Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 0.0e+00 1305.4 654 100.0
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 0.0e+00 1248.4 654 96.2
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 5.2e-303 1043.9 655 81.7
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 4.2e-276 954.5 620 77.9
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 9.3e-260 900.2 655 72.2
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.0e-213 747.3 663 58.5
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.7e-213 746.5 651 59.6
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.5e-212 743.4 661 58.7
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 5.6e-212 741.5 649 59.3
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.2e-211 740.3 667 57.9
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.1e-211 738.0 668 57.6
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 8.0e-211 737.6 666 58.1
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 8.9e-210 734.2 668 57.2
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 1.1e-207 727.2 667 56.5
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.8e-207 726.5 665 58.5
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 7.0e-207 724.5 657 57.4
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 5.9e-206 721.5 661 58.1
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.3e-205 720.3 656 58.4
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 1.7e-205 719.9 661 57.5
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.7e-205 719.9 656 59.0
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 3.9e-205 718.8 657 56.6
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 5.0e-205 718.4 651 58.4
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.5e-204 716.8 661 57.9
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.9e-204 716.5 670 57.2
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 2.5e-204 716.1 657 58.3
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 9.5e-204 714.1 664 57.5
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 1.2e-203 713.8 665 57.1
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 1.2e-203 713.8 664 57.4
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 6.2e-203 711.4 673 56.8
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.0e-202 710.7 654 57.6
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 1.8e-202 709.9 659 56.4
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 4.0e-202 708.8 655 56.9
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 8.9e-202 707.6 655 58.5
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 9.8e-201 704.1 654 57.3
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 8.3e-200 701.0 672 56.7
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 1.4e-199 700.3 666 56.5
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.1e-199 698.7 674 55.8
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.1e-199 698.7 674 55.8
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 1.6e-198 696.8 654 56.1
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.6e-198 696.8 759 52.4
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.0e-198 696.4 664 55.3
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 2.7e-198 696.0 659 56.0
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.7e-198 696.0 671 55.0
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 1.0e-197 694.1 659 56.0
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 3.9e-197 692.2 654 56.1
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 5.0e-197 691.8 659 55.7
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.6e-196 688.3 630 57.9
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 7.3e-196 688.0 661 54.0
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 8.1e-195 684.5 635 57.6
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.0e-193 679.9 638 56.0
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 9.9e-193 677.6 658 54.7
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 2.2e-192 676.4 663 54.0
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 2.9e-192 676.0 664 55.6
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 8.3e-192 674.5 663 54.0
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 1.1e-191 674.1 661 54.3
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 1.2e-190 670.6 663 54.8
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 2.1e-190 669.8 660 54.7
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 6.0e-190 668.3 661 53.1
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 2.3e-189 666.4 662 54.1
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 3.9e-189 665.6 645 55.2
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 3.9e-189 665.6 663 54.0
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.6e-189 664.8 668 53.6
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.1e-188 664.1 658 54.6
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 6.2e-187 658.3 665 54.1
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 6.8e-186 654.8 631 54.5
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 2.0e-185 653.3 658 54.3
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 5.8e-185 651.7 581 58.7
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 2.9e-184 649.4 908 42.8
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.4e-183 647.1 660 52.9
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 3.2e-183 646.0 654 54.4
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 3.2e-183 646.0 663 53.4
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 9.2e-183 644.4 676 52.8
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 2.7e-182 642.9 658 54.1
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 3.5e-182 642.5 654 54.0
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 2.3e-181 639.8 655 51.6
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 3.0e-181 639.4 647 51.9
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 1.5e-180 637.1 655 52.2
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 7.3e-180 634.8 654 52.3
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 6.9e-178 628.2 649 51.9
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 2.0e-177 626.7 654 51.5
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 2.6e-177 626.3 739 47.8
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 4.4e-177 625.5 649 51.9
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 7.6e-177 624.8 653 51.3
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 4.9e-176 622.1 650 51.4
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.4e-175 620.5 671 50.7
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 9.3e-175 617.8 648 51.1
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 3.5e-174 615.9 656 50.6
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 4.6e-174 615.5 671 49.6
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 5.1e-173 612.1 656 49.8
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 6.6e-173 611.7 653 50.8
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 6.6e-173 611.7 651 49.5
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 2.5e-172 609.8 657 49.3
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 8.1e-171 604.7 672 49.3
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 1.1e-167 594.3 657 48.9
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 2.6e-161 573.2 530 56.8
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 9.9e-161 571.2 670 47.8
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 4.9e-160 568.9 662 47.1
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 5.5e-159 565.5 665 47.1
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 3.0e-149 533.1 667 43.8
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 2.2e-139 500.4 554 48.2
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 8.2e-139 498.4 678 45.3
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.0e-133 481.5 707 40.0
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 4.5e-129 466.1 497 50.9
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 4.5e-129 466.1 649 42.1
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 6.1e-118 429.1 543 45.3
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 1.8e-85 321.2 716 31.7
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 3.4e-84 317.0 295 57.3
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.2e-76 292.0 643 30.5
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 1.3e-75 288.5 670 33.3
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 6.0e-73 279.6 547 36.0
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.4e-69 268.5 346 44.8
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 5.4e-58 229.9 162 72.2
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.8e-45 188.3 146 70.5
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 4.8e-38 163.7 403 31.0
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 2.1e-33 148.3 135 57.0
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.1e-32 143.7 348 30.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 6.7e-32 143.3 162 46.3
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.2e-27 128.3 156 51.3
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 1.6e-25 122.1 250 34.8
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 4.1e-21 107.5 98 58.2
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 5.5e-18 97.1 58 75.9
AUR62041250 Chenopodium quinoa HOM05D005966 ORTHO05D007584 3.9e-16 90.9 48 95.8
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.7e-14 85.5 57 70.2
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 1.8e-13 82.0 85 50.6
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 5.3e-13 80.5 110 39.1
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 2.2e-11 75.1 49 71.4
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 2.7e-09 68.2 64 54.7
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 2.3e-08 65.1 60 53.3
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 7.4e-07 60.1 37 78.4
AUR62038683 Chenopodium quinoa HOM05D006331 ORTHO05D137630 3.7e-06 57.8 31 90.3
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 3.7e-06 57.8 37 75.7


User provided reference genes

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