Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 1.3e-147 526.6 304 100.0
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 3.0e-112 409.1 288 83.7
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 4.3e-90 335.5 290 72.1
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 3.6e-89 332.4 256 76.2
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 8.9e-88 327.8 297 68.4
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 9.8e-87 324.3 290 68.6
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 4.1e-85 318.9 290 67.6
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 9.2e-85 317.8 291 69.4
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 6.6e-83 311.6 289 68.9
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 2.5e-82 309.7 290 69.7
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 1.2e-81 307.4 313 62.6
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 2.1e-81 306.6 327 62.7
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 2.1e-81 306.6 289 66.1
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 2.8e-81 306.2 290 66.6
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.2e-79 300.8 285 67.0
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 4.4e-79 298.9 288 64.6
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 5.8e-79 298.5 322 57.8
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 7.6e-79 298.1 212 78.3
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 9.9e-79 297.7 289 64.0
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 9.9e-79 297.7 338 59.8
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 8.3e-78 294.7 312 60.9
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.1e-77 294.3 290 67.2
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 1.9e-77 293.5 289 62.6
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 2.4e-77 293.1 290 63.4
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 4.1e-77 292.4 290 63.1
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 9.2e-77 291.2 299 65.9
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 9.2e-77 291.2 283 62.2
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.6e-76 290.4 299 65.9
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 7.8e-76 288.1 281 65.1
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 1.0e-75 287.7 278 64.7
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 5.1e-75 285.4 333 55.0
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 2.5e-74 283.1 235 69.8
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 4.3e-74 282.3 291 60.8
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.6e-74 282.0 231 70.6
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 5.6e-74 282.0 231 70.6
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 7.3e-74 281.6 290 61.7
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.2e-73 280.8 212 75.5
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 2.8e-73 279.6 209 76.6
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 8.1e-73 278.1 211 77.3
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 2.4e-72 276.6 309 61.5
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 3.1e-72 276.2 289 60.6
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 4.0e-72 275.8 219 71.7
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 5.2e-72 275.4 289 61.6
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 5.2e-72 275.4 289 60.9
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 1.5e-71 273.9 309 61.5
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 2.6e-71 273.1 287 59.9
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 2.6e-71 273.1 306 57.2
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 4.4e-71 272.3 214 71.5
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 9.9e-71 271.2 272 61.8
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.3e-70 270.8 216 71.8
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 2.2e-70 270.0 238 68.1
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 2.9e-70 269.6 318 56.3
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 3.8e-70 269.2 291 57.4
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 3.8e-70 269.2 292 59.2
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 1.9e-69 266.9 308 55.2
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 2.4e-69 266.5 317 57.4
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 9.3e-69 264.6 267 62.9
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 2.1e-68 263.5 280 64.6
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 3.5e-68 262.7 225 66.2
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 6.0e-68 261.9 306 55.9
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 7.8e-68 261.5 305 56.7
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 1.0e-67 261.2 210 70.5
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 3.0e-67 259.6 239 65.3
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 3.0e-67 259.6 311 59.2
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 5.1e-67 258.8 231 65.8
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 1.1e-66 257.7 212 69.3
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 3.3e-66 256.1 285 57.2
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 7.3e-66 255.0 289 57.8
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.6e-65 252.7 308 54.5
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 1.8e-64 250.4 238 64.7
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 2.4e-64 250.0 286 57.7
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 2.4e-64 250.0 291 56.4
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 3.1e-64 249.6 275 57.1
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 4.0e-64 249.2 306 55.9
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.2e-63 247.7 238 64.3
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 1.2e-63 247.7 216 66.7
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.5e-63 247.3 238 63.9
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 7.6e-63 245.0 215 66.0
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 2.9e-62 243.0 285 57.2
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 6.4e-62 241.9 333 52.6
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 1.2e-60 237.7 263 58.6
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 5.1e-59 232.3 288 54.2
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.5e-58 230.7 234 61.1
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 7.3e-58 228.4 331 49.8
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 1.8e-56 223.8 218 61.0
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 5.3e-56 222.2 299 55.9
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 6.9e-56 221.9 191 71.7
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 9.9e-55 218.0 309 54.0
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 1.3e-54 217.6 299 55.2
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 8.4e-54 214.9 285 51.2
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 1.9e-53 213.8 267 53.9
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 1.9e-53 213.8 267 53.9
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.2e-53 213.0 212 61.3
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 4.2e-53 212.6 239 61.5
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.2e-53 212.6 212 60.8
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 9.3e-53 211.5 160 73.1
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.0e-51 208.0 161 73.3
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 1.8e-51 207.2 261 53.6
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.0e-51 206.5 211 59.7
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 3.0e-51 206.5 288 49.3
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 6.7e-51 205.3 288 51.4
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 8.7e-51 204.9 288 51.4
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 1.5e-50 204.1 288 50.7
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 1.5e-50 204.1 290 51.4
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.4e-48 196.8 183 63.4
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 5.3e-48 195.7 173 66.5
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 4.5e-47 192.6 146 71.2
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 5.8e-47 192.2 267 52.1
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 1.3e-46 191.0 150 70.0
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 1.3e-46 191.0 150 70.0
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 1.3e-46 191.0 211 55.9
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 1.1e-45 188.0 278 49.3
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 1.9e-45 187.2 288 48.6
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 3.2e-45 186.4 137 75.9
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 4.2e-45 186.0 412 38.3
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 9.3e-45 184.9 249 51.8
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 9.3e-45 184.9 146 68.5
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 1.3e-43 181.0 273 46.5
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 1.8e-43 180.6 267 48.7
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 3.9e-43 179.5 169 63.3
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 5.7e-42 175.6 208 56.7
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 1.1e-40 171.4 239 49.4
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 1.2e-39 167.9 260 46.2
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 2.2e-38 163.7 176 54.0
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 1.1e-37 161.4 236 46.2
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.4e-37 161.0 290 43.8
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.9e-37 160.6 199 52.8
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 4.2e-37 159.5 235 46.4
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 4.6e-36 156.0 190 57.4
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 5.3e-32 142.5 197 57.9
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 5.9e-31 139.0 110 69.1
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 4.6e-28 129.4 277 41.9
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 6.9e-24 115.5 146 47.3
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 3.8e-22 109.8 93 68.8
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 3.2e-21 106.7 211 40.3
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 1.8e-16 90.9 127 44.1
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 5.9e-15 85.9 82 61.0
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 5.7e-10 69.3 43 79.1


User provided reference genes

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