Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039732 Chenopodium quinoa HOM05D006258 ORTHO05D007961 6.4e-137 490.7 246 100.0
AUR62028365 Chenopodium quinoa HOM05D006258 ORTHO05D007961 4.3e-64 248.8 364 44.8
EL10Ac8g18915 Beta vulgaris HOM05D006258 ORTHO05D007961 4.3e-48 195.7 366 36.3
AUR62025364 Chenopodium quinoa HOM05D006258 ORTHO05D007961 9.2e-43 177.9 190 51.6
Ah.09g228710 Amaranthus hybridus HOM05D006258 ORTHO05D007961 3.1e-38 162.9 364 33.5
DCAR_020087 Daucus carota HOM05D006258 ORTHO05D007961 9.2e-35 151.4 364 29.9
Haze_19146 Corylus avellana HOM05D006258 ORTHO05D007961 3.6e-31 139.4 401 29.7
CiPaw.16G107200 Carya illinoinensis HOM05D006258 ORTHO05D007961 6.2e-31 138.7 401 28.4
Dinv42824 Davidia involucrata HOM05D006258 ORTHO05D007961 2.4e-30 136.7 190 42.1
Dinv43276 Davidia involucrata HOM05D006258 ORTHO05D007961 2.4e-30 136.7 190 42.1
Manes.14G112800 Manihot esculenta HOM05D006258 ORTHO05D007961 6.9e-30 135.2 190 41.1
CSS0048528 Camellia sinensis var. sinensis HOM05D006258 ORTHO05D007961 1.5e-29 134.0 419 25.8
BraA01t00683Z Brassica rapa HOM05D006258 ORTHO05D007961 3.4e-29 132.9 402 27.9
Thecc.09G153300 Theobroma cacao HOM05D006258 ORTHO05D007961 3.4e-29 132.9 189 43.4
MSTRG.19663 Avicennia marina HOM05D006258 ORTHO05D007961 7.6e-29 131.7 364 27.7
Gohir.D08G099500 Gossypium hirsutum HOM05D006258 ORTHO05D007961 9.9e-29 131.3 189 42.3
Prupe.7G266300 Prunus persica HOM05D006258 ORTHO05D007961 9.9e-29 131.3 189 39.7
C01p08100 Brassica napus HOM05D006258 ORTHO05D007961 1.3e-28 131.0 402 27.9
BcaC09g51872 Brassica carinata HOM05D006258 ORTHO05D007961 1.7e-28 130.6 402 27.6
BolC1t00798H Brassica oleracea HOM05D006258 ORTHO05D007961 1.7e-28 130.6 402 27.6
Gorai.004G107200 Gossypium raimondii HOM05D006258 ORTHO05D007961 1.7e-28 130.6 226 38.1
Sc08g0004870 Simmondsia chinensis HOM05D006258 ORTHO05D007961 1.7e-28 130.6 190 38.4
MBI15_g27201_MAGBIO Magnolia biondii HOM05D006258 ORTHO05D007961 2.9e-28 129.8 239 35.1
Sc08g0004890 Simmondsia chinensis HOM05D006258 ORTHO05D007961 2.9e-28 129.8 190 38.4
Gohir.A08G088300 Gossypium hirsutum HOM05D006258 ORTHO05D007961 3.8e-28 129.4 226 38.5
A01p07350 Brassica napus HOM05D006258 ORTHO05D007961 8.4e-28 128.3 402 27.6
Migut.J01390 Erythranthe guttata HOM05D006258 ORTHO05D007961 8.4e-28 128.3 364 26.6
FAN26G2355 Fragaria x ananassa HOM05D006258 ORTHO05D007961 1.1e-27 127.9 190 37.4
HanXRQChr03g0066041 Helianthus annuus HOM05D006258 ORTHO05D007961 1.1e-27 127.9 413 25.7
Atru.chr7.3 Acer truncatum HOM05D006258 ORTHO05D007961 1.4e-27 127.5 229 35.4
GSVIVG01014050001 Vitis vinifera HOM05D006258 ORTHO05D007961 4.2e-27 125.9 185 41.1
CsaV3_1G029170 Cucumis sativus L. HOM05D006258 ORTHO05D007961 5.4e-27 125.6 109 56.9
Actinidia20935 Actinidia chinensis HOM05D006258 ORTHO05D007961 7.1e-27 125.2 190 40.5
FvH4_1g00580 Fragaria vesca HOM05D006258 ORTHO05D007961 7.1e-27 125.2 190 36.8
FAN28G2306 Fragaria x ananassa HOM05D006258 ORTHO05D007961 7.1e-27 125.2 190 36.8
Nn8g40038 Nelumbo nucifera HOM05D006258 ORTHO05D007961 7.1e-27 125.2 227 37.4
Phvul.004G145400 Phaseolus vulgaris HOM05D006258 ORTHO05D007961 1.2e-26 124.4 233 34.3
Ciclev10007430m.g Citrus clementina HOM05D006258 ORTHO05D007961 1.6e-26 124.0 190 35.3
PGSC0003DMG400011207 Solanum tuberosum HOM05D006258 ORTHO05D007961 1.6e-26 124.0 364 27.7
MD15G1148600 Malus domestica HOM05D006258 ORTHO05D007961 2.1e-26 123.6 189 37.6
Rhsim01G0024600 Rhododendron simsii HOM05D006258 ORTHO05D007961 4.6e-26 122.5 191 37.7
Sopen07g002080 Solanum pennellii HOM05D006258 ORTHO05D007961 7.8e-26 121.7 364 27.7
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 7.8e-26 121.7 187 38.0
CDE02G4246 Ceratophyllum demersum HOM05D006258 ORTHO05D007961 1.0e-25 121.3 190 35.3
Lj9P721T44 Lonicera japonica HOM05D006258 ORTHO05D007961 1.0e-25 121.3 190 39.5
Solyc07g005950.4 Solanum lycopersicum HOM05D006258 ORTHO05D007961 1.0e-25 121.3 364 27.5
Rhsim01G0025000 Rhododendron simsii HOM05D006258 ORTHO05D007961 1.7e-25 120.6 191 38.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.3e-25 120.2 190 36.3
QL02p094105 Quercus lobata HOM05D006258 ORTHO05D007961 2.3e-25 120.2 189 37.0
Medtr2g058580 Medicago truncatula HOM05D006258 ORTHO05D007961 3.0e-25 119.8 416 26.2
Sabra06G0004300 Salix brachista HOM05D006258 ORTHO05D007961 3.0e-25 119.8 189 39.2
Nitab4.5_0006335g0030 Nicotiana tabacum HOM05D006258 ORTHO05D007961 3.9e-25 119.4 260 33.1
MELO3C010202.2 Cucumis melo HOM05D006258 ORTHO05D007961 6.6e-25 118.6 109 53.2
Potri.006G005100 Populus trichocarpa HOM05D006258 ORTHO05D007961 6.6e-25 118.6 189 38.1
PSO017G5475 Papaver somniferum HOM05D006258 ORTHO05D007961 1.1e-24 117.9 227 32.6
CANSAT11G0498 Cannabis sativa HOM05D006258 ORTHO05D007961 1.5e-24 117.5 190 36.3
TWI63G1632 Tripterygium wilfordii HOM05D006258 ORTHO05D007961 1.5e-24 117.5 189 36.0
PSO170G6770 Papaver somniferum HOM05D006258 ORTHO05D007961 1.9e-24 117.1 227 32.6
CARHR238690 Cardamine hirsuta HOM05D006258 ORTHO05D007961 3.3e-24 116.3 229 33.2
Sed0027468 Sechium edule HOM05D006258 ORTHO05D007961 3.3e-24 116.3 109 50.5
Duzib168G2382 Durio zibethinus HOM05D006258 ORTHO05D007961 4.3e-24 115.9 189 37.0
Peaxi162Scf01313g10029 Petunia axillaris HOM05D006258 ORTHO05D007961 4.3e-24 115.9 364 26.9
CAN.G1610.1 Capsicum annuum HOM05D006258 ORTHO05D007961 5.6e-24 115.5 364 26.9
Lalb_Chr06g0172791 Lupinus albus HOM05D006258 ORTHO05D007961 5.6e-24 115.5 364 26.9
TPR.G15324 Trifolium pratense HOM05D006258 ORTHO05D007961 5.6e-24 115.5 371 27.5
Nitab4.5_0003759g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 9.6e-24 114.8 364 26.9
Aqoxy7G02393 Aquilegia oxysepala HOM05D006258 ORTHO05D007961 1.6e-23 114.0 190 35.8
HPP92_018549 Vanilla planifolia HOM05D006258 ORTHO05D007961 1.6e-23 114.0 234 32.5
PGR142G1283 Punica granatum HOM05D006258 ORTHO05D007961 2.1e-23 113.6 190 34.2
ATR0739G146 Amborella trichopoda HOM05D006258 ORTHO05D007961 3.6e-23 112.8 250 31.6
BcaNung03436 Brassica carinata HOM05D006258 ORTHO05D007961 3.6e-23 112.8 190 34.2
VMungo0464G1023 Vigna mungo HOM05D006258 ORTHO05D007961 3.6e-23 112.8 189 38.1
Os09g0423300 Oryza sativa ssp. japonica HOM05D006258 ORTHO05D007961 4.8e-23 112.5 238 30.7
Aa31LG2G19560 Aethionema arabicum HOM05D006258 ORTHO05D007961 1.1e-22 111.3 226 32.3
Lsat_1_v5_gn_7_49581 Lactuca sativa HOM05D006258 ORTHO05D007961 3.1e-22 109.8 368 26.4
arahy.Tifrunner.gnm1.ann1.FEEJ53 Arachis hypogaea HOM05D006258 ORTHO05D007961 4.0e-22 109.4 191 36.6
Glyma.04G155800 Glycine max HOM05D006258 ORTHO05D007961 4.0e-22 109.4 176 37.5
SGA_v2.0_scaffold45G17009 Striga asiatica HOM05D006258 ORTHO05D007961 4.0e-22 109.4 364 25.5
arahy.Tifrunner.gnm1.ann1.MTM7TL Arachis hypogaea HOM05D006258 ORTHO05D007961 5.3e-22 109.0 191 36.6
Oeu055282.2 Olea europaea HOM05D006258 ORTHO05D007961 9.0e-22 108.2 109 50.5
Ca_02705_v3 Cicer arietinum L. HOM05D006258 ORTHO05D007961 2.6e-21 106.7 368 26.6
Nitab4.5_0006810g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 2.6e-21 106.7 213 33.8
Lj6g0013743 Lotus japonicus HOM05D006258 ORTHO05D007961 9.9e-21 104.8 190 35.3
THA.LOC104811334 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 9.9e-21 104.8 110 48.2
SalBow1G4688 Salvia bowleyana HOM05D006258 ORTHO05D007961 1.1e-19 101.3 153 41.2
AT4G30825 Arabidopsis thaliana HOM05D006258 ORTHO05D007961 7.1e-19 98.6 85 60.0
TAR625G0708 Trochodendron aralioides HOM05D006258 ORTHO05D007961 7.1e-19 98.6 123 43.9
Zm00001eb414570 Zea mays HOM05D006258 ORTHO05D007961 1.2e-18 97.8 238 28.2
COL.COLO4_05707 Corchorus olitorius HOM05D006258 ORTHO05D007961 1.6e-18 97.4 90 52.2
Psat2g031800 Pisum sativum HOM05D006258 ORTHO05D007961 1.5e-16 90.9 193 34.2
Thhalv10024344m.g Eutrema salsugineum HOM05D006258 ORTHO05D007961 3.3e-16 89.7 74 62.2
Cpa.g.sc199.25 Carica papaya HOM05D006258 ORTHO05D007961 7.4e-16 88.6 74 63.5
Carub.0007s0974 Capsella rubella HOM05D006258 ORTHO05D007961 3.6e-15 86.3 64 67.2
Actinidia12716 Actinidia chinensis HOM05D006258 ORTHO05D007961 6.2e-15 85.5 64 65.6
Sp7g28700 Schrenkiella parvula HOM05D006258 ORTHO05D007961 2.6e-13 80.1 62 64.5
SEGI_25615 Sequoiadendron giganteum HOM05D006258 ORTHO05D007961 1.3e-12 77.8 179 29.6
AL7G21300 Arabidopsis lyrata HOM05D006258 ORTHO05D007961 2.2e-12 77.0 59 64.4
Eucgr.C00243 Eucalyptus grandis HOM05D006258 ORTHO05D007961 2.9e-12 76.6 60 61.7
CDE06G1783 Ceratophyllum demersum HOM05D002479 ORTHO05D002675 8.7e-09 65.1 229 25.3
THA.LOC104814742 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 1.1e-08 64.7 48 66.7
THA.LOC109116244 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 1.1e-08 64.7 48 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1493__1494 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.9e-08 63.9 162 29.0
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 7.4e-08 62.0 204 23.0
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 1.3e-07 61.2 189 24.3
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 2.1e-07 60.5 239 23.0
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 2.8e-07 60.1 197 23.4
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 2.8e-07 60.1 197 23.4
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 3.7e-07 59.7 189 23.8
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 3.7e-07 59.7 189 24.3
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 1.4e-06 57.8 210 21.9
AagrBONN_evm.TU.Sc2ySwM_228.1578 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.8e-06 57.4 150 27.3
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 1.8e-06 57.4 210 22.9
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 1.8e-06 57.4 225 21.8
TAR625G0068 Trochodendron aralioides HOM05D006258 ORTHO05D007961 1.8e-06 57.4 48 56.2
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.4e-06 57.0 186 25.3
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 3.1e-06 56.6 189 23.3
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 4.0e-06 56.2 204 21.1
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 5.3e-06 55.8 205 24.4
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 5.3e-06 55.8 189 23.3
HPP92_002329 Vanilla planifolia HOM05D000001 ORTHO05D000003 5.3e-06 55.8 181 22.7
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 6.9e-06 55.5 204 21.1
PSO541G4059 Papaver somniferum HOM05D000001 ORTHO05D000003 6.9e-06 55.5 185 23.2
Sc20g0004090 Simmondsia chinensis HOM05D000855 ORTHO05D008530 6.9e-06 55.5 205 22.4
Lsat_1_v5_gn_5_135120 Lactuca sativa HOM05D000001 ORTHO05D009948 9.0e-06 55.1 235 24.3
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 9.0e-06 55.1 205 22.0


User provided reference genes

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