Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.0e-248 860.1 429 100.0
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.4e-224 782.7 477 84.5
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.8e-188 662.1 475 71.2
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.5e-178 629.8 475 70.5
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.7e-159 565.8 479 63.5
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.5e-128 463.0 421 58.9
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.5e-128 463.0 373 61.9
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 5.2e-126 455.3 443 53.3
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.2e-125 454.1 420 56.0
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.0e-125 453.4 418 56.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 5.8e-125 451.8 458 51.7
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 7.5e-125 451.4 333 64.6
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.3e-124 450.7 418 55.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.1e-123 447.6 428 53.3
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 3.2e-123 446.0 428 53.3
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 2.1e-122 443.4 481 52.2
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.7e-122 443.0 458 51.5
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.3e-121 440.7 439 52.8
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.3e-121 439.9 381 57.7
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.3e-121 439.9 457 50.3
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 2.5e-120 436.4 441 50.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.5e-120 436.4 420 53.6
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 9.5e-120 434.5 420 53.6
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 9.5e-120 434.5 489 48.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.2e-119 434.1 482 49.6
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 2.1e-119 433.3 451 51.7
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.8e-119 433.0 429 51.5
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 2.8e-119 433.0 460 50.7
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.6e-119 432.6 423 53.0
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 3.6e-119 432.6 469 49.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.6e-119 432.6 417 52.0
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 6.2e-119 431.8 421 52.7
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.1e-118 431.0 459 50.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.8e-118 430.3 420 53.3
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 3.1e-118 429.5 422 53.1
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 4.0e-118 429.1 450 51.1
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 4.0e-118 429.1 414 54.1
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 4.0e-118 429.1 420 52.4
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 4.0e-118 429.1 423 51.5
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 4.0e-118 429.1 422 52.6
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 6.8e-118 428.3 420 52.6
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 8.9e-118 427.9 453 50.6
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.2e-117 427.6 423 52.2
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.5e-117 427.2 422 51.4
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.6e-117 426.4 454 50.2
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 2.6e-117 426.4 471 48.6
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.6e-117 426.4 414 53.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 4.4e-117 425.6 448 50.9
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 9.9e-117 424.5 427 51.8
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 3.7e-116 422.5 440 51.1
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 3.7e-116 422.5 469 49.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 4.9e-116 422.2 416 52.4
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-115 421.0 423 51.1
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.4e-115 420.6 426 51.6
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.2e-115 419.5 555 44.5
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.6e-114 417.2 417 50.8
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.6e-114 417.2 417 52.3
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.1e-114 416.8 468 48.7
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 2.1e-114 416.8 423 50.1
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.7e-114 416.4 412 52.2
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.6e-114 415.6 461 47.5
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.3e-113 414.1 422 50.5
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.3e-113 414.1 399 53.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 5.1e-113 412.1 420 51.4
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.5e-112 410.6 329 59.9
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 3.3e-112 409.5 414 50.0
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 4.3e-112 409.1 414 52.7
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 5.6e-112 408.7 420 49.3
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 7.3e-112 408.3 438 50.7
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 7.3e-112 408.3 474 47.3
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.8e-111 406.4 475 46.7
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 6.2e-111 405.2 468 45.9
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.4e-110 404.1 415 51.8
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.8e-110 403.7 406 50.7
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.2e-110 402.1 444 48.4
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 2.6e-109 399.8 413 50.4
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 4.4e-109 399.1 415 51.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 5.8e-109 398.7 474 46.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 2.9e-108 396.4 419 50.6
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.9e-108 395.6 389 52.4
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 6.4e-108 395.2 464 47.8
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.4e-107 394.0 422 50.7
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 7.1e-107 391.7 417 48.0
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.2e-106 391.0 465 44.3
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.7e-106 389.8 326 57.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.4e-102 376.7 389 51.4
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 3.1e-102 376.3 491 43.8
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 7.6e-101 371.7 418 46.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 9.9e-101 371.3 454 46.0
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 2.2e-100 370.2 320 55.6
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.1e-99 367.9 444 45.7
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 7.1e-99 365.2 459 46.0
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.1e-96 357.8 473 43.3
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-91 341.3 300 54.3
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 7.1e-91 338.6 389 46.8
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 9.3e-91 338.2 280 58.9
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.2e-90 337.8 412 45.1
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.0e-82 308.9 430 42.6
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.1e-78 298.1 380 45.5
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 3.4e-77 293.1 331 50.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.1e-74 282.3 414 38.2
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 7.4e-72 275.4 430 36.7
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 3.9e-65 253.1 413 35.6
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 3.4e-61 240.0 225 53.8
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.2e-59 233.4 177 62.1
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 6.1e-58 229.2 398 35.4
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.2e-49 199.5 214 48.6
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 3.2e-43 180.3 300 40.3
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.7e-37 160.6 206 47.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.6e-34 151.4 434 27.4
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 6.1e-34 149.4 99 68.7
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 4.0e-33 146.7 315 34.9
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.1e-30 138.7 117 55.6
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.2e-29 135.2 103 60.2
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.4e-22 110.9 87 60.9
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.9e-19 101.3 90 52.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.5e-19 100.9 326 24.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 7.0e-14 82.8 68 61.8
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.7e-13 80.9 51 64.7
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 4.6e-13 80.1 74 59.5
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.6e-12 76.3 98 37.8
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.6e-10 71.6 112 43.8
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 8.1e-10 69.3 47 76.6
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.4e-09 68.6 44 84.1
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 1.8e-09 68.2 50 70.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.8e-09 66.2 43 76.7


User provided reference genes

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