Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.1e-68 262.3 139 100.0
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.9e-53 212.6 123 91.9
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 2.4e-48 195.7 107 93.5
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.0e-46 190.3 114 86.0
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 5.0e-46 188.0 117 82.1
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 6.6e-46 187.6 111 83.8
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 6.6e-46 187.6 111 83.8
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 6.6e-46 187.6 111 83.8
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 8.6e-46 187.2 114 83.3
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 8.6e-46 187.2 117 85.5
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.5e-45 186.4 114 83.3
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.5e-45 186.4 114 83.3
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 1.5e-45 186.4 115 84.3
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.9e-45 186.0 114 83.3
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 2.5e-45 185.7 109 82.6
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 4.3e-45 184.9 114 86.0
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.6e-45 184.5 131 74.8
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 7.3e-45 184.1 114 79.8
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 9.5e-45 183.7 109 81.7
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 9.5e-45 183.7 109 81.7
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 9.5e-45 183.7 109 81.7
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 1.2e-44 183.3 109 83.5
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.2e-44 183.3 109 84.4
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 1.6e-44 183.0 104 88.5
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 1.6e-44 183.0 107 86.0
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.6e-44 183.0 109 83.5
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.6e-44 183.0 110 83.6
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.6e-44 183.0 109 81.7
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 2.1e-44 182.6 105 87.6
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 2.8e-44 182.2 109 82.6
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.8e-44 182.2 112 81.2
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 3.6e-44 181.8 102 89.2
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 3.6e-44 181.8 114 83.3
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 3.6e-44 181.8 102 87.3
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.7e-44 181.4 114 81.6
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 4.7e-44 181.4 110 80.9
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.7e-44 181.4 114 79.8
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.7e-44 181.4 114 79.8
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.7e-44 181.4 114 79.8
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.7e-44 181.4 114 79.8
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 6.2e-44 181.0 104 86.5
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 8.0e-44 180.6 114 81.6
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 8.0e-44 180.6 109 82.6
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 8.0e-44 180.6 114 83.3
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 8.0e-44 180.6 114 81.6
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 8.0e-44 180.6 109 82.6
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 8.0e-44 180.6 114 81.6
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 1.4e-43 179.9 114 81.6
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 2.3e-43 179.1 109 81.7
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.3e-43 179.1 109 81.7
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.3e-43 179.1 114 80.7
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 3.1e-43 178.7 114 80.7
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 5.2e-43 177.9 127 74.8
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.2e-42 176.8 115 81.7
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 3.4e-42 175.3 113 82.3
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 3.4e-42 175.3 113 82.3
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 7.5e-42 174.1 110 79.1
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 7.5e-42 174.1 114 79.8
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 7.5e-42 174.1 114 78.9
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 9.8e-42 173.7 122 76.2
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 9.8e-42 173.7 105 78.1
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 9.8e-42 173.7 118 79.7
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 9.8e-42 173.7 100 88.0
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 1.3e-41 173.3 114 77.2
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 1.3e-41 173.3 114 78.1
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.7e-41 172.9 114 79.8
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.7e-41 172.9 110 81.8
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 2.2e-41 172.6 109 79.8
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 2.2e-41 172.6 109 79.8
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 2.2e-41 172.6 114 79.8
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 2.9e-41 172.2 112 76.8
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 3.7e-41 171.8 115 77.4
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 8.3e-41 170.6 117 76.9
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 1.4e-40 169.9 114 74.6
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 2.4e-40 169.1 114 78.9
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 2.4e-40 169.1 114 78.9
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.4e-40 169.1 114 78.9
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.4e-40 169.1 114 78.9
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 2.4e-40 169.1 110 78.2
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 3.2e-40 168.7 114 78.1
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 3.2e-40 168.7 112 75.9
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 3.2e-40 168.7 114 78.1
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 5.4e-40 167.9 114 78.1
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 5.4e-40 167.9 114 78.1
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 5.4e-40 167.9 114 78.1
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 5.4e-40 167.9 142 68.3
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 7.0e-40 167.5 100 83.0
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 7.0e-40 167.5 114 73.7
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 9.2e-40 167.2 112 72.3
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 1.2e-39 166.8 114 77.2
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.6e-39 166.4 114 77.2
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 1.6e-39 166.4 114 77.2
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 2.0e-39 166.0 106 80.2
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 2.7e-39 165.6 114 76.3
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 2.7e-39 165.6 114 76.3
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 2.7e-39 165.6 114 75.4
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.5e-39 165.2 117 74.4
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 3.5e-39 165.2 140 66.4
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 4.6e-39 164.9 105 79.0
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 4.6e-39 164.9 114 71.9
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 6.0e-39 164.5 114 76.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.8e-39 164.1 104 76.9
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 7.8e-39 164.1 104 76.9
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.0e-38 163.7 96 85.4
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.0e-38 163.7 96 85.4
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 1.3e-38 163.3 119 72.3
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 2.3e-38 162.5 114 74.6
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.9e-38 161.8 112 73.2
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 8.6e-38 160.6 104 76.0
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 2.5e-37 159.1 113 75.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 2.5e-37 159.1 104 77.9
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 7.3e-37 157.5 97 83.5
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.8e-35 152.9 101 71.3
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 5.8e-34 147.9 194 46.4
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 7.5e-34 147.5 97 72.2
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 9.8e-34 147.1 110 68.2
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.9e-32 142.9 117 69.2
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 4.1e-32 141.7 120 69.2
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 2.1e-31 139.4 114 67.5
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 2.5e-29 132.5 79 84.8
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 7.3e-29 131.0 97 66.0
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 6.2e-28 127.9 100 67.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.6e-26 122.5 70 82.9
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 6.4e-25 117.9 102 63.7
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.9e-24 116.3 114 59.6
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 9.2e-24 114.0 98 61.2
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 2.4e-19 99.4 52 86.5
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 5.2e-19 98.2 102 57.8
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.0e-18 96.3 57 77.2
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 4.4e-18 95.1 61 82.0
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 9.9e-18 94.0 78 59.0
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 1.3e-17 93.6 57 80.7
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.7e-17 93.2 58 81.0
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 2.9e-17 92.4 57 80.7
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 6.4e-17 91.3 96 50.0
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.4e-16 90.1 56 82.1
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.4e-16 89.4 61 78.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 2.4e-16 89.4 80 66.2
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 4.2e-16 88.6 76 59.2
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 1.2e-15 87.0 57 78.9
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 2.7e-15 85.9 71 63.4
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.7e-14 83.2 45 84.4
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 2.3e-14 82.8 57 78.9
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 8.7e-14 80.9 105 51.4
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 2.5e-13 79.3 105 41.0
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 1.4e-11 73.6 117 41.0
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 9.9e-10 67.4 80 50.0
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 4.2e-08 62.0 37 78.4
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 7.1e-08 61.2 37 81.1
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.2e-07 60.5 48 68.8
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 2.1e-07 59.7 41 70.7


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