 217 41.5
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 2.7e-32 142.5 224 41.1
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 3.5e-32 142.1 215 41.4
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 4.6e-32 141.7 206 42.7
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 4.6e-32 141.7 205 42.4
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 4.6e-32 141.7 209 42.6
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 5.9e-32 141.4 208 41.8
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 5.9e-32 141.4 205 43.4
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 7.8e-32 141.0 206 42.2
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 7.8e-32 141.0 218 41.7
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 7.8e-32 141.0 205 43.4
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 7.8e-32 141.0 92 66.3
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 7.8e-32 141.0 213 40.8
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 1.0e-31 140.6 216 39.4
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 1.0e-31 140.6 203 41.9
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 1.3e-31 140.2 206 42.7
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 1.3e-31 140.2 218 40.8
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.7e-31 139.8 205 42.4
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 1.7e-31 139.8 203 40.4
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 1.7e-31 139.8 205 42.4
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 2.3e-31 139.4 204 42.6
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 2.3e-31 139.4 205 42.9
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 3.0e-31 139.0 203 42.4
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 3.0e-31 139.0 205 42.0
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 3.0e-31 139.0 220 41.4
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 3.9e-31 138.7 215 40.5
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 3.9e-31 138.7 217 40.1
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 3.9e-31 138.7 218 39.9
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 5.0e-31 138.3 203 41.9
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 5.0e-31 138.3 213 38.5
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 6.6e-31 137.9 205 42.0
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 6.6e-31 137.9 217 41.5
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 8.6e-31 137.5 219 40.2
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 8.6e-31 137.5 218 42.2
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 8.6e-31 137.5 218 42.2
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 8.6e-31 137.5 218 42.2
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 8.6e-31 137.5 205 42.9
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 1.1e-30 137.1 207 42.5
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 1.1e-30 137.1 218 42.2
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 1.1e-30 137.1 218 42.2
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 1.5e-30 136.7 220 40.0
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 1.5e-30 136.7 205 41.5
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 2.5e-30 136.0 220 39.5
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.3e-30 135.6 220 39.5
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 3.3e-30 135.6 92 67.4
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 3.3e-30 135.6 92 67.4
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 3.3e-30 135.6 92 67.4
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 5.6e-30 134.8 204 41.7
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.6e-30 134.8 216 41.2
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 7.3e-30 134.4 92 64.1
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 7.3e-30 134.4 92 66.3
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 7.3e-30 134.4 217 40.1
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 7.3e-30 134.4 203 40.4
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 9.5e-30 134.0 203 42.4
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 9.5e-30 134.0 205 39.0
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 3.6e-29 132.1 92 65.2
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 4.7e-29 131.7 205 39.0
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 4.7e-29 131.7 205 39.0
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 8.0e-29 131.0 204 40.2
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 1.4e-28 130.2 217 38.2
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 1.8e-28 129.8 217 38.2
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 3.1e-28 129.0 205 37.6
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 3.1e-28 129.0 203 40.4
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 4.0e-28 128.6 205 40.0
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 6.8e-28 127.9 217 37.3
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 3.4e-27 125.6 198 42.9
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 6.4e-26 121.3 203 37.9
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 6.4e-26 121.3 203 37.9
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 9.2e-25 117.5 205 38.5
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.2e-24 117.1 205 39.5
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.6e-24 116.7 185 40.5
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 4.6e-24 115.2 191 38.2
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.7e-23 113.2 224 38.4
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 5.0e-23 111.7 204 37.7
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 2.5e-22 109.4 79 64.6
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 1.2e-21 107.1 171 40.4
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.6e-21 106.7 224 37.5
QL93p1517_0005 Quercus lobata HOM05D003498 ORTHO05D004191 1.6e-21 106.7 72 62.5
Dinv27202 Davidia involucrata HOM05D003498 ORTHO05D004191 3.6e-21 105.5 67 68.7
Lalb_Chr01g0016871 Lupinus albus HOM05D003498 ORTHO05D004191 3.6e-21 105.5 105 51.4
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 8.1e-21 104.4 183 41.0
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 2.3e-20 102.8 90 52.2
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 2.3e-20 102.8 203 33.0
AUR62041023 Chenopodium quinoa HOM05D003498 ORTHO05D004191 4.4e-19 98.6 164 42.1
Hma1.2p1_1219F.1_g267800 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 9.8e-19 97.4 60 70.0
Medtr0271s0030 Medicago truncatula HOM05D003498 ORTHO05D004191 2.9e-18 95.9 57 75.4
TPR.G16146 Trifolium pratense HOM05D003498 ORTHO05D004191 2.9e-18 95.9 57 75.4
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.1e-17 94.0 60 70.0
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 2.4e-17 92.8 56 73.2
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 9.2e-17 90.9 202 33.7
C05p26950 Brassica napus HOM05D003498 ORTHO05D004191 1.6e-16 90.1 120 45.8
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.5e-16 89.0 92 51.1
Zm00001eb208950 Zea mays HOM05D003498 ORTHO05D004191 4.6e-16 88.6 57 66.7
Zm00001eb248420 Zea mays HOM05D003498 ORTHO05D004191 4.6e-16 88.6 57 66.7
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 1.3e-15 87.0 203 31.0
Cre03.g190750 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 2.3e-15 86.3 139 36.0
MCO11G310 Micromonas commoda HOM05D003498 ORTHO05D004191 2.8e-13 79.3 92 39.1
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 2.3e-12 76.3 83 45.8
Zm00001eb311360 Zea mays HOM05D003498 ORTHO05D004191 2.3e-12 76.3 54 59.3
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 6.8e-12 74.7 205 29.3
Haze_25285 Corylus avellana HOM05D003498 ORTHO05D004191 1.2e-11 73.9 216 29.2
BcaB01g04580 Brassica carinata HOM05D000021 ORTHO05D000010 1.5e-11 73.6 52 69.2
Cre03.g190800 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 2.6e-11 72.8 139 29.5
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 9.9e-11 70.9 157 33.8
Atru.chr9.862 Acer truncatum HOM05D003498 ORTHO05D004191 2.2e-10 69.7 46 71.7
PRCOL_00002439 Prasinoderma coloniale HOM05D003498 ORTHO05D004191 2.2e-10 69.7 67 46.3
AUR62012625 Chenopodium quinoa HOM05D000022 ORTHO05D137949 3.2e-09 65.9 60 55.0
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 5.4e-09 65.1 161 31.1
TPR.G5710 Trifolium pratense HOM05D003498 ORTHO05D004191 7.1e-09 64.7 58 55.2
AUR62020308 Chenopodium quinoa HOM05D003498 ORTHO05D004191 7.8e-08 61.2 51 64.7
TPR.G22201 Trifolium pratense HOM05D003498 ORTHO05D004191 1.0e-07 60.8 36 72.2
AUR62007665 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.1e-07 58.5 50 64.0
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 5.1e-07 58.5 50 64.0
AUR62042316 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.1e-07 58.5 50 64.0
AUR62040396 Chenopodium quinoa HOM05D000421 ORTHO05D004191 8.6e-07 57.8 50 64.0
PSO384G2342 Papaver somniferum HOM05D003498 ORTHO05D004191 1.1e-06 57.4 124 30.6
AUR62036945 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.5e-06 57.0 50 62.0
AUR62025775 Chenopodium quinoa HOM05D003498 ORTHO05D018212 2.5e-06 56.2 50 60.0
AUR62034396 Chenopodium quinoa HOM05D003498 ORTHO05D004191 4.3e-06 55.5 50 62.0
Haze_27494 Corylus avellana HOM05D003498 ORTHO05D004191 5.6e-06 55.1 85 31.8
BcaC05g26822 Brassica carinata HOM05D003498 ORTHO05D004191 9.6e-06 54.3 105 38.1


User provided reference genes

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