Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 5.8e-211 737.3 362 100.0
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 4.4e-134 481.9 275 85.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 2.7e-131 472.6 294 82.0
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 9.2e-108 394.4 275 69.8
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 4.3e-97 359.0 259 67.6
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.0e-74 284.6 274 53.6
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 2.8e-72 276.6 269 52.0
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.5e-70 270.8 240 58.3
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 1.6e-59 234.2 272 46.7
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 9.7e-57 224.9 271 43.9
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 6.3e-56 222.2 271 44.3
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 6.9e-55 218.8 264 45.8
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 3.4e-54 216.5 276 43.8
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 1.7e-53 214.2 275 41.8
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 2.9e-53 213.4 277 42.2
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 2.9e-53 213.4 272 41.2
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 3.8e-53 213.0 257 44.0
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.4e-52 211.1 277 40.8
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 3.2e-52 209.9 272 42.6
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 3.2e-52 209.9 248 43.5
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 3.2e-52 209.9 272 41.5
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 9.4e-52 208.4 253 42.3
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 1.6e-51 207.6 262 45.4
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 7.9e-51 205.3 260 40.4
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.0e-50 204.9 258 43.4
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.0e-50 204.9 250 43.6
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 1.8e-50 204.1 253 41.9
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 1.8e-50 204.1 273 42.1
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 2.3e-50 203.8 274 43.4
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 3.0e-50 203.4 271 41.0
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 3.0e-50 203.4 271 43.5
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 3.0e-50 203.4 262 42.4
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.8e-50 201.8 266 42.5
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 1.1e-49 201.4 262 42.7
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 3.3e-49 199.9 255 40.8
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.3e-49 199.9 266 41.7
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 4.4e-49 199.5 255 40.8
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 4.4e-49 199.5 262 43.1
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 5.7e-49 199.1 264 42.4
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.3e-48 198.0 274 40.1
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.7e-48 197.6 251 41.4
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 3.7e-48 196.4 262 42.7
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 4.8e-48 196.1 288 40.3
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 4.8e-48 196.1 263 41.4
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.4e-47 194.5 271 39.9
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 1.4e-47 194.5 264 40.2
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.8e-47 194.1 253 39.9
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 2.4e-47 193.7 267 38.6
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 2.4e-47 193.7 258 42.6
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 3.1e-47 193.4 265 41.9
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 3.1e-47 193.4 258 40.7
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 3.1e-47 193.4 264 40.5
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 4.1e-47 193.0 253 39.5
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 4.1e-47 193.0 258 43.4
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 5.3e-47 192.6 264 40.5
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 6.9e-47 192.2 267 41.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.9e-47 192.2 242 41.7
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 1.2e-46 191.4 257 40.9
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 2.0e-46 190.7 274 39.8
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.6e-46 190.3 270 38.5
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 3.4e-46 189.9 260 41.5
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 7.7e-46 188.7 270 40.0
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 1.3e-45 188.0 277 38.6
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 1.3e-45 188.0 259 41.7
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.7e-45 187.6 279 38.7
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 2.2e-45 187.2 266 42.1
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 2.9e-45 186.8 240 39.6
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 8.5e-45 185.3 263 40.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 1.4e-44 184.5 251 40.2
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.9e-44 184.1 260 40.0
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 2.5e-44 183.7 277 36.5
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.2e-44 183.3 274 39.4
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 5.5e-44 182.6 273 39.9
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 5.5e-44 182.6 222 44.6
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 9.4e-44 181.8 255 41.2
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.6e-43 181.0 258 39.5
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 2.1e-43 180.6 283 39.2
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.7e-43 180.3 265 37.7
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 2.7e-43 180.3 283 39.2
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.7e-43 180.3 274 39.1
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 6.1e-43 179.1 264 40.2
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.0e-42 178.3 235 40.0
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 1.4e-42 177.9 240 38.3
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-42 177.6 264 40.9
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.0e-42 176.8 273 39.9
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 6.7e-42 175.6 274 38.7
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.1e-41 174.9 274 38.3
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 1.5e-41 174.5 264 39.4
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.5e-41 174.5 276 39.1
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 2.0e-41 174.1 233 42.1
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 2.0e-41 174.1 268 38.4
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.6e-41 173.7 274 38.3
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 5.7e-41 172.6 264 37.5
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 7.4e-41 172.2 262 38.5
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 2.8e-40 170.2 264 37.9
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 2.8e-40 170.2 268 38.8
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 3.7e-40 169.9 231 42.0
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 4.8e-40 169.5 268 36.9
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 6.3e-40 169.1 219 40.6
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.8e-39 167.5 266 37.6
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 2.4e-39 167.2 225 38.2
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 3.1e-39 166.8 253 37.5
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 7.0e-39 165.6 203 43.3
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 9.1e-39 165.2 260 38.1
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 1.2e-38 164.9 231 40.7
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 1.6e-38 164.5 199 43.2
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 2.0e-38 164.1 239 40.2
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 3.5e-38 163.3 263 37.3
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 3.5e-38 163.3 187 44.4
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 4.5e-38 162.9 264 36.7
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 4.5e-38 162.9 266 37.2
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 5.9e-38 162.5 264 36.4
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 5.9e-38 162.5 262 39.3
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.7e-37 161.0 235 40.4
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.9e-37 160.2 264 36.0
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 3.8e-37 159.8 264 36.7
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 3.8e-37 159.8 238 35.7
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 2.5e-36 157.1 218 40.8
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 7.2e-36 155.6 274 36.1
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 1.2e-35 154.8 249 36.5
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 1.6e-35 154.5 282 36.5
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.6e-35 154.5 262 34.7
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 6.1e-35 152.5 204 41.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 8.0e-35 152.1 267 35.6
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.0e-34 151.8 254 35.4
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 2.3e-34 150.6 273 33.7
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 2.3e-34 150.6 273 33.7
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 4.0e-34 149.8 253 33.6
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 5.2e-34 149.4 194 39.7
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 8.8e-34 148.7 186 40.9
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 2.0e-33 147.5 226 35.0
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 2.8e-32 143.7 220 38.6
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.3e-32 142.5 223 36.3
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 6.3e-32 142.5 142 52.1
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.1e-31 141.7 267 31.8
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.1e-31 141.7 267 31.8
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 1.8e-31 141.0 267 33.0
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 1.8e-31 141.0 267 33.0
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.2e-30 138.3 249 32.9
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.2e-30 138.3 279 33.3
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.7e-29 134.4 188 37.8
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.9e-28 131.0 219 34.2
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.9e-28 131.0 153 43.1
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 1.9e-28 131.0 187 41.2
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 2.5e-28 130.6 226 31.9
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 9.4e-28 128.6 221 33.0
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.4e-26 124.8 187 38.5
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 6.8e-26 122.5 233 33.5
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 1.2e-25 121.7 242 34.7
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 2.6e-25 120.6 223 35.0
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 3.7e-24 116.7 301 27.9
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.4e-23 114.8 287 27.5
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 1.8e-23 114.4 262 30.9
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.2e-22 111.7 127 48.0
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.2e-22 111.7 121 48.8
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.6e-22 111.3 104 53.8
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 8.6e-21 105.5 244 31.1
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.5e-20 104.8 242 31.0
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.0e-19 99.0 264 27.3
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 1.4e-18 98.2 175 31.4
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 5.7e-17 92.8 222 27.0
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 2.2e-16 90.9 169 32.5
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.8e-16 90.5 237 27.0
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 8.3e-16 89.0 240 27.9
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 9.2e-15 85.5 186 30.6
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 1.6e-14 84.7 77 49.4
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 3.5e-14 83.6 63 58.7
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 1.0e-13 82.0 94 43.6
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-13 80.9 138 37.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.9e-13 80.5 85 52.9
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 8.9e-10 68.9 72 48.6
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 5.8e-09 66.2 62 43.5
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 3.7e-08 63.5 56 50.0
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 1.1e-07 62.0 104 33.7
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 9.2e-07 58.9 75 40.0
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 2.7e-06 57.4 153 30.7
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 3.5e-06 57.0 87 40.2


User provided reference genes

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