Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 6.2e-252 873.6 435 100.0
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.4e-203 713.0 435 80.7
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 2.0e-197 692.6 598 63.0
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 8.6e-185 650.6 518 65.4
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 4.9e-180 634.8 537 61.5
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 5.8e-173 611.3 537 59.2
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 5.8e-173 611.3 535 59.3
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 9.8e-173 610.5 536 59.0
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.3e-172 610.1 534 59.4
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 4.9e-172 608.2 537 59.0
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.9e-172 608.2 528 60.0
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 2.4e-171 605.9 509 61.9
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 6.0e-170 601.3 546 57.1
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 8.6e-169 597.4 506 60.9
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 8.6e-169 597.4 537 58.3
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.1e-167 592.8 544 57.5
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 3.6e-167 592.0 536 56.7
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 4.7e-167 591.7 532 58.5
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.1e-166 590.5 538 58.2
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.8e-166 589.7 533 58.3
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 4.0e-166 588.6 537 56.2
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 6.8e-166 587.8 535 58.5
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 8.9e-166 587.4 561 56.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.3e-164 583.6 511 60.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.9e-164 582.4 536 56.7
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 1.1e-163 580.5 544 56.8
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.1e-163 580.5 535 57.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.9e-163 579.7 535 57.9
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.4e-163 579.3 537 57.2
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.1e-163 578.6 537 57.4
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.2e-162 577.0 537 57.4
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.0e-161 573.9 539 57.7
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.3e-161 573.5 539 57.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.3e-161 573.5 535 57.4
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.7e-161 573.2 537 56.4
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 3.3e-160 568.9 533 55.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.2e-159 567.0 539 55.8
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 2.1e-159 566.2 537 57.2
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 8.9e-158 560.8 509 57.4
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 2.2e-156 556.2 543 55.2
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.9e-156 555.8 534 56.4
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 3.2e-155 552.4 532 55.1
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 4.2e-155 552.0 536 55.0
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.2e-154 550.4 543 54.0
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.6e-154 550.1 539 54.0
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 7.8e-154 547.7 620 49.4
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.0e-153 547.4 535 54.8
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.7e-153 546.6 544 53.9
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 2.3e-153 546.2 540 54.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 6.6e-153 544.7 533 53.5
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.9e-152 543.1 538 53.5
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 1.9e-152 543.1 620 49.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 3.3e-152 542.3 536 54.1
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 3.3e-152 542.3 538 53.3
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.3e-152 542.3 538 54.1
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 4.3e-152 542.0 538 53.3
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 5.6e-152 541.6 545 53.2
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 5.6e-152 541.6 538 53.9
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 9.6e-152 540.8 545 53.4
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.6e-151 540.0 539 52.5
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.6e-151 540.0 533 53.7
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.1e-151 539.7 538 53.7
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 3.1e-150 535.8 540 53.9
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 9.0e-150 534.3 538 53.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 4.4e-149 531.9 539 52.5
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 2.2e-148 529.6 542 52.6
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.2e-148 529.6 534 54.1
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.9e-148 529.3 539 53.8
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.4e-147 526.9 538 53.5
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 2.4e-147 526.2 488 56.8
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.1e-144 517.3 549 51.0
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 8.1e-143 511.1 531 50.8
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 4.9e-140 501.9 530 50.8
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 4.9e-140 501.9 529 50.9
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.9e-139 500.0 496 54.0
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 9.3e-139 497.7 534 50.7
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.2e-138 497.3 536 51.3
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.6e-138 495.4 500 53.8
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.0e-132 477.6 457 54.7
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 8.4e-132 474.6 580 45.7
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 8.4e-132 474.6 580 45.7
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 1.1e-131 474.2 499 50.7
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.4e-131 473.8 445 55.5
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.6e-130 468.8 568 48.4
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.6e-127 460.3 490 50.0
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.0e-124 451.1 472 53.2
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 7.4e-120 434.9 438 54.3
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 9.0e-118 427.9 542 44.3
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.4e-117 426.0 294 70.1
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 5.0e-116 422.2 442 52.9
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.7e-111 407.1 455 50.1
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.0e-108 397.9 293 67.6
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 8.5e-108 394.8 270 70.0
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 4.2e-107 392.5 310 63.9
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.8e-105 387.1 411 52.6
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 5.9e-101 372.1 212 90.1
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.1e-98 363.6 243 69.5
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 3.0e-97 359.8 436 47.0
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.3e-96 356.3 295 61.0
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.1e-94 351.3 510 41.6
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 2.8e-79 300.1 281 55.5
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.9e-76 290.0 343 50.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.9e-76 290.0 883 28.1
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.5e-75 287.0 302 51.3
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.1e-74 283.9 341 48.4
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.7e-74 282.7 846 28.1
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.5e-72 277.7 256 53.5
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 5.6e-67 259.2 281 53.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 4.3e-59 233.0 272 44.1
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 8.6e-52 208.8 244 48.4
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 9.5e-51 205.3 195 56.9
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 8.1e-50 202.2 196 56.1
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 2.9e-39 167.2 108 75.9
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.6e-29 134.8 105 66.7
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 2.4e-22 110.9 247 28.3
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.2e-14 83.6 243 26.3
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 3.0e-12 77.4 59 71.2
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 3.1e-09 67.4 158 29.7
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 4.1e-09 67.0 36 80.6
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.6e-08 64.3 71 43.7
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.1e-06 58.9 48 64.6
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 9.3e-06 55.8 49 53.1


User provided reference genes

Program Settings