Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 2.7e-164 582.0 316 100.0
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 6.8e-99 364.8 271 75.6
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 8.9e-91 337.8 304 67.1
Ah.12g062100 Amaranthus hybridus HOM05D001562 ORTHO05D001437 4.3e-61 239.2 304 53.3
Hund15148 Selenicereus undatus HOM05D001562 ORTHO05D001437 1.9e-48 197.2 315 49.2
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 6.3e-36 155.6 297 41.1
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 2.6e-34 150.2 280 39.6
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 6.5e-33 145.6 203 48.8
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 3.6e-31 139.8 204 49.5
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 6.1e-31 139.0 204 50.5
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.3e-30 137.1 203 45.8
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 6.7e-30 135.6 189 50.8
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 1.3e-28 131.3 365 34.5
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 3.7e-28 129.8 172 51.7
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 6.3e-28 129.0 213 42.3
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 6.3e-28 129.0 185 44.9
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 1.4e-27 127.9 189 48.1
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 1.6e-26 124.4 202 45.5
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 2.6e-26 123.6 200 46.5
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 4.5e-26 122.9 202 44.1
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.7e-25 120.9 348 34.5
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 2.9e-25 120.2 190 44.2
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 3.8e-25 119.8 185 48.1
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 6.5e-25 119.0 226 38.1
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.5e-24 117.9 190 43.2
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 1.9e-24 117.5 291 36.1
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 2.5e-24 117.1 189 47.1
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 3.2e-24 116.7 274 35.4
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 9.4e-24 115.2 192 46.4
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 9.4e-24 115.2 206 42.7
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.2e-23 114.8 196 46.4
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 1.6e-23 114.4 190 42.6
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 2.7e-23 113.6 196 42.9
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 3.6e-23 113.2 256 37.1
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 8.0e-23 112.1 203 41.4
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 2.3e-22 110.5 211 38.4
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 5.2e-22 109.4 194 43.8
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 1.5e-21 107.8 191 45.0
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 2.6e-21 107.1 209 43.5
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 2.6e-21 107.1 202 41.6
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 2.6e-21 107.1 201 38.8
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 3.4e-21 106.7 192 39.6
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 5.7e-21 105.9 315 34.3
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 7.5e-21 105.5 198 39.4
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 9.8e-21 105.1 241 39.8
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 1.7e-20 104.4 185 42.7
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 1.7e-20 104.4 185 42.7
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 1.7e-20 104.4 185 41.1
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 2.2e-20 104.0 203 39.9
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 4.8e-20 102.8 200 41.0
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 6.3e-20 102.4 207 39.1
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 6.3e-20 102.4 207 39.1
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 1.4e-19 101.3 181 40.3
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.4e-19 100.5 183 41.5
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 2.0e-18 97.4 206 37.9
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 2.0e-18 97.4 203 39.4
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 4.5e-18 96.3 171 43.3
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 4.5e-18 96.3 171 43.3
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 4.5e-18 96.3 154 43.5
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 1.7e-17 94.4 205 40.5
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 6.5e-17 92.4 223 35.4
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 1.1e-16 91.7 278 34.9
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 1.1e-16 91.7 274 33.6
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 1.5e-16 91.3 190 36.3
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 1.9e-16 90.9 326 30.1
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 3.2e-16 90.1 166 42.2
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 4.2e-16 89.7 172 40.1
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 9.4e-16 88.6 206 38.3
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 2.1e-15 87.4 180 37.8
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 4.7e-15 86.3 159 42.1
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.4e-14 84.7 172 44.2
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 1.8e-14 84.3 203 34.5
SalBow1G3436 Salvia bowleyana HOM05D001562 ORTHO05D001437 2.3e-14 84.0 177 45.2
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 1.2e-13 81.6 268 34.0
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 2.0e-13 80.9 183 42.6
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 2.6e-13 80.5 179 39.1
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 4.9e-12 76.3 167 37.1
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 8.3e-12 75.5 319 29.2
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 7.0e-11 72.4 195 31.3
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 9.1e-11 72.0 194 35.6
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 4.5e-10 69.7 163 36.2
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 4.5e-10 69.7 173 37.6
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 2.3e-09 67.4 167 38.9
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 1.9e-08 64.3 180 40.6


User provided reference genes

Program Settings