Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.6e-291 1004.2 510 100.0
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.3e-285 985.7 510 98.4
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 7.1e-239 830.5 512 80.3
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 3.2e-231 805.1 512 77.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 3.2e-215 751.9 528 75.2
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 1.5e-212 743.0 512 71.5
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 9.0e-210 733.8 512 70.9
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 5.9e-209 731.1 525 69.7
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 6.5e-208 727.6 512 70.3
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 1.1e-207 726.9 512 70.3
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.6e-206 723.0 513 69.6
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.1e-206 722.6 512 70.1
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 3.6e-206 721.8 525 68.8
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 3.0e-205 718.8 512 69.5
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 8.7e-205 717.2 525 68.8
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 8.7e-205 717.2 525 68.8
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 8.7e-205 717.2 525 67.4
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 3.3e-204 715.3 513 69.6
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.3e-203 713.4 514 69.1
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.6e-203 713.0 512 68.6
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 2.2e-203 712.6 525 67.6
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 2.2e-203 712.6 514 69.5
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 1.8e-202 709.5 512 69.3
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 3.1e-202 708.8 514 68.9
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 4.1e-202 708.4 526 68.3
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 5.3e-202 708.0 514 68.1
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 9.1e-202 707.2 525 67.4
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 9.1e-202 707.2 515 68.7
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 3.4e-201 705.3 512 67.4
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 4.5e-201 704.9 508 67.9
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 7.7e-201 704.1 505 69.3
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.7e-200 703.0 508 68.5
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 1.1e-199 700.3 525 66.3
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 2.5e-199 699.1 512 67.8
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 4.2e-199 698.4 514 66.5
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 7.2e-199 697.6 514 66.5
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 9.4e-199 697.2 517 66.9
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.4e-197 693.3 512 67.2
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 1.8e-197 693.0 526 65.6
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 2.3e-197 692.6 512 67.4
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 3.0e-197 692.2 512 67.0
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 3.9e-197 691.8 512 66.8
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 2.6e-196 689.1 512 65.8
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 4.4e-196 688.3 501 66.5
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 5.7e-196 688.0 514 66.3
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 7.4e-196 687.6 525 64.6
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 7.4e-196 687.6 531 64.2
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 1.3e-195 686.8 512 66.2
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 2.8e-195 685.6 555 62.3
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 2.8e-195 685.6 525 65.0
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 2.8e-195 685.6 525 65.3
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 2.8e-195 685.6 512 66.2
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 1.1e-194 683.7 527 66.0
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 1.4e-194 683.3 516 66.1
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 2.2e-192 676.0 515 65.8
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 8.5e-192 674.1 566 60.6
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 2.5e-191 672.5 501 65.1
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 5.5e-191 671.4 527 64.1
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 7.2e-191 671.0 496 66.3
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 2.1e-190 669.5 512 64.3
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 1.4e-189 666.8 512 63.9
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 7.4e-188 661.0 511 64.6
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 9.7e-188 660.6 527 65.1
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 3.7e-187 658.7 536 62.1
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.1e-186 657.1 511 64.8
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 3.5e-185 652.1 512 64.3
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.5e-185 652.1 511 63.6
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 5.9e-185 651.4 465 70.3
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 1.0e-184 650.6 512 64.1
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.7e-184 649.8 510 63.7
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 1.7e-184 649.8 511 63.4
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 2.9e-184 649.0 511 63.8
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 3.8e-184 648.7 531 62.3
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 1.1e-183 647.1 512 62.3
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 3.2e-183 645.6 511 63.2
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 3.2e-183 645.6 547 61.1
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-182 643.7 483 67.3
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 4.7e-182 641.7 504 63.5
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 8.8e-181 637.5 532 61.7
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 2.0e-180 636.3 501 62.1
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.4e-178 630.2 512 62.3
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.6e-177 626.7 516 60.5
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 2.7e-177 625.9 516 60.5
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 2.7e-177 625.9 509 63.3
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 4.5e-177 625.2 503 61.2
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 5.9e-177 624.8 503 61.4
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 7.7e-177 624.4 510 63.7
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.9e-176 622.5 518 61.2
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 3.2e-175 619.0 506 63.0
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 4.2e-175 618.6 535 58.7
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 7.2e-175 617.8 515 60.0
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.4e-173 613.6 503 60.2
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 2.3e-173 612.8 504 62.3
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 1.7e-171 606.7 516 61.2
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 2.8e-171 605.9 516 61.0
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 4.8e-171 605.1 516 60.1
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 3.1e-170 602.4 519 59.0
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 4.1e-170 602.1 516 59.9
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 1.6e-169 600.1 512 61.1
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 3.5e-169 599.0 512 59.4
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 3.2e-167 592.4 388 78.6
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 2.2e-163 579.7 512 57.8
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 6.3e-163 578.2 502 58.4
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 7.0e-162 574.7 518 56.6
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 9.2e-162 574.3 512 58.2
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.0e-160 570.9 432 65.7
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 3.2e-154 549.3 442 63.1
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 6.2e-150 535.0 442 60.2
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 5.4e-146 521.9 471 58.6
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 3.0e-144 516.2 496 55.8
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 8.3e-139 498.0 354 70.9
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 4.1e-130 469.2 447 55.9
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 2.1e-126 456.8 387 59.2
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 1.9e-122 443.7 528 46.2
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 4.2e-122 442.6 510 46.5
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 7.6e-116 421.8 502 45.4
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.6e-97 360.9 472 42.6
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 9.7e-95 351.7 465 44.1
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 7.5e-55 219.2 136 77.2
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.3e-51 208.4 440 36.6
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 1.4e-40 171.8 123 67.5
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 1.2e-36 158.7 137 60.6
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 2.5e-26 124.4 289 34.3
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.8e-24 118.2 76 69.7
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.2e-21 107.5 72 70.8
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 3.2e-21 107.5 73 71.2
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 4.6e-20 103.6 104 55.8
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 7.8e-20 102.8 76 68.4
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-18 98.2 140 38.6
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 7.3e-18 96.3 80 60.0
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 1.5e-15 88.6 269 29.0
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-10 71.2 53 52.8
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 1.1e-08 65.9 121 36.4
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 1.2e-07 62.4 48 68.8


User provided reference genes

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