Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038541 Chenopodium quinoa HOM05D005117 ORTHO05D005956 4.9e-90 334.3 157 100.0
EL10Ac1g01281 Beta vulgaris HOM05D005117 ORTHO05D005956 1.5e-54 216.5 110 94.5
Ah.05g170440 Amaranthus hybridus HOM05D005117 ORTHO05D005956 1.3e-53 213.4 110 92.7
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 7.2e-49 197.6 110 82.7
Hund26940 Selenicereus undatus HOM05D005117 ORTHO05D005956 3.6e-48 195.3 103 90.3
CANSAT21G1171 Cannabis sativa HOM05D005117 ORTHO05D005956 5.1e-47 191.4 110 83.6
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 6.7e-47 191.0 110 82.7
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 8.8e-47 190.7 110 82.7
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 1.1e-46 190.3 110 80.9
Nitab4.5_0001489g0010 Nicotiana tabacum HOM05D005117 ORTHO05D005956 2.0e-46 189.5 110 82.7
CSS0010464 Camellia sinensis var. sinensis HOM05D005117 ORTHO05D005956 2.6e-46 189.1 110 80.9
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 2.6e-46 189.1 110 81.8
Haze_13982 Corylus avellana HOM05D005117 ORTHO05D005956 2.6e-46 189.1 110 81.8
QL09p001419 Quercus lobata HOM05D005117 ORTHO05D005956 3.3e-46 188.7 110 82.7
MD10G1002600 Malus domestica HOM05D005117 ORTHO05D005956 5.7e-46 188.0 110 80.9
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 5.7e-46 188.0 110 81.8
CAN.G75.10 Capsicum annuum HOM05D005117 ORTHO05D005956 7.4e-46 187.6 110 81.8
Nitab4.5_0000009g0430 Nicotiana tabacum HOM05D005117 ORTHO05D005956 7.4e-46 187.6 110 81.8
RcHm_v2.0_Chr6g0250391 Rosa chinensis HOM05D005117 ORTHO05D005956 7.4e-46 187.6 110 81.8
FvH4_2g00430 Fragaria vesca HOM05D005117 ORTHO05D005956 2.8e-45 185.7 110 80.9
FAN24G1044 Fragaria x ananassa HOM05D005117 ORTHO05D005956 2.8e-45 185.7 110 80.9
Glyma.12G241600 Glycine max HOM05D005117 ORTHO05D005956 3.7e-45 185.3 110 80.9
Prupe.8G004200 Prunus persica HOM05D005117 ORTHO05D005956 3.7e-45 185.3 110 79.1
Solyc11g045120.3 Solanum lycopersicum HOM05D005117 ORTHO05D005956 3.7e-45 185.3 110 80.9
Sopen11g020570 Solanum pennellii HOM05D005117 ORTHO05D005956 3.7e-45 185.3 110 80.9
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 4.8e-45 184.9 110 80.0
RcHm_v2.0_Chr6g0249891 Rosa chinensis HOM05D005117 ORTHO05D005956 6.3e-45 184.5 110 81.8
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 80.0
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 80.0
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 79.1
Eucgr.A01322 Eucalyptus grandis HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 78.2
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 80.9
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 8.2e-45 184.1 109 78.9
Hma1.2p1_0016F.1_g010930 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 8.2e-45 184.1 109 78.9
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 8.2e-45 184.1 110 77.3
Gohir.A08G230500 Gossypium hirsutum HOM05D005117 ORTHO05D005956 1.1e-44 183.7 110 77.3
Gohir.D08G250900 Gossypium hirsutum HOM05D005117 ORTHO05D005956 1.1e-44 183.7 110 77.3
Gorai.004G267600 Gossypium raimondii HOM05D005117 ORTHO05D005956 1.1e-44 183.7 110 77.3
Lj3g0005068 Lotus japonicus HOM05D005117 ORTHO05D005956 1.1e-44 183.7 110 79.1
THA.LOC104810302 Tarenaya hassleriana HOM05D005117 ORTHO05D005956 1.4e-44 183.3 110 78.2
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 76.4
Cpa.g.sc142.12 Carica papaya HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 79.1
Ca_13614_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 79.1
Ca_30189_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 79.1
RcHm_v2.0_Chr6g0249701 Rosa chinensis HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 79.1
Sabra13G0082800 Salix brachista HOM05D005117 ORTHO05D005956 1.8e-44 183.0 110 77.3
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 2.4e-44 182.6 111 79.3
ECA247G0677 Erigeron canadensis HOM05D005117 ORTHO05D005956 2.4e-44 182.6 111 77.5
FAN20G0498 Fragaria x ananassa HOM05D005117 ORTHO05D005956 2.4e-44 182.6 110 80.0
MBI06_g32153_MAGBIO Magnolia biondii HOM05D005117 ORTHO05D005956 2.4e-44 182.6 111 77.5
Rhsim12G0002100 Rhododendron simsii HOM05D005117 ORTHO05D005956 4.1e-44 181.8 110 76.4
PGSC0003DMG401019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 5.3e-44 181.4 110 80.0
PGSC0003DMG402019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 5.3e-44 181.4 110 80.0
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 6.9e-44 181.0 110 77.3
ClCG11G008340 Citrullus lanatus HOM05D005117 ORTHO05D005956 9.1e-44 180.6 110 77.3
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 9.1e-44 180.6 110 77.3
HanXRQChr12g0369271 Helianthus annuus HOM05D005117 ORTHO05D005956 9.1e-44 180.6 111 74.8
RcHm_v2.0_Chr6g0250211 Rosa chinensis HOM05D005117 ORTHO05D005956 9.1e-44 180.6 110 79.1
Sed0010084 Sechium edule HOM05D005117 ORTHO05D005956 9.1e-44 180.6 110 78.2
Aqoxy5G01861 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 1.2e-43 180.3 110 75.5
Os02g0557600 Oryza sativa ssp. japonica HOM05D005117 ORTHO05D005956 1.2e-43 180.3 111 79.3
Psat7g227480 Pisum sativum HOM05D005117 ORTHO05D005956 1.2e-43 180.3 110 79.1
TPR.G34118 Trifolium pratense HOM05D005117 ORTHO05D005956 1.2e-43 180.3 110 78.2
Potri.013G096600 Populus trichocarpa HOM05D005117 ORTHO05D005956 1.5e-43 179.9 110 75.5
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 2.0e-43 179.5 110 77.3
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 2.0e-43 179.5 110 78.2
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 2.0e-43 179.5 111 77.5
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 2.0e-43 179.5 111 77.5
COL.COLO4_25130 Corchorus olitorius HOM05D005117 ORTHO05D005956 3.4e-43 178.7 110 75.5
Medtr4g030200 Medicago truncatula HOM05D005117 ORTHO05D005956 3.4e-43 178.7 110 77.3
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 4.5e-43 178.3 110 76.4
RcHm_v2.0_Chr6g0250171 Rosa chinensis HOM05D005117 ORTHO05D005956 4.5e-43 178.3 110 78.2
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 5.9e-43 177.9 110 76.4
PSO017G2614 Papaver somniferum HOM05D005117 ORTHO05D005956 7.7e-43 177.6 110 74.5
PSO170G3068 Papaver somniferum HOM05D005117 ORTHO05D005956 7.7e-43 177.6 110 74.5
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 7.7e-43 177.6 110 74.5
Migut.C01395 Erythranthe guttata HOM05D005117 ORTHO05D005956 1.0e-42 177.2 110 79.1
vmacro00948 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.7e-42 176.4 110 74.5
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 2.2e-42 176.0 111 78.4
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 1.1e-41 173.7 110 72.7
Atru.chr13.2570 Acer truncatum HOM05D005117 ORTHO05D005956 1.4e-41 173.3 110 73.6
unitig_37.g13073 Utricularia gibba HOM05D005117 ORTHO05D005956 1.9e-41 172.9 110 75.5
Thhalv10018306m.g Eutrema salsugineum HOM05D005117 ORTHO05D005956 5.5e-41 171.4 110 70.0
Carub.0002s1821 Capsella rubella HOM05D005117 ORTHO05D005956 7.2e-41 171.0 111 71.2
Atru.chr13.2543 Acer truncatum HOM05D005117 ORTHO05D005956 1.2e-40 170.2 110 72.7
CARHR064630 Cardamine hirsuta HOM05D005117 ORTHO05D005956 7.9e-40 167.5 110 68.2
AL2G31010 Arabidopsis lyrata HOM05D005117 ORTHO05D005956 1.0e-39 167.2 111 70.3
AT1G71350 Arabidopsis thaliana HOM05D005117 ORTHO05D005956 1.0e-39 167.2 111 70.3
vmacro00946 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.0e-39 167.2 105 74.3
Aa31LG4G9190 Aethionema arabicum HOM05D005117 ORTHO05D005956 1.4e-39 166.8 110 70.0
Sp5g26520 Schrenkiella parvula HOM05D005117 ORTHO05D005956 1.8e-39 166.4 110 69.1
BcaB03g14892 Brassica carinata HOM05D005117 ORTHO05D005956 5.2e-39 164.9 111 69.4
CDE05G1166 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 6.7e-39 164.5 111 70.3
BcaC08g46567 Brassica carinata HOM05D005117 ORTHO05D005956 1.5e-38 163.3 111 68.5
A07p37640 Brassica napus HOM05D005117 ORTHO05D005956 1.5e-38 163.3 111 68.5
C06p45410 Brassica napus HOM05D005117 ORTHO05D005956 1.5e-38 163.3 111 68.5
BraA07t31328Z Brassica rapa HOM05D005117 ORTHO05D005956 1.5e-38 163.3 111 68.5
BolC6t39599H Brassica oleracea HOM05D005117 ORTHO05D005956 3.3e-38 162.2 111 68.5
ATR1089G036 Amborella trichopoda HOM05D005117 ORTHO05D005956 4.4e-38 161.8 101 77.2
SEGI_03298 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 5.7e-38 161.4 104 73.1
AagrBONN_evm.TU.Sc2ySwM_340.48 Anthoceros agrestis HOM05D005117 ORTHO05D005956 9.7e-38 160.6 111 67.6
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 1.3e-37 160.2 110 67.3
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 2.8e-37 159.1 112 67.0
Aqoxy5G01859 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 7.0e-36 154.5 117 66.7
Peaxi162Scf00078g01021 Petunia axillaris HOM05D005117 ORTHO05D005956 4.5e-35 151.8 103 70.9
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 2.9e-34 149.1 94 77.7
RcHm_v2.0_Chr6g0250321 Rosa chinensis HOM05D005117 ORTHO05D005956 1.1e-33 147.1 99 73.7
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 7.2e-25 117.9 71 77.5
RcHm_v2.0_Chr6g0249981 Rosa chinensis HOM05D005117 ORTHO05D005956 2.7e-24 115.9 69 81.2
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 1.8e-23 113.2 94 60.6
vmacro00947 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 5.7e-22 108.2 78 67.9
Cre06.g303650 Chlamydomonas reinhardtii HOM05D005117 ORTHO05D005956 2.2e-21 106.3 105 49.5
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 4.8e-21 105.1 67 73.1
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 5.0e-18 95.1 72 61.1
Rhsim03G0007800 Rhododendron simsii HOM05D000003 ORTHO05D005956 1.5e-17 93.6 62 69.4
MCO13G430 Micromonas commoda HOM05D005117 ORTHO05D005956 2.3e-15 86.3 106 37.7
RcHm_v2.0_Chr6g0249241 Rosa chinensis HOM05D005117 ORTHO05D005956 9.2e-12 74.3 39 84.6
Cc10_g13530 Coffea canephora HOM05D005117 ORTHO05D005956 8.6e-10 67.8 40 77.5
Rhsim09G0011400 Rhododendron simsii HOM05D005117 ORTHO05D005956 8.6e-10 67.8 51 62.7
SHI49642 Sapria himalayana HOM05D005117 ORTHO05D005956 1.1e-09 67.4 40 70.0
Zm00001eb084470 Zea mays HOM05D005117 ORTHO05D005956 1.0e-07 60.8 38 71.1


User provided reference genes

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