Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.1e-74 283.5 168 100.0
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.1e-50 203.8 143 92.3
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 5.3e-50 201.4 166 61.4
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 6.7e-37 157.9 168 50.0
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 2.8e-35 152.5 168 48.2
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 6.3e-35 151.4 173 57.2
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 8.2e-35 151.0 168 48.2
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 8.2e-35 151.0 168 47.6
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 2.4e-34 149.4 167 49.1
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 4.1e-34 148.7 162 49.4
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 4.1e-34 148.7 163 48.5
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 5.3e-34 148.3 166 46.4
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 5.3e-34 148.3 168 47.0
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 9.1e-34 147.5 168 47.0
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 1.2e-33 147.1 166 46.4
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.6e-33 146.7 164 49.4
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 1.6e-33 146.7 186 46.8
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 4.5e-33 145.2 168 47.6
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 4.5e-33 145.2 164 49.4
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 1.3e-32 143.7 166 51.2
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 1.7e-32 143.3 162 47.5
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 2.9e-32 142.5 164 48.8
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 5.0e-32 141.7 195 42.6
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 8.5e-32 141.0 165 52.1
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.1e-31 140.6 163 44.8
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.9e-31 139.8 168 44.6
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 2.5e-31 139.4 173 57.2
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 4.2e-31 138.7 165 50.9
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 5.5e-31 138.3 168 54.2
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 1.2e-30 137.1 160 46.2
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.2e-30 137.1 169 45.0
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 4.7e-30 135.2 163 43.6
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 4.7e-30 135.2 168 44.0
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 6.1e-30 134.8 170 51.8
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 6.1e-30 134.8 168 42.9
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 6.1e-30 134.8 158 46.8
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 8.0e-30 134.4 166 45.8
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.4e-29 133.7 181 42.5
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.8e-29 133.3 173 53.2
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 1.8e-29 133.3 197 42.1
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 2.3e-29 132.9 162 46.3
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 3.0e-29 132.5 167 43.1
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 8.8e-29 131.0 168 42.3
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 1.2e-28 130.6 165 47.9
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.5e-28 130.2 160 46.9
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 2.0e-28 129.8 164 43.3
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 2.6e-28 129.4 158 46.2
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 3.4e-28 129.0 182 42.9
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 5.7e-28 128.3 163 40.5
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 5.7e-28 128.3 166 44.6
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 5.7e-28 128.3 163 43.6
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 7.5e-28 127.9 158 43.0
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 9.8e-28 127.5 158 43.7
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 9.8e-28 127.5 163 41.1
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 2.2e-27 126.3 161 44.1
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 3.7e-27 125.6 166 41.0
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 3.7e-27 125.6 163 38.7
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 4.8e-27 125.2 163 42.3
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 6.3e-27 124.8 168 42.3
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 5.4e-26 121.7 168 44.6
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 9.1e-26 120.9 161 42.9
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 4.5e-25 118.6 163 40.5
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 1.7e-24 116.7 168 41.1
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 2.2e-24 116.3 163 46.0
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 5.0e-24 115.2 189 37.0
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 3.2e-23 112.5 167 38.3
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 4.2e-23 112.1 159 42.8
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 2.1e-22 109.8 160 39.4
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 2.7e-22 109.4 189 42.9
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 8.0e-22 107.8 167 46.1
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 8.0e-22 107.8 168 40.5
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 1.0e-21 107.5 184 50.5
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.4e-21 107.1 199 36.2
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 3.0e-21 105.9 168 37.5
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 5.2e-21 105.1 163 39.3
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 8.8e-21 104.4 199 34.7
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-19 100.5 165 37.6
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 1.7e-19 100.1 170 39.4
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 3.7e-19 99.0 167 37.7
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 6.3e-19 98.2 96 57.3
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 6.3e-19 98.2 163 38.0
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 1.8e-18 96.7 194 37.1
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.8e-18 96.7 168 35.7
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.6e-17 93.6 83 57.8
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 4.5e-17 92.0 160 46.2
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 4.5e-17 92.0 128 39.8
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 4.5e-17 92.0 128 39.8
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 6.6e-16 88.2 161 37.3
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.9e-15 86.7 75 60.0
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.5e-15 86.3 178 34.8
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.5e-15 86.3 162 35.2
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 2.5e-15 86.3 76 55.3
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 5.6e-15 85.1 115 45.2
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 7.3e-15 84.7 163 33.1
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 3.0e-13 79.3 167 30.5
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 5.2e-13 78.6 165 32.1
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 1.5e-12 77.0 64 59.4
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 4.4e-12 75.5 61 54.1
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 4.4e-12 75.5 49 67.3
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 1.3e-11 73.9 73 45.2
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 2.9e-11 72.8 158 34.2
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.3e-11 71.2 161 31.1
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 8.3e-11 71.2 89 46.1
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 1.4e-10 70.5 76 48.7
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 1.8e-10 70.1 76 50.0
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 3.2e-10 69.3 68 51.5
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 9.2e-10 67.8 89 44.9
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 9.2e-10 67.8 89 44.9
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 9.2e-10 67.8 89 44.9
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 2.3e-08 63.2 85 42.4
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 3.0e-08 62.8 71 53.5
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 1.5e-07 60.5 162 29.6
BraA03t14903Z Brassica rapa HOM05D006778 ORTHO05D008341 1.9e-07 60.1 47 59.6
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 3.3e-07 59.3 133 30.8
unitig_749.g13722 Utricularia gibba HOM05D006778 ORTHO05D008341 7.3e-07 58.2 67 40.3
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 1.2e-06 57.4 53 56.6
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 8.0e-06 54.7 53 52.8


User provided reference genes

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