Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 0.0e+00 1116.7 542 100.0
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 0.0e+00 1087.0 542 97.6
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 4.9e-262 907.5 523 85.3
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 2.0e-247 859.0 564 75.7
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 3.2e-229 798.5 469 79.3
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 4.1e-229 798.1 535 72.3
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 6.0e-228 794.3 550 70.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 1.3e-227 793.1 467 80.1
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.9e-226 789.3 555 71.4
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.5e-226 788.9 461 80.3
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 9.6e-226 786.9 461 79.4
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.1e-225 785.8 545 71.6
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 3.6e-225 785.0 461 80.0
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 6.2e-225 784.3 545 70.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 8.1e-225 783.9 545 70.5
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.4e-224 783.1 469 78.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.4e-224 783.1 555 71.0
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.4e-224 783.1 470 78.9
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.4e-224 783.1 541 71.7
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.0e-224 781.6 472 78.2
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 5.2e-224 781.2 537 71.7
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 8.9e-224 780.4 474 78.1
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 1.5e-223 779.6 561 69.9
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 2.6e-223 778.9 544 71.0
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.8e-223 777.7 482 75.7
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 5.8e-223 777.7 461 79.4
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 1.3e-222 776.5 536 70.9
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 1.3e-222 776.5 505 73.1
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.7e-222 776.2 469 78.9
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.2e-222 775.8 547 70.0
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 3.8e-222 775.0 550 70.0
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 3.8e-222 775.0 537 71.1
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.8e-222 775.0 549 69.9
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 4.9e-222 774.6 535 71.8
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 6.4e-222 774.2 461 78.7
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 8.4e-222 773.9 552 69.6
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.1e-221 773.5 542 70.7
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 3.2e-221 771.9 456 79.6
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.2e-221 771.9 468 78.0
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 4.2e-221 771.5 461 77.7
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 5.4e-221 771.2 553 68.9
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 7.1e-221 770.8 529 70.5
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.3e-221 770.4 540 70.6
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.6e-220 769.6 515 71.8
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 3.5e-220 768.5 461 79.8
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 3.5e-220 768.5 508 73.6
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.0e-219 766.9 545 69.7
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-219 766.5 541 70.4
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.7e-219 766.1 541 70.4
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 2.3e-219 765.8 541 69.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 3.0e-219 765.4 504 72.8
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 3.9e-219 765.0 539 70.3
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 6.6e-219 764.2 540 67.8
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 6.6e-219 764.2 548 71.0
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.9e-218 762.7 513 72.1
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.6e-218 761.1 541 69.7
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 7.3e-218 760.8 546 69.2
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.8e-217 758.8 464 75.6
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 8.1e-217 757.3 481 73.4
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 8.1e-217 757.3 556 68.5
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 1.1e-216 756.9 465 76.1
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 1.8e-216 756.1 623 62.1
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 3.1e-216 755.4 469 75.5
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 9.0e-216 753.8 463 77.1
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.7e-214 749.6 562 67.6
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 8.4e-214 747.3 467 75.4
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 2.4e-213 745.7 492 71.7
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.4e-213 745.7 461 76.8
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 1.2e-212 743.4 464 75.9
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.1e-212 742.7 537 69.6
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.3e-211 739.2 572 64.7
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 3.0e-211 738.8 490 73.1
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 3.9e-211 738.4 482 73.7
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 6.6e-211 737.6 469 75.1
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 1.9e-210 736.1 509 70.5
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.5e-210 735.7 555 67.9
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 2.5e-210 735.7 479 72.9
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 5.6e-210 734.6 522 68.8
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 4.8e-209 731.5 461 74.4
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 4.8e-209 731.5 526 68.4
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 6.2e-209 731.1 459 75.2
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 1.8e-208 729.6 511 70.3
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 1.8e-208 729.6 459 75.2
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.1e-208 728.8 469 74.0
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 4.0e-208 728.4 483 71.0
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.5e-207 726.5 421 80.3
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.6e-207 725.7 521 69.9
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 4.5e-207 724.9 517 69.2
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 9.9e-207 723.8 528 68.2
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.2e-206 722.6 525 68.6
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.9e-205 719.5 436 76.4
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.9e-205 719.5 421 80.0
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 2.4e-205 719.2 530 67.7
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.2e-204 716.8 644 59.3
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 3.5e-204 715.3 515 68.7
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 6.0e-204 714.5 515 68.7
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.9e-203 711.8 479 72.2
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.3e-201 706.8 553 64.4
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.3e-201 706.8 537 67.4
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.3e-198 696.8 536 64.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 8.4e-198 694.1 536 64.2
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 2.6e-191 672.5 458 68.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 1.7e-190 669.8 469 71.9
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 6.5e-190 667.9 469 68.7
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 4.6e-188 661.8 442 70.8
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.1e-184 650.6 459 66.4
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.1e-184 650.6 466 66.3
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 3.4e-183 645.6 463 65.7
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 9.4e-181 637.5 421 71.0
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.2e-180 637.1 473 63.2
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 5.1e-179 631.7 463 65.4
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 2.2e-177 626.3 449 65.5
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.5e-175 620.2 460 64.6
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 2.2e-174 616.3 465 64.9
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 3.0e-171 605.9 467 64.9
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.4e-170 601.3 466 63.5
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.1e-168 595.9 355 78.0
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.2e-166 589.7 458 62.7
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.1e-165 587.4 456 61.2
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.2e-161 573.2 484 59.5
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 7.7e-159 564.7 462 58.9
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.3e-141 506.1 394 67.3
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 5.2e-139 498.8 349 69.3
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 3.1e-123 446.4 502 47.6
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.0e-118 431.4 418 51.2
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 2.3e-118 430.3 269 77.0
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.4e-115 421.0 315 65.7
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.5e-114 417.5 256 76.2
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.1e-104 384.8 261 68.2
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.1e-96 358.2 328 57.6
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.9e-88 330.9 255 60.4
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 4.8e-84 316.2 223 68.6
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 4.0e-83 313.2 213 65.7
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.3e-78 298.1 242 59.9
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 3.9e-62 243.4 141 83.0
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 8.5e-57 225.7 162 64.8
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 6.7e-54 216.1 144 70.8
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.7e-47 193.4 113 76.1
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 2.9e-41 174.1 101 84.2
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 6.5e-41 172.9 157 59.2
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 8.8e-38 162.5 176 52.8
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 7.5e-37 159.5 91 76.9
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.2e-32 143.7 115 62.6
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.7e-31 140.2 129 56.6
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 5.9e-18 96.7 113 52.2
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.8e-14 85.1 57 59.6
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.1e-11 75.9 56 66.1
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 4.1e-11 73.9 58 69.0
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 7.8e-10 69.7 50 74.0
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 7.8e-10 69.7 50 74.0
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.8e-06 58.5 58 62.1


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