Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 6.0e-83 310.8 163 100.0
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.3e-77 293.1 163 94.5
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 9.7e-57 223.8 163 76.1
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 3.7e-48 195.3 163 68.1
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 1.5e-33 146.7 180 53.3
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 9.1e-31 137.5 150 56.0
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 3.3e-28 129.0 166 50.0
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 1.5e-20 103.6 170 41.8
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 1.2e-19 100.5 156 41.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 2.1e-19 99.8 163 42.3
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.8e-18 96.7 161 40.4
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 5.2e-18 95.1 169 40.8
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 5.2e-18 95.1 169 40.8
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 8.9e-18 94.4 168 39.3
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 1.5e-17 93.6 160 40.6
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.6e-17 92.8 179 40.8
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 3.4e-17 92.4 157 45.9
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 5.8e-17 91.7 151 41.7
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.2e-16 89.7 160 40.0
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 2.2e-16 89.7 167 40.7
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.9e-16 89.4 168 39.9
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 6.4e-16 88.2 158 36.7
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.4e-15 87.0 180 41.7
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 4.1e-15 85.5 168 40.5
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 5.4e-15 85.1 180 43.3
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.2e-14 84.0 156 40.4
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.2e-14 84.0 160 38.1
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 2.0e-14 83.2 159 37.1
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 2.7e-14 82.8 114 43.9
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 6.0e-14 81.6 156 39.7
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.0e-13 80.9 156 39.1
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 2.5e-12 76.3 164 36.6
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 2.5e-12 76.3 153 37.9
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 3.3e-12 75.9 168 36.3
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 1.2e-11 73.9 170 39.4
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.2e-11 73.9 168 35.7
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.2e-11 73.9 153 38.6
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 1.6e-11 73.6 154 37.0
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 3.6e-11 72.4 157 33.1
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 3.6e-11 72.4 153 35.9
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.4e-10 70.5 152 40.1
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 1.4e-10 70.5 188 36.7
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.8e-10 70.1 145 37.2
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 1.8e-10 70.1 154 36.4
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.8e-10 70.1 155 37.4
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 2.3e-10 69.7 158 33.5
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 2.3e-10 69.7 153 36.6
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 3.1e-10 69.3 163 32.5
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 5.2e-10 68.6 168 35.1
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 6.8e-10 68.2 157 36.9
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 1.2e-09 67.4 141 34.8
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 2.0e-09 66.6 161 32.3
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 4.4e-09 65.5 111 36.9
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 4.4e-09 65.5 62 58.1
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 9.8e-09 64.3 190 34.2
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 9.8e-09 64.3 160 31.9
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.3e-08 63.9 161 31.7
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 1.3e-08 63.9 164 35.4
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.7e-08 63.5 102 38.2
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 1.7e-08 63.5 97 43.3
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.7e-08 63.5 97 43.3
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.7e-08 63.5 99 41.4
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.2e-08 63.2 108 38.9
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 2.9e-08 62.8 96 41.7
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 2.9e-08 62.8 125 35.2
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 3.7e-08 62.4 142 37.3
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 3.7e-08 62.4 183 32.2
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 3.7e-08 62.4 106 37.7
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 3.7e-08 62.4 89 46.1
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 8.3e-08 61.2 92 48.9
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 1.4e-07 60.5 102 40.2
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 2.4e-07 59.7 125 36.0
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 2.4e-07 59.7 89 44.9
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.4e-07 59.7 89 44.9
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.4e-07 59.7 66 51.5
Sopen06g014330 Solanum pennellii HOM05D000014 ORTHO05D010301 2.4e-07 59.7 140 35.7
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 5.4e-07 58.5 61 52.5
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 5.4e-07 58.5 99 45.5
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 9.2e-07 57.8 91 42.9
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 1.6e-06 57.0 93 44.1
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 1.6e-06 57.0 88 42.0
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.1e-06 56.6 98 44.9
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 2.1e-06 56.6 194 29.4
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 2.7e-06 56.2 146 33.6
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 3.5e-06 55.8 99 42.4
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 3.5e-06 55.8 68 50.0
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 3.5e-06 55.8 93 44.1
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 4.6e-06 55.5 94 41.5
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 6.0e-06 55.1 101 42.6
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.0e-06 55.1 78 42.3
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 6.0e-06 55.1 62 48.4
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 7.8e-06 54.7 60 53.3


User provided reference genes

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