Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 0.0e+00 1585.1 825 100.0
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 0.0e+00 1380.2 801 90.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 0.0e+00 1177.2 825 76.5
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 0.0e+00 1175.2 852 74.9
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 1.5e-302 1042.7 912 65.0
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.4e-252 876.7 802 60.7
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 2.1e-248 862.8 842 57.4
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 3.9e-247 858.6 836 59.2
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 2.5e-241 839.3 843 56.7
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 1.2e-240 837.0 870 55.3
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.6e-238 829.3 844 55.2
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.7e-237 826.6 909 53.5
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.7e-237 826.6 912 52.9
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 4.8e-237 825.1 879 53.7
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 3.1e-236 822.4 899 52.8
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.3e-234 817.0 875 54.5
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.5e-233 813.5 854 54.3
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 7.2e-233 811.2 902 52.4
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.6e-232 810.1 903 52.8
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.1e-232 809.7 889 52.1
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 6.1e-232 808.1 797 57.1
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.1e-230 803.9 917 51.4
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 2.0e-230 803.1 853 54.5
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 2.0e-230 803.1 890 51.3
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 1.3e-229 800.4 928 51.5
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 2.8e-229 799.3 821 55.1
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 8.2e-229 797.7 901 52.3
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 1.1e-228 797.3 890 52.0
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 3.5e-227 792.3 887 51.7
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 3.5e-227 792.3 887 51.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 4.5e-227 792.0 817 53.5
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 4.5e-227 792.0 865 53.4
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 7.7e-227 791.2 933 49.5
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.5e-225 786.9 816 54.0
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.2e-225 785.4 816 53.9
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 9.4e-225 784.3 894 51.3
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 2.7e-224 782.7 820 54.9
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 3.6e-224 782.3 880 51.5
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.0e-223 780.8 895 50.5
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 1.8e-223 780.0 895 51.6
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 2.3e-223 779.6 945 49.4
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 3.0e-223 779.2 890 50.6
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 4.0e-223 778.9 897 51.2
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 6.8e-223 778.1 878 51.5
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 8.8e-223 777.7 928 49.2
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 3.4e-222 775.8 848 52.0
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.8e-221 772.7 903 51.3
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 3.7e-221 772.3 810 53.0
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 7.0e-220 768.1 891 50.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 9.1e-220 767.7 869 50.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 9.1e-220 767.7 883 50.3
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.7e-219 766.1 889 52.0
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 3.5e-219 765.8 811 53.4
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 5.9e-219 765.0 797 52.8
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 7.7e-219 764.6 897 50.2
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.3e-218 763.8 811 53.4
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.8e-218 762.3 979 47.2
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 1.1e-217 760.8 818 52.3
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 9.4e-217 757.7 920 49.8
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.6e-216 756.9 842 52.6
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.4e-215 753.8 842 52.5
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.3e-215 753.1 897 50.1
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 1.5e-214 750.4 811 52.3
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.3e-213 747.3 865 51.1
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.2e-213 746.5 861 51.8
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 3.7e-213 745.7 898 49.0
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 2.4e-212 743.0 890 49.3
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.6e-211 740.3 898 49.0
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.7e-211 739.6 817 51.8
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 7.7e-211 738.0 835 50.9
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 3.8e-210 735.7 793 52.1
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 5.0e-210 735.3 834 50.6
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 2.8e-208 729.6 795 51.9
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 6.1e-208 728.4 830 51.7
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.3e-207 726.5 802 51.1
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 3.0e-207 726.1 797 51.9
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 3.4e-206 722.6 820 50.9
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.0e-203 713.4 895 47.4
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 2.9e-197 693.0 936 45.3
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 6.4e-197 691.8 876 49.0
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.9e-193 680.2 911 45.7
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 2.8e-192 676.4 820 48.9
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 7.1e-188 661.8 758 49.1
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 9.2e-188 661.4 762 51.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 9.2e-180 634.8 872 44.4
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 6.0e-171 605.5 796 45.7
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.1e-164 584.7 740 48.6
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 1.1e-164 584.7 680 50.0
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 7.1e-164 582.0 818 45.0
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.5e-161 573.5 646 50.5
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.9e-157 560.1 696 48.6
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.5e-155 553.1 712 45.6
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 5.1e-154 549.3 866 41.9
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 6.3e-144 515.8 484 57.9
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.1e-143 515.0 576 49.8
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 2.6e-142 510.4 825 41.9
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 3.2e-140 503.4 453 60.0
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.7e-133 481.1 409 60.1
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 8.5e-133 478.8 543 50.6
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.6e-113 414.1 491 49.3
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 4.1e-111 406.8 377 58.4
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 3.7e-104 383.6 732 37.0
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 8.9e-90 335.9 342 56.4
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 9.5e-84 315.8 756 32.7
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 2.6e-81 307.8 222 68.0
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.3e-80 305.4 953 28.9
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 6.0e-78 296.6 520 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 4.3e-76 290.4 698 32.7
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 3.1e-66 257.7 229 64.2
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 7.8e-62 243.0 967 26.5
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 1.7e-56 225.3 293 46.8
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 7.8e-54 216.5 147 72.1
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.2e-41 176.0 249 46.6
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.1e-37 160.6 166 54.8
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 1.3e-32 146.0 217 41.9
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 9.7e-20 103.2 63 71.4
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.7e-19 102.4 147 50.3
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 1.7e-16 92.4 102 53.9
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 4.2e-15 87.8 105 52.4
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 3.6e-14 84.7 771 24.5
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 2.6e-12 78.6 155 37.4
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.7e-12 77.4 147 40.1
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 2.4e-10 72.0 86 46.5
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 2.4e-10 72.0 86 46.5
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 3.1e-10 71.6 81 46.9


User provided reference genes

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