Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.2e-218 763.5 569 100.0
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.5e-197 693.3 609 82.8
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 1.2e-133 481.1 574 74.9
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 3.3e-104 383.3 554 67.0
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 1.4e-102 377.9 569 63.3
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 2.4e-102 377.1 574 63.8
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 1.3e-100 371.3 574 62.9
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 3.8e-100 369.8 576 62.3
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 4.0e-97 359.8 514 64.8
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 6.7e-97 359.0 574 62.7
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 8.8e-97 358.6 574 62.5
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 1.5e-96 357.8 574 62.9
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 2.0e-96 357.5 574 66.2
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 2.8e-95 353.6 579 57.3
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 5.9e-93 345.9 574 61.5
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 2.2e-92 344.0 574 62.0
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 3.8e-92 343.2 574 55.9
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 1.1e-91 341.7 579 61.3
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 4.2e-91 339.7 574 60.6
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 9.4e-91 338.6 574 62.5
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 2.1e-90 337.4 574 62.2
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 4.0e-89 333.2 576 59.7
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 5.2e-89 332.8 569 56.8
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 5.7e-88 329.3 574 61.0
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 7.5e-88 328.9 576 59.4
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 8.3e-87 325.5 574 59.4
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 8.3e-87 325.5 574 60.5
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 1.1e-86 325.1 514 60.9
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 1.8e-86 324.3 582 58.8
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 5.4e-86 322.8 644 50.9
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 7.0e-86 322.4 574 58.4
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 9.1e-86 322.0 576 57.6
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 1.2e-85 321.6 574 60.3
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 4.5e-85 319.7 577 58.4
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 2.9e-84 317.0 514 60.1
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 5.0e-84 316.2 574 59.6
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 6.6e-84 315.8 581 58.9
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 6.6e-84 315.8 574 59.9
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 1.1e-83 315.1 576 58.5
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 1.5e-83 314.7 574 59.1
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 2.5e-83 313.9 572 61.9
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 5.5e-83 312.8 574 57.7
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 4.7e-82 309.7 574 58.5
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 1.0e-81 308.5 574 58.4
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 1.4e-81 308.1 585 56.4
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 1.4e-81 308.1 574 59.9
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 2.3e-81 307.4 574 58.5
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 4.0e-81 306.6 574 55.6
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 4.0e-81 306.6 574 58.7
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 2.6e-80 303.9 585 57.8
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 4.4e-80 303.1 582 56.7
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 7.5e-80 302.4 496 51.6
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 1.7e-79 301.2 573 59.9
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 1.8e-78 297.7 574 57.1
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 1.2e-77 295.0 574 59.6
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 2.0e-77 294.3 574 53.7
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 5.0e-76 289.7 354 68.9
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 4.3e-75 286.6 574 52.6
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 4.7e-74 283.1 574 60.3
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 6.1e-74 282.7 539 54.0
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 9.8e-72 275.4 621 50.6
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 4.9e-71 273.1 574 56.6
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 4.1e-70 270.0 591 56.0
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 5.4e-70 269.6 579 56.1
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 7.0e-70 269.2 580 56.4
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 2.0e-69 267.7 574 58.0
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 7.8e-69 265.8 594 53.9
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 1.7e-68 264.6 574 56.4
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 2.3e-68 264.2 574 55.4
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 1.1e-67 261.9 456 60.3
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 4.3e-67 260.0 576 54.7
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 5.6e-67 259.6 577 55.1
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 7.3e-67 259.2 575 55.7
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 7.3e-67 259.2 674 52.7
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 2.8e-66 257.3 574 57.0
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 3.6e-66 256.9 580 56.0
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.1e-65 255.4 295 61.7
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 2.3e-65 254.2 591 50.1
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 5.2e-65 253.1 619 54.4
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 8.9e-65 252.3 580 55.5
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 1.5e-64 251.5 531 57.1
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 4.4e-64 250.0 574 58.0
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 4.4e-64 250.0 582 50.5
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 7.5e-64 249.2 456 64.7
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 9.8e-64 248.8 579 53.0
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.3e-63 248.4 304 57.9
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 2.4e-62 244.2 553 57.9
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 9.2e-62 242.3 587 48.2
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 1.6e-61 241.5 404 61.4
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 4.6e-61 240.0 575 53.7
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 4.6e-61 240.0 576 49.1
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 7.8e-61 239.2 576 56.4
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 1.8e-57 228.0 580 51.7
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 1.7e-55 221.5 534 34.3
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 3.7e-55 220.3 558 52.0
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 7.8e-53 212.6 582 51.4
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 5.6e-51 206.5 583 50.8
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 3.6e-50 203.8 200 67.5
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 1.4e-49 201.8 199 72.9
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 3.1e-49 200.7 586 46.4
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 3.4e-48 197.2 583 44.3
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 7.8e-37 159.5 147 55.8
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 1.9e-35 154.8 257 49.4
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 3.6e-34 150.6 535 45.0
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 7.1e-30 136.3 250 35.2
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 7.9e-29 132.9 114 64.0
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 1.5e-27 128.6 87 73.6
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 4.3e-27 127.1 121 56.2
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 4.0e-25 120.6 576 41.3
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.3e-23 115.5 114 55.3
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 2.7e-21 107.8 75 72.0
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 2.7e-21 107.8 75 72.0
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 1.8e-20 105.1 75 70.7
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 1.8e-20 105.1 75 66.7
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 4.3e-19 100.5 75 62.7
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 6.2e-18 96.7 66 68.2
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 3.8e-15 87.4 60 66.7
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 1.8e-12 78.6 121 67.8
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 1.8e-12 78.6 121 67.8
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 1.8e-12 78.6 121 67.8
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 2.5e-11 74.7 76 46.1
Duzib268G0075 Durio zibethinus HOM05D000101 ORTHO05D000089 9.0e-09 66.2 144 33.3
Gohir.A04G033550 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.9e-06 58.5 147 32.0
Duzib268G0689 Durio zibethinus HOM05D000101 ORTHO05D000089 2.5e-06 58.2 164 30.5
Gorai.009G379600 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.5e-06 58.2 137 32.8
Duzib268G1464 Durio zibethinus HOM05D000101 ORTHO05D000089 3.2e-06 57.8 164 30.5
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 4.2e-06 57.4 40 72.5
PSO017G1403 Papaver somniferum HOM05D006395 ORTHO05D007894 7.2e-06 56.6 88 40.9
Thecc.07G078700 Theobroma cacao HOM05D006220 ORTHO05D007590 7.2e-06 56.6 59 52.5


User provided reference genes

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