Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 3.3e-40 167.9 84 100.0
AUR62037167 Chenopodium quinoa HOM05D004427 ORTHO05D005381 3.3e-40 167.9 84 100.0
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.7e-33 145.6 84 85.7
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 5.0e-25 117.5 85 71.8
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.2e-23 112.8 80 68.8
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 3.2e-19 98.2 76 61.8
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 5.4e-19 97.4 82 57.3
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 7.1e-19 97.1 82 58.5
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 1.2e-18 96.3 76 61.8
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 1.2e-18 96.3 76 61.8
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 1.6e-18 95.9 77 59.7
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 6.0e-18 94.0 80 51.2
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 1.0e-17 93.2 78 51.3
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.0e-17 93.2 83 54.2
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.0e-17 93.2 80 55.0
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 1.7e-17 92.4 79 54.4
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 2.3e-17 92.0 75 58.7
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 2.3e-17 92.0 75 52.0
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 2.3e-17 92.0 76 53.9
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 3.0e-17 91.7 75 61.3
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 3.9e-17 91.3 75 60.0
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 5.1e-17 90.9 79 53.2
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 5.1e-17 90.9 75 60.0
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 1.1e-16 89.7 75 60.0
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 1.1e-16 89.7 76 52.6
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 1.5e-16 89.4 75 57.3
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 1.5e-16 89.4 75 56.0
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 1.9e-16 89.0 75 57.3
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 2.5e-16 88.6 79 51.9
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 2.5e-16 88.6 75 57.3
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 2.5e-16 88.6 75 57.3
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 3.3e-16 88.2 75 52.0
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 3.3e-16 88.2 75 57.3
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 3.3e-16 88.2 76 50.0
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 3.3e-16 88.2 77 55.8
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 4.3e-16 87.8 80 50.0
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 7.3e-16 87.0 77 50.6
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 9.5e-16 86.7 80 50.0
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 1.6e-15 85.9 79 50.6
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 1.6e-15 85.9 76 48.7
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 2.1e-15 85.5 73 52.1
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 2.1e-15 85.5 75 54.7
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 2.1e-15 85.5 78 53.8
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 2.8e-15 85.1 77 50.6
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.8e-15 85.1 78 55.1
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 2.8e-15 85.1 76 52.6
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 2.8e-15 85.1 78 51.3
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 2.8e-15 85.1 79 48.1
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 3.6e-15 84.7 75 53.3
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 4.7e-15 84.3 78 53.8
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 4.7e-15 84.3 78 44.9
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 6.2e-15 84.0 77 49.4
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 6.2e-15 84.0 77 48.1
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 6.2e-15 84.0 76 50.0
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 8.1e-15 83.6 77 49.4
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 8.1e-15 83.6 75 54.7
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 1.1e-14 83.2 71 56.3
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 1.4e-14 82.8 77 48.1
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 1.4e-14 82.8 77 48.1
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 1.4e-14 82.8 77 48.1
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 1.8e-14 82.4 76 50.0
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.8e-14 82.4 77 50.6
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 1.8e-14 82.4 76 52.6
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.4e-14 82.0 78 53.8
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 2.4e-14 82.0 74 54.1
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 2.4e-14 82.0 76 51.3
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 3.1e-14 81.6 77 48.1
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.1e-14 81.6 79 48.1
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 4.0e-14 81.3 78 48.7
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 4.0e-14 81.3 78 50.0
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 5.2e-14 80.9 77 48.1
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 5.2e-14 80.9 77 48.1
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.2e-14 80.9 83 48.2
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 5.2e-14 80.9 69 53.6
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 5.2e-14 80.9 77 49.4
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 6.8e-14 80.5 77 45.5
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 6.8e-14 80.5 77 51.9
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 6.8e-14 80.5 77 45.5
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 8.9e-14 80.1 75 50.7
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 1.5e-13 79.3 77 45.5
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 1.5e-13 79.3 79 49.4
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 1.5e-13 79.3 75 50.7
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 2.0e-13 79.0 77 44.2
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 2.0e-13 79.0 77 50.6
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 3.4e-13 78.2 72 48.6
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 3.4e-13 78.2 75 48.0
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.4e-13 77.8 83 48.2
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 7.6e-13 77.0 76 46.1
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 9.9e-13 76.6 79 44.3
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 9.9e-13 76.6 75 45.3
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 1.3e-12 76.3 77 42.9
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 1.7e-12 75.9 74 48.6
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 2.2e-12 75.5 74 51.4
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 2.2e-12 75.5 69 55.1
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 6.4e-12 73.9 74 50.0
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.4e-11 72.8 65 55.4
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 4.1e-11 71.2 75 49.3
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.2e-10 69.7 74 47.3
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 3.5e-10 68.2 64 50.0
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.6e-10 67.8 67 50.7
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 7.8e-10 67.0 76 43.4
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 1.3e-09 66.2 63 47.6
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 1.7e-09 65.9 76 46.1
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.3e-09 65.5 64 48.4
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.3e-09 65.5 64 46.9
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 3.9e-09 64.7 66 43.9
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 3.9e-09 64.7 66 43.9
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 3.9e-09 64.7 76 42.1
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 5.1e-09 64.3 66 51.5
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 6.6e-09 63.9 64 46.9
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 1.5e-08 62.8 72 43.1
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 1.9e-08 62.4 68 45.6
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 2.5e-08 62.0 62 41.9
Rhsim01G0258900 Rhododendron simsii HOM05D004427 ORTHO05D005381 2.5e-08 62.0 61 47.5
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 4.3e-08 61.2 65 35.4
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 2.1e-07 58.9 53 45.3
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 2.1e-07 58.9 65 47.7
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 6.2e-07 57.4 53 50.9
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 6.2e-07 57.4 65 41.5
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 8.1e-07 57.0 63 41.3
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.4e-06 56.2 65 46.2
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 1.4e-06 56.2 50 52.0
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 1.4e-06 56.2 66 42.4
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.0e-06 54.7 81 38.3
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 5.2e-06 54.3 65 44.6
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 5.2e-06 54.3 65 44.6
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.9e-06 53.9 40 57.5
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.9e-06 53.9 81 38.3


User provided reference genes

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