Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.8e-124 449.1 212 100.0
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 7.8e-99 364.0 196 90.8
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.1e-97 360.1 186 91.9
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 2.1e-96 355.9 221 81.0
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 3.6e-96 355.1 224 77.2
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.4e-95 353.2 224 76.8
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 3.4e-94 348.6 222 77.0
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 9.9e-94 347.1 222 76.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.3e-93 346.7 222 76.1
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.3e-93 346.7 222 75.2
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 2.2e-93 345.9 200 84.5
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.2e-93 345.9 222 75.7
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.9e-93 345.5 200 83.5
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 4.9e-93 344.7 200 84.0
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 6.4e-93 344.4 200 84.0
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.4e-92 343.2 222 76.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.4e-92 343.2 218 77.1
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.4e-92 342.4 200 83.5
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.4e-92 342.4 224 75.0
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.2e-92 342.0 222 76.1
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 4.2e-92 341.7 200 81.5
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 5.4e-92 341.3 200 82.5
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 9.3e-92 340.5 218 75.2
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 9.3e-92 340.5 201 83.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 9.3e-92 340.5 222 74.8
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.2e-91 340.1 201 82.6
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.2e-91 340.1 200 82.5
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.2e-91 340.1 222 75.7
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.6e-91 339.7 222 75.7
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 1.6e-91 339.7 249 70.3
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 2.7e-91 339.0 200 82.5
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.5e-91 338.6 222 74.8
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.6e-91 338.2 196 83.2
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 6.0e-91 337.8 223 74.9
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.0e-91 337.8 223 74.9
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 6.0e-91 337.8 225 74.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 6.0e-91 337.8 225 74.2
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 7.8e-91 337.4 227 75.8
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 7.8e-91 337.4 200 81.5
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.0e-90 337.0 221 75.6
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.0e-90 337.0 200 82.5
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 1.0e-90 337.0 211 75.4
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.0e-90 337.0 222 73.4
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.0e-90 337.0 225 74.2
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.3e-90 336.7 221 76.0
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.3e-90 335.9 225 73.8
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.3e-90 335.9 222 73.0
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.3e-90 335.9 222 74.8
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 3.0e-90 335.5 222 74.3
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.0e-90 335.5 201 81.6
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 3.0e-90 335.5 221 74.2
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.0e-90 335.5 223 75.3
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.0e-90 335.5 223 75.3
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 8.7e-90 334.0 222 74.3
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 8.7e-90 334.0 200 80.5
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.7e-90 334.0 222 73.9
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 8.7e-90 334.0 200 78.5
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 8.7e-90 334.0 200 81.0
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 8.7e-90 334.0 222 74.3
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.7e-90 334.0 223 76.2
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 8.7e-90 334.0 201 81.1
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.5e-89 333.2 222 73.4
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.5e-89 333.2 222 74.3
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.9e-89 332.8 222 74.3
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.5e-89 332.4 223 73.5
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.5e-89 332.4 200 80.0
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.5e-89 332.4 223 74.0
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 3.3e-89 332.0 200 80.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.3e-89 332.0 222 73.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 3.3e-89 332.0 222 74.3
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 3.3e-89 332.0 200 80.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.3e-89 332.0 229 72.9
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.3e-89 331.6 222 73.4
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 5.6e-89 331.3 223 74.9
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 5.6e-89 331.3 223 74.9
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 5.6e-89 331.3 229 72.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 5.6e-89 331.3 222 73.0
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 7.3e-89 330.9 200 80.5
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 7.3e-89 330.9 223 74.4
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 9.6e-89 330.5 200 80.0
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 1.3e-88 330.1 223 74.4
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.3e-88 330.1 201 80.1
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.3e-88 330.1 223 74.4
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.3e-88 330.1 223 74.4
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.3e-88 330.1 222 73.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.3e-88 330.1 227 72.2
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.6e-88 328.6 200 80.5
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 4.8e-88 328.2 222 73.9
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.8e-88 328.2 236 70.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 8.1e-88 327.4 223 74.0
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.8e-87 326.2 223 73.1
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.8e-87 326.2 197 80.7
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 2.4e-87 325.9 223 74.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 3.1e-87 325.5 201 80.6
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 4.0e-87 325.1 222 73.9
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.3e-87 324.7 223 72.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 6.9e-87 324.3 222 71.6
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 6.9e-87 324.3 200 77.5
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 1.2e-86 323.6 223 73.1
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.2e-86 323.6 199 79.4
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 2.6e-86 322.4 223 72.2
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 2.6e-86 322.4 223 72.2
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 2.6e-86 322.4 223 72.2
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 2.6e-86 322.4 223 72.2
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 2.6e-86 322.4 223 72.2
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.6e-86 322.4 210 74.3
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 4.4e-86 321.6 197 79.7
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 4.4e-86 321.6 200 77.5
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 5.8e-86 321.2 222 72.1
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.8e-86 321.2 201 78.1
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 5.8e-86 321.2 201 78.1
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 9.9e-86 320.5 219 72.6
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.7e-85 319.7 221 74.2
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.8e-85 318.5 223 72.2
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 6.4e-85 317.8 203 77.3
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 6.4e-85 317.8 225 71.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.1e-84 317.0 198 76.8
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.9e-84 316.2 186 82.3
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 4.2e-84 315.1 199 76.9
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 9.3e-84 313.9 254 65.4
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.1e-83 312.8 198 75.8
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 3.5e-83 312.0 222 68.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 4.6e-83 311.6 213 72.8
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 4.6e-83 311.6 198 75.8
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 2.3e-82 309.3 223 70.9
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.0e-82 308.9 208 73.6
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.1e-81 307.0 222 69.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 1.9e-81 306.2 211 72.0
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.9e-81 306.2 200 76.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 3.3e-81 305.4 217 71.0
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 4.3e-81 305.1 227 68.7
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.3e-80 303.5 203 73.4
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.6e-80 303.1 203 73.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 2.1e-80 302.8 211 71.1
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 2.8e-80 302.4 205 74.1
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-79 300.4 202 72.3
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 3.1e-79 298.9 200 73.0
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 4.0e-79 298.5 181 80.1
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 5.3e-79 298.1 219 68.9
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 9.0e-79 297.4 188 73.4
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.0e-78 296.2 201 73.6
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 8.4e-77 290.8 191 72.8
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.1e-76 290.4 179 78.8
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.1e-76 290.4 227 65.2
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.4e-76 290.0 180 79.4
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 3.2e-76 288.9 177 79.7
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 7.1e-76 287.7 200 71.0
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.3e-74 283.5 203 69.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 8.7e-74 280.8 243 60.5
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 8.7e-74 280.8 201 70.6
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.9e-73 279.6 222 66.7
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 2.5e-73 279.3 200 70.0
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 7.4e-73 277.7 202 67.3
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 8.1e-72 274.2 202 68.3
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.8e-71 273.1 200 67.0
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 6.9e-71 271.2 226 63.7
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 3.4e-70 268.9 200 66.5
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.1e-67 259.6 200 66.0
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 6.7e-66 254.6 204 62.7
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 1.5e-65 253.4 213 65.3
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.8e-64 248.4 199 61.3
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 9.3e-60 234.2 196 57.7
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.1e-57 227.3 221 52.9
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.5e-46 190.3 101 88.1
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.6e-46 189.5 235 48.9
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 2.5e-44 183.0 101 85.1
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.0e-42 176.0 101 81.2
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.0e-41 173.3 101 80.2
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 2.4e-39 166.4 101 77.2
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 5.3e-39 165.2 117 65.8
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.2e-38 164.1 101 74.3
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.9e-36 156.8 113 75.2
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 8.2e-32 141.4 98 67.3
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 1.1e-28 131.0 213 34.3
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 4.1e-23 112.5 232 28.9
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 4.1e-23 112.5 278 27.7
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.9e-20 103.6 270 26.3
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.1e-19 100.1 136 41.9
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 1.0e-18 97.8 82 52.4
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.6e-17 93.2 82 50.0


User provided reference genes

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