Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.5e-172 608.6 296 100.0
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.1e-101 374.0 212 90.1
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.8e-85 320.1 356 54.5
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 4.0e-85 318.9 273 64.5
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 3.0e-80 302.8 188 81.4
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 6.7e-80 301.6 264 60.2
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 1.5e-79 300.4 290 57.2
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 9.0e-77 291.2 252 61.1
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.7e-75 287.0 264 59.1
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.4e-74 283.9 265 58.5
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.9e-74 283.5 291 54.6
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 4.2e-74 282.3 290 54.8
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 4.2e-74 282.3 292 53.8
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 4.2e-74 282.3 292 53.8
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 5.5e-74 282.0 307 52.1
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 5.5e-74 282.0 305 52.1
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 7.1e-74 281.6 245 60.4
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 7.1e-74 281.6 292 54.5
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 2.1e-73 280.0 289 55.0
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.7e-73 279.6 307 51.1
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 4.6e-73 278.9 300 53.7
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 6.0e-73 278.5 272 56.2
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.3e-72 277.3 272 55.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.3e-72 276.6 308 51.3
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.3e-72 276.6 308 51.3
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 2.3e-72 276.6 308 51.3
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 5.1e-72 275.4 312 51.6
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 5.1e-72 275.4 272 56.6
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.1e-71 274.2 274 56.6
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.5e-71 273.9 265 55.8
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.9e-71 273.5 267 55.1
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 2.5e-71 273.1 268 56.0
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.3e-71 272.7 269 56.1
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 4.3e-71 272.3 275 54.5
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 5.6e-71 271.9 286 54.2
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 7.4e-71 271.6 289 53.3
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 9.6e-71 271.2 273 56.0
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.3e-70 270.8 268 56.0
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.3e-70 270.8 289 54.0
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.6e-70 270.4 267 55.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.1e-70 270.0 290 52.8
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 2.1e-70 270.0 268 56.3
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 2.1e-70 270.0 264 56.1
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 2.8e-70 269.6 267 55.4
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 3.7e-70 269.2 266 55.6
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.7e-70 269.2 268 55.2
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.7e-70 269.2 284 53.5
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 4.8e-70 268.9 283 52.7
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 4.8e-70 268.9 267 55.1
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 6.2e-70 268.5 267 54.7
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.1e-69 267.7 315 50.5
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.8e-69 266.9 272 54.4
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.8e-69 266.9 260 56.2
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.3e-69 265.4 260 56.5
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 6.9e-69 265.0 266 54.9
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 9.0e-69 264.6 225 62.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 7.6e-68 261.5 267 54.3
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.0e-67 261.2 260 55.4
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.7e-67 260.4 308 49.7
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 3.8e-67 259.2 275 51.6
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.1e-66 257.7 279 53.0
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.1e-66 257.7 268 53.4
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.1e-66 257.7 268 53.4
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.1e-66 257.7 310 50.6
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.4e-66 257.3 265 55.5
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.9e-66 256.9 268 53.7
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.8e-64 250.4 265 54.3
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.1e-63 247.7 323 46.4
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.5e-63 246.5 211 62.1
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.3e-63 245.7 282 51.4
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 4.3e-63 245.7 282 51.4
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 9.6e-63 244.6 357 43.7
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 9.6e-63 244.6 357 43.7
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.8e-62 243.0 306 47.1
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.1e-61 241.1 282 50.7
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.1e-61 239.6 277 49.1
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 5.3e-61 238.8 213 59.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 9.0e-61 238.0 331 45.3
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.0e-59 234.6 263 49.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 3.8e-59 232.6 350 42.6
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.4e-58 230.7 308 45.5
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.5e-58 229.9 236 55.5
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.9e-55 220.3 244 50.4
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.3e-55 219.2 213 57.3
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 2.2e-54 216.9 262 48.1
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 8.2e-54 214.9 261 48.7
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.2e-52 211.1 244 50.8
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 4.5e-52 209.1 288 44.1
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 7.7e-52 208.4 235 52.3
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.1e-50 204.5 196 56.6
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.9e-50 203.8 310 45.2
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.1e-49 200.3 277 43.7
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.1e-49 198.7 194 56.2
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.4e-45 187.6 295 40.0
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 3.1e-45 186.4 282 39.4
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 9.1e-45 184.9 263 43.0
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.0e-44 183.7 269 40.9
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.8e-43 179.5 295 38.6
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 5.0e-43 179.1 295 38.6
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.6e-41 174.1 117 73.5
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.6e-41 174.1 117 73.5
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 3.9e-40 169.5 108 76.9
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 4.1e-37 159.5 212 45.8
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.1e-37 159.5 176 51.1
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 3.5e-36 156.4 213 43.7
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 9.7e-31 138.3 197 44.7
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 2.2e-30 137.1 289 34.3
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 2.2e-30 137.1 105 67.6
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.2e-12 78.2 69 58.0
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.0e-11 75.1 111 45.9
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 2.8e-09 67.0 36 80.6
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 3.6e-09 66.6 158 29.7
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.0e-08 65.1 96 37.5
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.5e-07 61.2 48 66.7
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 3.4e-07 60.1 57 56.1
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.7e-07 59.3 49 61.2
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 6.4e-06 55.8 49 53.1


User provided reference genes

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