Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 6.0e-211 737.3 376 100.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.8e-178 629.4 371 89.5
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.2e-145 520.4 400 68.8
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.7e-144 516.5 408 68.6
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 8.1e-131 471.1 400 62.8
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 1.1e-100 370.9 427 51.1
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.1e-98 364.4 427 49.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.7e-96 357.1 414 50.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.7e-96 357.1 442 47.5
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.9e-95 353.6 403 51.6
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 2.4e-95 353.2 435 49.0
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 2.4e-95 353.2 410 49.8
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.1e-94 350.1 416 50.7
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.5e-94 349.4 407 50.6
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 4.6e-94 349.0 414 49.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.3e-93 346.7 413 50.1
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.3e-93 346.7 414 48.6
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 8.7e-93 344.7 403 50.6
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.5e-92 344.0 408 48.3
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 1.5e-92 344.0 414 49.0
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.5e-92 344.0 410 50.0
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 7.4e-92 341.7 406 49.5
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 9.6e-92 341.3 414 48.1
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 8.1e-91 338.2 401 51.1
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 2.4e-90 336.7 409 49.4
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 4.0e-90 335.9 478 43.5
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 5.8e-89 332.0 404 48.3
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.0e-88 331.3 416 47.4
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 2.2e-88 330.1 415 47.0
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 3.8e-88 329.3 419 47.0
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 4.9e-88 328.9 394 47.5
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 4.9e-88 328.9 408 46.8
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 8.4e-88 328.2 397 46.6
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.1e-87 327.8 403 50.1
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 1.2e-86 324.3 418 46.4
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.2e-86 324.3 380 48.4
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 2.7e-86 323.2 408 46.3
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.7e-86 323.2 424 46.0
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.7e-86 323.2 404 46.5
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 2.7e-86 323.2 416 47.6
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 1.0e-85 321.2 429 46.6
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.0e-85 321.2 400 47.0
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 3.0e-85 319.7 434 45.2
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 3.9e-85 319.3 380 51.3
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 3.9e-85 319.3 379 50.7
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 8.7e-85 318.2 410 48.0
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 8.7e-85 318.2 402 46.8
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.3e-84 316.2 383 49.3
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 4.3e-84 315.8 422 46.0
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 7.4e-84 315.1 369 51.2
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.4e-84 315.1 379 49.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 9.6e-84 314.7 369 51.2
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.3e-83 314.3 378 50.0
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.3e-83 314.3 423 45.4
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.3e-83 314.3 396 46.7
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 3.7e-83 312.8 379 50.1
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 3.7e-83 312.8 386 50.3
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 3.7e-83 312.8 282 59.6
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 6.3e-83 312.0 423 45.2
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.1e-82 311.2 379 47.5
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.1e-82 311.2 382 49.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 3.1e-82 309.7 395 45.8
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 4.1e-82 309.3 438 43.8
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 9.0e-82 308.1 372 51.3
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 9.0e-82 308.1 352 50.9
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 9.0e-82 308.1 379 49.3
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 1.2e-81 307.8 380 49.5
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.5e-81 307.4 376 50.5
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.5e-81 307.4 376 50.5
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.5e-81 307.4 380 48.9
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.5e-81 307.4 404 46.3
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.5e-81 307.4 394 46.2
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 4.5e-81 305.8 364 48.9
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.7e-80 303.9 410 46.1
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.7e-80 303.9 376 48.1
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.8e-80 302.8 380 48.7
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.0e-80 302.4 424 43.2
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.4e-79 300.8 367 48.8
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.5e-79 300.1 382 46.3
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 4.2e-79 299.3 391 44.5
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 4.6e-78 295.8 382 45.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 5.1e-77 292.4 394 45.7
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 2.5e-76 290.0 400 44.2
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 4.8e-75 285.8 434 43.5
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.4e-74 284.3 381 43.8
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 2.4e-74 283.5 347 48.1
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-73 281.2 399 46.9
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.0e-72 278.1 408 43.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.2e-72 276.9 297 55.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 6.5e-72 275.4 369 46.9
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.4e-71 274.2 418 39.7
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.3e-67 261.2 417 40.0
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 4.5e-65 252.7 271 55.7
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 1.7e-64 250.8 392 40.6
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.0e-60 237.3 430 38.4
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.4e-58 230.3 236 56.4
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.3e-48 198.0 225 50.7
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 2.7e-46 190.3 201 54.2
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 6.1e-46 189.1 116 78.4
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.0e-45 188.3 421 32.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 1.8e-45 187.6 116 77.6
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 3.0e-45 186.8 422 31.5
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.7e-43 181.0 116 75.9
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.7e-43 179.9 116 75.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 2.0e-41 174.1 431 30.9
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.5e-39 167.2 116 69.0
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 5.2e-37 159.5 94 80.9
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-35 154.1 220 45.9
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.6e-33 147.9 223 39.5
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 8.9e-29 132.1 189 38.6
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.2e-28 131.7 116 57.8
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 2.0e-28 131.0 99 68.7
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.7e-27 127.9 108 59.3
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 3.9e-24 116.7 124 48.4
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 2.5e-23 114.0 221 34.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 9.5e-23 112.1 121 52.9
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 9.5e-23 112.1 147 46.3
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 4.0e-21 106.7 122 44.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.0e-20 104.4 203 39.9
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 7.8e-17 92.4 139 39.6
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.5e-15 88.2 168 33.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.2e-14 85.1 65 64.6
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 2.1e-14 84.3 155 33.5
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 7.5e-12 75.9 66 59.1
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 7.5e-12 75.9 122 37.7
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 3.5e-09 67.0 106 36.8
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 1.0e-08 65.5 89 41.6
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.6e-08 62.4 108 37.0


User provided reference genes

Program Settings