Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033001 Chenopodium quinoa HOM05D003159 ORTHO05D044021 0.0e+00 1102.4 550 100.0
AUR62033003 Chenopodium quinoa HOM05D039885 ORTHO05D044021 3.2e-120 436.4 222 92.3
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 1.4e-70 271.6 233 57.1
EL10Ac4g10130 Beta vulgaris HOM05D001013 ORTHO05D004597 1.4e-70 271.6 233 57.1
EL10Ac4g10132 Beta vulgaris HOM05D001013 ORTHO05D004597 8.9e-70 268.9 233 56.7
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 1.0e-57 228.8 161 77.0
AUR62025606 Chenopodium quinoa HOM05D039885 ORTHO05D137741 7.5e-53 212.6 230 49.1
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 3.5e-50 203.8 161 69.6
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 2.3e-49 201.1 161 67.7
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 8.6e-49 199.1 161 67.7
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 1.2e-47 195.3 161 67.7
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 2.1e-47 194.5 129 76.7
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 2.8e-47 194.1 161 65.2
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 2.8e-47 194.1 161 65.8
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 3.6e-47 193.7 161 65.8
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 4.7e-47 193.4 150 68.0
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 6.2e-47 193.0 161 63.4
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 6.2e-47 193.0 161 65.2
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 8.1e-47 192.6 161 64.6
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 8.1e-47 192.6 161 65.2
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 1.1e-46 192.2 161 65.2
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 1.4e-46 191.8 161 64.0
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 1.4e-46 191.8 161 65.2
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 4.0e-46 190.3 161 64.6
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 4.0e-46 190.3 161 64.6
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 5.2e-46 189.9 161 62.7
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 5.2e-46 189.9 161 64.0
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 6.8e-46 189.5 161 64.6
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 8.9e-46 189.1 161 64.0
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 8.9e-46 189.1 161 64.6
Actinidia06676 Actinidia chinensis HOM05D003159 ORTHO05D003780 1.2e-45 188.7 161 63.4
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 1.2e-45 188.7 161 64.0
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 1.5e-45 188.3 161 64.0
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 2.0e-45 188.0 162 65.4
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 2.6e-45 187.6 161 63.4
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 3.4e-45 187.2 161 62.7
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 3.4e-45 187.2 161 62.7
FAN12G4313 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.4e-45 187.2 150 66.0
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 3.4e-45 187.2 161 63.4
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.4e-45 186.8 161 63.4
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 5.8e-45 186.4 157 65.0
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 5.8e-45 186.4 161 62.1
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 5.8e-45 186.4 161 63.4
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 5.8e-45 186.4 161 63.4
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 7.6e-45 186.0 161 64.0
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 9.9e-45 185.7 159 63.5
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 9.9e-45 185.7 161 62.7
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 9.9e-45 185.7 161 62.7
Cpa.g.sc162.3 Carica papaya HOM05D003159 ORTHO05D003780 1.3e-44 185.3 161 62.1
FAN12G0237 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.3e-44 185.3 159 62.9
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 1.3e-44 185.3 150 65.3
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 1.3e-44 185.3 161 63.4
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 1.3e-44 185.3 161 62.7
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 1.3e-44 185.3 161 62.1
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 1.3e-44 185.3 161 63.4
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 1.7e-44 184.9 161 62.1
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 1.7e-44 184.9 161 62.1
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 2.2e-44 184.5 161 61.5
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 2.2e-44 184.5 161 63.4
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 2.2e-44 184.5 150 64.7
CSS0018975 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 2.9e-44 184.1 168 58.9
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 2.9e-44 184.1 161 64.0
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 3.8e-44 183.7 161 62.7
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 3.8e-44 183.7 150 64.0
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 4.9e-44 183.3 161 62.7
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 6.4e-44 183.0 161 62.1
FAN11G2158 Fragaria x ananassa HOM05D003159 ORTHO05D003780 6.4e-44 183.0 148 64.9
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 6.4e-44 183.0 159 62.3
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 6.4e-44 183.0 161 61.5
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 6.4e-44 183.0 152 65.8
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 6.4e-44 183.0 161 62.7
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 6.4e-44 183.0 161 62.7
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 8.4e-44 182.6 161 61.5
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 1.1e-43 182.2 150 63.3
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 1.9e-43 181.4 161 61.5
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.9e-43 181.4 161 60.9
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 2.4e-43 181.0 161 62.7
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 2.4e-43 181.0 161 63.4
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 2.4e-43 181.0 161 62.1
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 3.2e-43 180.6 161 60.9
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 3.2e-43 180.6 161 60.9
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 4.2e-43 180.3 161 59.6
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 4.2e-43 180.3 161 63.4
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 5.4e-43 179.9 161 60.9
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 7.1e-43 179.5 150 63.3
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 9.2e-43 179.1 161 61.5
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 1.2e-42 178.7 161 60.2
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 1.6e-42 178.3 161 62.1
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 1.6e-42 178.3 161 62.7
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 1.6e-42 178.3 161 61.5
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 1.6e-42 178.3 161 59.6
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.6e-42 178.3 161 59.6
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 1.6e-42 178.3 157 61.8
DCAR_028952 Daucus carota HOM05D003159 ORTHO05D003780 2.1e-42 177.9 161 59.6
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 2.1e-42 177.9 161 62.1
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.1e-42 177.9 161 60.2
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 2.7e-42 177.6 161 59.6
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 2.7e-42 177.6 170 58.8
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 3.5e-42 177.2 161 59.6
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 3.5e-42 177.2 163 57.7
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 4.6e-42 176.8 161 62.1
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 7.8e-42 176.0 150 61.3
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.3e-41 175.3 163 57.7
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 1.7e-41 174.9 162 61.1
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 1.7e-41 174.9 161 59.0
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 2.3e-41 174.5 150 62.0
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 2.3e-41 174.5 150 62.0
PSO782G2873 Papaver somniferum HOM05D003159 ORTHO05D003780 2.3e-41 174.5 150 62.0
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 3.9e-41 173.7 161 61.5
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 3.9e-41 173.7 161 60.9
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 3.9e-41 173.7 161 61.5
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 3.9e-41 173.7 161 59.6
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 5.1e-41 173.3 150 63.3
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 5.1e-41 173.3 161 61.5
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 5.1e-41 173.3 161 61.5
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 5.1e-41 173.3 161 61.5
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 5.1e-41 173.3 161 61.5
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 6.6e-41 172.9 161 60.9
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 1.1e-40 172.2 161 60.2
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 1.1e-40 172.2 161 58.4
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 1.5e-40 171.8 161 60.9
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 1.5e-40 171.8 161 60.9
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 2.5e-40 171.0 161 57.8
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 3.3e-40 170.6 161 58.4
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 4.3e-40 170.2 185 54.6
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 4.3e-40 170.2 161 57.1
CDE05G1140 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 5.6e-40 169.9 158 57.0
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 7.3e-40 169.5 161 59.0
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 7.3e-40 169.5 158 56.3
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 1.8e-38 164.9 140 67.1
SEGI_17525 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 2.4e-38 164.5 159 56.0
CSS0009274 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 4.0e-38 163.7 147 59.2
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 4.0e-38 163.7 198 48.5
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 3.4e-37 160.6 150 54.7
SHI06091 Sapria himalayana HOM05D003159 ORTHO05D003780 9.9e-37 159.1 150 53.3
Zm00001eb120570 Zea mays HOM05D003159 ORTHO05D003780 2.9e-36 157.5 150 55.3
Zm00001eb284760 Zea mays HOM05D003159 ORTHO05D003780 1.9e-35 154.8 150 54.7
FAN02G3581 Fragaria x ananassa HOM05D001720 ORTHO05D001813 2.4e-35 154.5 121 68.6
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 5.4e-35 153.3 161 53.4
FAN20G0704 Fragaria x ananassa HOM05D003159 ORTHO05D003780 7.1e-35 152.9 121 67.8
AagrBONN_evm.TU.Sc2ySwM_368.1733 Anthoceros agrestis HOM05D003159 ORTHO05D003780 2.7e-34 151.0 161 52.2
Haze_20967 Corylus avellana HOM05D003159 ORTHO05D003780 3.0e-33 147.5 136 60.3
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.9e-32 144.8 154 52.6
AUR62025640 Chenopodium quinoa HOM05D039885 ORTHO05D138401 2.5e-32 144.4 202 43.1
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 7.3e-32 142.9 161 48.4
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.2e-29 135.6 169 46.7
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 1.5e-29 135.2 150 49.3
Nn1g02653 Nelumbo nucifera HOM05D003159 ORTHO05D003780 4.5e-29 133.7 116 62.1
TPR.G10778 Trifolium pratense HOM05D003159 ORTHO05D003780 8.4e-28 129.4 92 70.7
Lalb_Chr06g0166711 Lupinus albus HOM05D003159 ORTHO05D003780 1.4e-27 128.6 93 69.9
Lalb_Chr06g0166751 Lupinus albus HOM05D003159 ORTHO05D003780 1.4e-27 128.6 93 69.9
Ciclev10003992m.g Citrus clementina HOM05D003159 ORTHO05D003780 1.9e-27 128.3 106 64.2
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 2.7e-26 124.4 161 43.5
Nitab4.5_0000261g0140 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.3e-25 121.3 83 72.3
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 2.8e-23 114.4 219 36.5
Peaxi162Scf00135g01116 Petunia axillaris HOM05D003159 ORTHO05D003780 4.8e-23 113.6 108 61.1
PRCOL_00005277 Prasinoderma coloniale HOM05D003159 ORTHO05D003780 1.5e-21 108.6 159 44.0
MCO10G267 Micromonas commoda HOM05D003159 ORTHO05D003780 3.2e-19 100.9 152 38.2
FAN09G3226 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.2e-18 99.0 75 65.3
Cre12.g503300 Chlamydomonas reinhardtii HOM05D003159 ORTHO05D003780 4.8e-15 87.0 160 35.6
Atru.chr2.868 Acer truncatum HOM05D003159 ORTHO05D003780 1.3e-12 79.0 77 59.7
Cfa025150 Carpinus fangiana HOM05D003159 ORTHO05D003780 8.4e-12 76.3 164 32.9
Lalb_Chr06g0166701 Lupinus albus HOM05D003159 ORTHO05D003780 1.1e-11 75.9 50 74.0
Lalb_Chr06g0166741 Lupinus albus HOM05D003159 ORTHO05D003780 1.1e-11 75.9 50 74.0
Sabra19G0025800 Salix brachista HOM05D003159 ORTHO05D003780 7.1e-11 73.2 63 60.3
Atru.chr2.869 Acer truncatum HOM05D003159 ORTHO05D003780 2.7e-10 71.2 41 85.4
FAN09G4428 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.5e-10 70.9 46 76.1
RcHm_v2.0_Chr6g0278951 Rosa chinensis HOM05D003159 ORTHO05D003780 3.5e-10 70.9 65 58.5
RcHm_v2.0_Chr7g0214531 Rosa chinensis HOM05D003159 ORTHO05D003780 8.7e-09 66.2 65 56.9
AUR62010228 Chenopodium quinoa HOM05D003159 ORTHO05D003780 1.3e-07 62.4 50 66.0


User provided reference genes

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