Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.2e-64 248.8 126 100.0
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.7e-53 212.6 109 96.3
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 6.0e-46 187.6 109 86.2
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.8e-42 176.0 137 70.1
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 6.0e-38 161.0 110 74.5
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 3.1e-34 148.7 119 63.9
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 3.9e-29 131.7 112 59.8
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.1e-27 125.9 112 55.4
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 4.7e-27 124.8 112 54.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 6.2e-27 124.4 110 55.5
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.4e-26 122.5 108 57.4
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 5.2e-26 121.3 120 54.2
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 2.6e-25 119.0 121 52.1
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 7.6e-25 117.5 116 52.6
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.7e-24 116.3 118 51.7
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 2.2e-24 115.9 122 50.0
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.9e-24 115.5 127 50.4
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 6.4e-24 114.4 123 51.2
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.9e-23 112.8 112 52.7
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 7.1e-23 110.9 117 54.7
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.2e-22 110.2 118 50.0
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.5e-22 108.6 117 54.7
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 7.8e-22 107.5 127 48.8
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 3.0e-21 105.5 116 48.3
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 5.1e-21 104.8 125 49.6
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.1e-20 103.6 98 52.0
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 2.5e-20 102.4 125 48.0
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 2.5e-20 102.4 112 49.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 4.3e-20 101.7 123 50.4
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 5.6e-20 101.3 120 46.7
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.4e-18 96.7 125 44.0
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.4e-18 95.9 110 47.3
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 4.0e-18 95.1 130 44.6
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.0e-18 95.1 101 47.5
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 5.3e-18 94.7 101 47.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 2.0e-17 92.8 110 46.4
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.4e-17 92.0 103 46.6
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 4.4e-17 91.7 93 50.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 9.9e-17 90.5 114 45.6
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 9.9e-17 90.5 151 37.7
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.2e-16 89.4 109 46.8
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 3.8e-16 88.6 106 42.5
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-15 87.0 87 49.4
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-15 87.0 123 39.0
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 2.4e-15 85.9 106 39.6
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.4e-15 85.9 116 45.7
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.2e-15 85.1 86 48.8
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 7.1e-15 84.3 96 50.0
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 7.1e-15 84.3 116 44.0
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 1.6e-14 83.2 116 44.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 4.6e-14 81.6 114 35.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 7.9e-14 80.9 112 42.0
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.3e-13 80.1 117 40.2
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 3.0e-13 79.0 105 41.0
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 5.1e-13 78.2 132 37.9
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 6.6e-13 77.8 82 46.3
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 4.3e-12 75.1 71 49.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 1.3e-11 73.6 89 42.7
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.1e-11 72.8 86 46.5
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 2.8e-11 72.4 90 46.7
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 2.8e-11 72.4 115 39.1
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 3.6e-11 72.0 86 47.7
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 4.8e-11 71.6 122 36.1
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-10 70.1 118 41.5
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.4e-10 70.1 110 37.3
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 1.8e-10 69.7 86 45.3
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.1e-10 68.9 101 38.6
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.0e-10 68.6 86 44.2
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 5.3e-10 68.2 101 36.6
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 5.3e-10 68.2 101 36.6
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 5.3e-10 68.2 101 37.6
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.5e-09 66.6 86 43.0
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 4.5e-09 65.1 101 35.6
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 5.8e-09 64.7 101 34.7
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 5.8e-09 64.7 101 35.6
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 9.9e-09 63.9 86 41.9
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 4.9e-08 61.6 115 33.0
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 6.4e-08 61.2 101 34.7
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 2.4e-07 59.3 101 32.7
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 4.6e-06 55.1 68 45.6


User provided reference genes

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