Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.1e-107 391.7 189 100.0
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.7e-103 377.9 189 97.4
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 8.8e-86 320.5 185 80.5
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.4e-85 318.5 185 80.0
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.3e-80 302.0 188 74.5
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.3e-73 280.0 189 68.8
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 4.7e-71 271.6 185 65.4
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.7e-71 271.6 189 66.1
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.8e-70 269.6 189 65.1
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.3e-70 269.2 186 65.6
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.3e-70 269.2 189 66.1
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.3e-70 269.2 189 66.1
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.1e-70 268.9 186 65.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.9e-70 267.3 189 65.6
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-69 266.9 187 65.2
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-69 266.5 187 65.2
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 3.4e-69 265.4 186 64.5
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 3.4e-69 265.4 182 65.9
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 9.8e-69 263.8 186 63.4
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.7e-68 263.1 185 64.3
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 2.9e-68 262.3 190 64.7
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 6.4e-68 261.2 189 63.5
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 8.3e-68 260.8 186 65.1
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 8.3e-68 260.8 184 63.6
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.4e-67 260.0 181 65.2
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.9e-67 259.6 186 64.5
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.9e-67 259.6 186 64.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.9e-67 259.6 183 65.6
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 4.1e-67 258.5 189 63.5
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 5.4e-67 258.1 190 63.7
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 7.0e-67 257.7 184 62.0
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 7.0e-67 257.7 189 63.0
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 9.2e-67 257.3 189 64.6
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.2e-66 256.9 189 61.4
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.2e-66 256.9 186 62.4
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.2e-66 256.9 190 63.7
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.6e-66 256.5 186 64.0
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 2.7e-66 255.8 182 67.0
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 3.5e-66 255.4 182 65.9
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.6e-66 255.0 184 65.8
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 4.6e-66 255.0 182 65.9
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 7.8e-66 254.2 185 63.2
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 7.8e-66 254.2 187 63.1
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.0e-65 253.8 183 65.0
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.3e-65 253.4 184 65.2
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.3e-65 253.4 184 60.9
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.7e-65 253.1 183 63.9
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-65 252.7 183 61.2
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-65 252.7 183 61.2
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 2.3e-65 252.7 190 61.1
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 5.0e-65 251.5 189 62.4
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 5.0e-65 251.5 182 63.2
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 6.6e-65 251.1 186 62.4
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 6.6e-65 251.1 183 63.4
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 8.6e-65 250.8 189 60.3
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.1e-64 250.4 182 63.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.1e-64 250.4 186 62.9
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.1e-64 250.4 186 61.3
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.1e-64 250.4 186 61.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.9e-64 249.6 185 63.2
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.9e-64 249.6 186 61.8
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 2.5e-64 249.2 183 60.7
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.5e-64 249.2 183 60.7
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 7.3e-64 247.7 190 61.1
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 9.5e-64 247.3 186 61.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 9.5e-64 247.3 185 60.5
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.6e-63 246.5 186 60.8
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.6e-63 246.5 188 64.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.6e-63 246.5 184 61.4
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 2.1e-63 246.1 186 60.8
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 2.1e-63 246.1 185 60.0
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 3.6e-63 245.4 188 61.2
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 4.7e-63 245.0 189 61.4
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 4.7e-63 245.0 186 60.8
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 6.2e-63 244.6 186 60.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.2e-63 244.6 183 59.6
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 8.0e-63 244.2 205 57.6
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 8.0e-63 244.2 190 61.1
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 2.3e-62 242.7 183 60.1
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.9e-62 240.7 186 57.5
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 8.9e-62 240.7 188 58.5
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.2e-61 240.4 186 58.6
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.2e-61 240.4 188 61.7
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.5e-61 240.0 186 58.6
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.4e-61 238.4 186 58.1
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.3e-60 236.9 186 57.5
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.3e-60 236.9 186 57.5
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.3e-60 236.9 217 54.4
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.9e-60 235.7 187 58.3
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.9e-60 235.0 187 57.8
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.4e-60 234.6 188 58.5
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 8.3e-60 234.2 186 58.1
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.1e-59 233.8 181 59.7
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.4e-59 233.4 188 56.4
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 5.4e-59 231.5 190 58.9
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 3.5e-58 228.8 183 55.7
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.3e-57 226.9 222 49.5
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.0e-57 225.7 190 55.3
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-56 223.0 189 55.6
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.9e-56 223.0 188 57.4
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.2e-55 220.3 148 65.5
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.2e-55 220.3 189 57.1
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.8e-55 219.2 188 55.9
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 5.2e-54 214.9 185 54.6
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 6.8e-54 214.5 185 54.6
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.2e-53 213.8 189 55.6
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.2e-53 213.8 183 52.5
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.5e-53 213.4 185 54.6
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 3.4e-53 212.2 185 54.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.4e-53 212.2 189 54.0
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 3.4e-53 212.2 176 58.0
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.2e-52 209.5 179 58.7
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 2.3e-49 199.5 185 49.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.3e-48 195.3 189 50.3
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 4.3e-48 195.3 146 59.6
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 9.9e-45 184.1 185 46.5
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.4e-43 179.5 109 80.7
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.4e-43 179.5 189 48.7
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.2e-42 177.2 187 46.0
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.0e-42 174.9 135 56.3
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.4e-27 127.1 83 66.3
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 4.2e-27 125.6 111 53.2
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 7.1e-27 124.8 82 69.5
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.1e-22 109.4 101 55.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.2e-20 103.2 120 47.5
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.2e-15 84.7 96 47.9
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 5.1e-09 65.5 187 26.7
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 4.3e-08 62.4 78 42.3


User provided reference genes

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