Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027614 Chenopodium quinoa HOM05D003364 ORTHO05D003795 2.4e-44 181.8 94 100.0
AUR62030232 Chenopodium quinoa HOM05D003364 ORTHO05D003795 6.0e-43 177.2 94 98.9
EL10As10g23959 Beta vulgaris HOM05D003364 ORTHO05D003795 1.2e-35 152.9 93 84.9
Ah.09g232710 Amaranthus hybridus HOM05D000736 ORTHO05D007313 8.1e-32 140.2 94 77.7
Hund12309 Selenicereus undatus HOM05D003364 ORTHO05D003795 9.0e-31 136.7 93 75.3
Cpa.g.sc5.126 Carica papaya HOM05D003364 ORTHO05D003795 2.2e-29 132.1 93 72.0
GSVIVG01033713001 Vitis vinifera HOM05D003364 ORTHO05D003795 8.4e-29 130.2 93 71.0
vmacro07356 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 1.4e-28 129.4 93 74.2
HanXRQChr11g0345961 Helianthus annuus HOM05D003364 ORTHO05D003795 3.2e-28 128.3 94 70.2
Dinv35835 Davidia involucrata HOM05D003364 ORTHO05D003795 5.5e-28 127.5 93 69.9
AUR62040195 Chenopodium quinoa HOM05D003364 ORTHO05D003795 7.1e-28 127.1 89 69.7
Thhalv10023701m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 7.1e-28 127.1 93 71.0
Aa31LG10G8290 Aethionema arabicum HOM05D003364 ORTHO05D003795 9.3e-28 126.7 93 71.0
Sabra06G0093800 Salix brachista HOM05D003364 ORTHO05D003795 1.6e-27 125.9 93 69.9
Haze_19478 Corylus avellana HOM05D003364 ORTHO05D003795 2.7e-27 125.2 93 69.9
Thhalv10010721m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 2.7e-27 125.2 93 69.9
Sp5g09200 Schrenkiella parvula HOM05D003364 ORTHO05D003795 3.5e-27 124.8 93 68.8
Thecc.05G075500 Theobroma cacao HOM05D003364 ORTHO05D003795 3.5e-27 124.8 93 66.7
Potri.006G119200 Populus trichocarpa HOM05D003364 ORTHO05D003795 4.6e-27 124.4 89 71.9
CSS0050150 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 6.0e-27 124.0 93 69.9
BcaC02g09182 Brassica carinata HOM05D003364 ORTHO05D003795 7.9e-27 123.6 93 67.7
BolC4t25549H Brassica oleracea HOM05D003364 ORTHO05D003795 7.9e-27 123.6 93 67.7
Dinv37357 Davidia involucrata HOM05D003364 ORTHO05D003795 7.9e-27 123.6 93 68.8
Rhsim04G0138800 Rhododendron simsii HOM05D003364 ORTHO05D003795 7.9e-27 123.6 93 69.9
ECA248G1326 Erigeron canadensis HOM05D003364 ORTHO05D003795 1.0e-26 123.2 90 68.9
Prupe.7G123000 Prunus persica HOM05D003364 ORTHO05D003795 1.0e-26 123.2 93 64.5
PGR142G3973 Punica granatum HOM05D003364 ORTHO05D003795 1.0e-26 123.2 93 68.8
Rhsim03G0085800 Rhododendron simsii HOM05D003364 ORTHO05D003795 1.0e-26 123.2 93 69.9
CSS0026446 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 1.3e-26 122.9 93 66.7
Nn6g35170 Nelumbo nucifera HOM05D003364 ORTHO05D003795 1.3e-26 122.9 91 71.4
AT3G53120 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 1.8e-26 122.5 91 68.1
A04p06260 Brassica napus HOM05D003364 ORTHO05D003795 1.8e-26 122.5 93 66.7
BraA04t16331Z Brassica rapa HOM05D003364 ORTHO05D003795 1.8e-26 122.5 93 66.7
CiPaw.09G005100 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.8e-26 122.5 93 68.8
Ciclev10009355m.g Citrus clementina HOM05D003364 ORTHO05D003795 1.8e-26 122.5 91 67.0
THA.LOC104818582 Tarenaya hassleriana HOM05D003364 ORTHO05D003795 1.8e-26 122.5 91 68.1
BcaB02g08535 Brassica carinata HOM05D003364 ORTHO05D003795 2.3e-26 122.1 93 66.7
CSS0048678 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 2.3e-26 122.1 93 66.7
CARHR162970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 2.3e-26 122.1 93 66.7
Nitab4.5_0005208g0010 Nicotiana tabacum HOM05D003364 ORTHO05D003795 2.3e-26 122.1 93 67.7
Duzib128G0277 Durio zibethinus HOM05D003364 ORTHO05D003795 3.0e-26 121.7 93 63.4
Oeu040563.2 Olea europaea HOM05D003364 ORTHO05D003795 3.0e-26 121.7 86 69.8
Potri.016G097000 Populus trichocarpa HOM05D003364 ORTHO05D003795 3.0e-26 121.7 93 65.6
AL5G34000 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 5.1e-26 120.9 91 68.1
Thhalv10017224m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 5.1e-26 120.9 93 65.6
Carub.0005s1965 Capsella rubella HOM05D003364 ORTHO05D003795 6.7e-26 120.6 91 67.0
vmacro08805 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 6.7e-26 120.6 93 66.7
AT2G36680 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 8.7e-26 120.2 93 65.6
HanXRQChr01g0019311 Helianthus annuus HOM05D003364 ORTHO05D003795 8.7e-26 120.2 94 67.0
MD12G1102900 Malus domestica HOM05D003364 ORTHO05D003795 8.7e-26 120.2 93 65.6
Peaxi162Scf00110g00816 Petunia axillaris HOM05D003364 ORTHO05D003795 8.7e-26 120.2 93 66.7
TWI74G0085 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 8.7e-26 120.2 93 65.6
Duzib106G1154 Durio zibethinus HOM05D003364 ORTHO05D003795 1.1e-25 119.8 93 65.6
Lj1A203T55 Lonicera japonica HOM05D003364 ORTHO05D003795 1.1e-25 119.8 93 66.7
Sp4g18950 Schrenkiella parvula HOM05D003364 ORTHO05D003795 1.1e-25 119.8 93 65.6
MSTRG.5787 Avicennia marina HOM05D003364 ORTHO05D003795 1.5e-25 119.4 93 66.7
CiPaw.10G002500 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.5e-25 119.4 90 68.9
RcHm_v2.0_Chr3g0471291 Rosa chinensis HOM05D003364 ORTHO05D003795 1.5e-25 119.4 93 66.7
Sabra16G0100200 Salix brachista HOM05D003364 ORTHO05D003795 1.5e-25 119.4 93 66.7
Sc20g0005750 Simmondsia chinensis HOM05D003364 ORTHO05D003795 1.5e-25 119.4 93 64.5
CARHR130970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 2.5e-25 118.6 93 64.5
Lj3A995G63 Lonicera japonica HOM05D003364 ORTHO05D003795 2.5e-25 118.6 89 70.8
QL07p041392 Quercus lobata HOM05D003364 ORTHO05D003795 2.5e-25 118.6 92 63.0
A05p09200 Brassica napus HOM05D003364 ORTHO05D003795 3.3e-25 118.2 93 63.4
BraA05t19876Z Brassica rapa HOM05D003364 ORTHO05D003795 3.3e-25 118.2 93 63.4
Duzib093G1696 Durio zibethinus HOM05D003364 ORTHO05D003795 3.3e-25 118.2 93 63.4
COL.COLO4_22254 Corchorus olitorius HOM05D003364 ORTHO05D003795 4.3e-25 117.9 93 64.5
SGA_v2.0_scaffold657G53379 Striga asiatica HOM05D003364 ORTHO05D003795 4.3e-25 117.9 90 65.6
Lsat_1_v5_gn_2_100520 Lactuca sativa HOM05D003364 ORTHO05D003795 5.6e-25 117.5 94 63.8
SalBow3G2337 Salvia bowleyana HOM05D003364 ORTHO05D003795 5.6e-25 117.5 93 62.4
AL4G32860 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 7.4e-25 117.1 93 64.5
Glyma.19G188300 Glycine max HOM05D003364 ORTHO05D003795 7.4e-25 117.1 91 64.8
TWI77G0900 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 7.4e-25 117.1 93 62.4
DCAR_020798 Daucus carota HOM05D003364 ORTHO05D003795 9.6e-25 116.7 93 64.5
TAR633G2316 Trochodendron aralioides HOM05D003364 ORTHO05D003795 9.6e-25 116.7 93 63.4
BcaC02g11785 Brassica carinata HOM05D003364 ORTHO05D003795 1.3e-24 116.3 93 63.4
C04p11370 Brassica napus HOM05D000165 ORTHO05D003795 1.3e-24 116.3 93 63.4
BolC4t22795H Brassica oleracea HOM05D003364 ORTHO05D003795 1.3e-24 116.3 93 63.4
MD14G1097000 Malus domestica HOM05D003364 ORTHO05D003795 1.3e-24 116.3 93 63.4
EL10Ac7g16703 Beta vulgaris HOM05D003364 ORTHO05D003795 1.6e-24 115.9 89 61.8
Gohir.A11G323000 Gossypium hirsutum HOM05D003364 ORTHO05D003795 1.6e-24 115.9 93 62.4
Oeu031866.1 Olea europaea HOM05D003364 ORTHO05D003795 1.6e-24 115.9 89 68.5
Gohir.D04G106900 Gossypium hirsutum HOM05D003364 ORTHO05D003795 2.1e-24 115.5 89 66.3
Gorai.009G411000 Gossypium raimondii HOM05D003364 ORTHO05D003795 2.1e-24 115.5 89 66.3
Psat3g038040 Pisum sativum HOM05D003364 ORTHO05D003795 2.1e-24 115.5 91 63.7
CAN.G541.25 Capsicum annuum HOM05D003364 ORTHO05D003795 2.8e-24 115.2 93 64.5
FvH4_6g17210 Fragaria vesca HOM05D003364 ORTHO05D003795 2.8e-24 115.2 93 64.5
FAN05G2073 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.8e-24 115.2 93 64.5
FAN05G5749 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.8e-24 115.2 93 64.5
FAN14G4580 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.8e-24 115.2 93 64.5
Lj1g0027813 Lotus japonicus HOM05D003364 ORTHO05D003795 2.8e-24 115.2 91 63.7
BcaB02g09341 Brassica carinata HOM05D003364 ORTHO05D003795 3.7e-24 114.8 93 63.4
Cc06_g04780 Coffea canephora HOM05D003364 ORTHO05D003795 3.7e-24 114.8 93 65.6
Aa31LG5G21880 Aethionema arabicum HOM05D003364 ORTHO05D003795 4.8e-24 114.4 93 65.6
BolC4t22777H Brassica oleracea HOM05D003364 ORTHO05D003795 4.8e-24 114.4 93 62.4
Carub.0004s1850 Capsella rubella HOM05D003364 ORTHO05D003795 4.8e-24 114.4 91 62.6
Gohir.D11G342100 Gossypium hirsutum HOM05D003364 ORTHO05D003795 4.8e-24 114.4 93 62.4
Gorai.007G372100 Gossypium raimondii HOM05D003364 ORTHO05D003795 4.8e-24 114.4 93 62.4
Manes.09G048862 Manihot esculenta HOM05D003364 ORTHO05D003795 4.8e-24 114.4 90 65.6
Oeu023984.1 Olea europaea HOM05D003364 ORTHO05D003795 4.8e-24 114.4 89 66.3
TPR.G31682 Trifolium pratense HOM05D003364 ORTHO05D003795 4.8e-24 114.4 91 60.4
QL07p041377 Quercus lobata HOM05D003364 ORTHO05D003795 6.2e-24 114.0 92 60.9
Eucgr.A01593 Eucalyptus grandis HOM05D003364 ORTHO05D003795 8.2e-24 113.6 93 60.2
Medtr7g102780 Medicago truncatula HOM05D003364 ORTHO05D003795 8.2e-24 113.6 91 61.5
Glyma.03G188100 Glycine max HOM05D003364 ORTHO05D003795 1.1e-23 113.2 91 62.6
MBI11_g29030_MAGBIO Magnolia biondii HOM05D003364 ORTHO05D003795 1.1e-23 113.2 86 66.3
SGA_v2.0_scaffold75G24816 Striga asiatica HOM05D003364 ORTHO05D003795 1.1e-23 113.2 93 60.2
Migut.J00474 Erythranthe guttata HOM05D003364 ORTHO05D003795 1.4e-23 112.8 93 63.4
FAN02G0897 Fragaria x ananassa HOM05D003364 ORTHO05D003795 1.4e-23 112.8 93 63.4
PGSC0003DMG400028179 Solanum tuberosum HOM05D003364 ORTHO05D003795 1.4e-23 112.8 93 63.4
Migut.J00476 Erythranthe guttata HOM05D003364 ORTHO05D003795 3.1e-23 111.7 93 62.4
Solyc10g083780.1 Solanum lycopersicum HOM05D003364 ORTHO05D003795 3.1e-23 111.7 93 62.4
Sopen10g033230 Solanum pennellii HOM05D003364 ORTHO05D003795 3.1e-23 111.7 93 62.4
Migut.F01371 Erythranthe guttata HOM05D003364 ORTHO05D003795 4.0e-23 111.3 93 62.4
Lsat_1_v5_gn_6_28160 Lactuca sativa HOM05D003364 ORTHO05D003795 4.0e-23 111.3 89 60.7
Manes.08G015900 Manihot esculenta HOM05D003364 ORTHO05D003795 5.3e-23 110.9 90 63.3
VMungo1383G1043 Vigna mungo HOM05D003364 ORTHO05D003795 6.9e-23 110.5 91 60.4
Ca_08937_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 9.0e-23 110.2 91 61.5
Ca_30110_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 9.0e-23 110.2 91 61.5
CSS0013430 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 1.2e-22 109.8 78 69.2
arahy.Tifrunner.gnm1.ann1.URL2CG Arachis hypogaea HOM05D003364 ORTHO05D003795 1.5e-22 109.4 91 58.2
Lalb_Chr02g0155361 Lupinus albus HOM05D003364 ORTHO05D003795 2.0e-22 109.0 91 59.3
PSO339G5958 Papaver somniferum HOM05D003364 ORTHO05D003795 2.0e-22 109.0 86 64.0
VMungo0720G0068 Vigna mungo HOM05D003364 ORTHO05D003795 2.6e-22 108.6 91 62.6
ATR1158G038 Amborella trichopoda HOM05D003364 ORTHO05D003795 3.4e-22 108.2 89 60.7
arahy.Tifrunner.gnm1.ann1.HU14K8 Arachis hypogaea HOM05D003364 ORTHO05D003795 3.4e-22 108.2 91 61.5
arahy.Tifrunner.gnm1.ann1.R92IIS Arachis hypogaea HOM05D003364 ORTHO05D003795 3.4e-22 108.2 91 61.5
Phvul.001G183500 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 3.4e-22 108.2 91 59.3
Aqoxy2G01564 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 4.5e-22 107.8 90 60.0
Gohir.A04G068400 Gossypium hirsutum HOM05D003364 ORTHO05D003795 4.5e-22 107.8 85 64.7
PSO801G0728 Papaver somniferum HOM05D003364 ORTHO05D003795 5.8e-22 107.5 86 62.8
Sopen10g035210 Solanum pennellii HOM05D003364 ORTHO05D003795 5.8e-22 107.5 89 62.9
Glyma.10G063400 Glycine max HOM05D003364 ORTHO05D003795 7.6e-22 107.1 91 59.3
Nitab4.5_0009839g0030 Nicotiana tabacum HOM05D003364 ORTHO05D003795 1.0e-21 106.7 89 61.8
PGSC0003DMG400008590 Solanum tuberosum HOM05D003364 ORTHO05D003795 1.0e-21 106.7 89 60.7
ECA233G2861 Erigeron canadensis HOM05D003364 ORTHO05D003795 1.3e-21 106.3 93 58.1
Glyma.13G147900 Glycine max HOM05D003364 ORTHO05D003795 1.3e-21 106.3 91 59.3
Sed0022654 Sechium edule HOM05D003364 ORTHO05D003795 1.7e-21 105.9 86 65.1
Solyc10g085810.2 Solanum lycopersicum HOM05D003364 ORTHO05D003795 1.7e-21 105.9 89 61.8
Nitab4.5_0000725g0070 Nicotiana tabacum HOM05D003364 ORTHO05D003795 2.9e-21 105.1 89 60.7
Zm00001eb006510 Zea mays HOM05D003364 ORTHO05D003795 2.9e-21 105.1 89 58.4
HanXRQChr13g0400531 Helianthus annuus HOM05D003364 ORTHO05D003795 6.5e-21 104.0 93 58.1
Phvul.007G226100 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 6.5e-21 104.0 91 60.4
DCAR_017653 Daucus carota HOM05D003364 ORTHO05D003795 8.4e-21 103.6 93 58.1
Oeu045244.1 Olea europaea HOM05D003364 ORTHO05D003795 1.1e-20 103.2 89 60.7
unitig_22.g5108 Utricularia gibba HOM05D003364 ORTHO05D003795 1.4e-20 102.8 89 58.4
Os03g0186800 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 1.9e-20 102.4 89 57.3
Peaxi162Scf00146g00018 Petunia axillaris HOM05D003364 ORTHO05D003795 1.9e-20 102.4 93 59.1
unitig_8.g4120 Utricularia gibba HOM05D003364 ORTHO05D003795 1.9e-20 102.4 89 57.3
Zm00001eb295110 Zea mays HOM05D003364 ORTHO05D003795 4.2e-20 101.3 89 56.2
Nn2g13901 Nelumbo nucifera HOM05D003364 ORTHO05D003795 5.5e-20 100.9 89 61.8
Os03g0572300 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 5.5e-20 100.9 89 56.2
Sed0015688 Sechium edule HOM05D003364 ORTHO05D003795 5.5e-20 100.9 89 59.6
CAN.G729.4 Capsicum annuum HOM05D003364 ORTHO05D003795 9.3e-20 100.1 88 60.2
ClCG10G019650 Citrullus lanatus HOM05D003364 ORTHO05D003795 1.6e-19 99.4 86 60.5
Lsat_1_v5_gn_1_64020 Lactuca sativa HOM05D003364 ORTHO05D003795 2.1e-19 99.0 94 57.4
CsaV3_3G036470 Cucumis sativus L. HOM05D003364 ORTHO05D003795 6.0e-19 97.4 86 59.3
BcaC03g18177 Brassica carinata HOM05D003364 ORTHO05D003795 7.9e-19 97.1 79 59.5
MELO3C009407.2 Cucumis melo HOM05D003364 ORTHO05D003795 7.9e-19 97.1 86 59.3
HPP92_020787 Vanilla planifolia HOM05D003364 ORTHO05D003795 1.0e-18 96.7 91 53.8
HPP92_020831 Vanilla planifolia HOM05D003364 ORTHO05D003795 1.0e-18 96.7 91 53.8
Actinidia32470 Actinidia chinensis HOM05D003364 ORTHO05D003795 3.0e-18 95.1 100 53.0
CDE05G1858 Ceratophyllum demersum HOM05D003364 ORTHO05D003795 6.7e-18 94.0 90 53.3
Zm00001eb401560 Zea mays HOM05D003364 ORTHO05D003795 1.5e-17 92.8 85 55.3
CDE11G0254 Ceratophyllum demersum HOM05D003364 ORTHO05D003795 2.2e-16 89.0 90 52.2
SEGI_00976 Sequoiadendron giganteum HOM05D003364 ORTHO05D003795 2.2e-16 89.0 89 55.1
Mapoly0070s0080 Marchantia polymorpha HOM05D003364 ORTHO05D003795 4.8e-16 87.8 90 51.1
SMO118G0276 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 6.3e-16 87.4 87 52.9
PSO063G6171 Papaver somniferum HOM05D003364 ORTHO05D003795 8.2e-16 87.0 93 53.8
PSO339G1192 Papaver somniferum HOM05D003364 ORTHO05D003795 8.2e-16 87.0 93 53.8
SMO147G0421 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 1.1e-15 86.7 87 51.7
SMO144G0012 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 1.8e-15 85.9 87 51.7
vmacro23001 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 1.8e-15 85.9 63 73.0
MBI19_g12832_MAGBIO Magnolia biondii HOM05D003364 ORTHO05D003795 3.1e-15 85.1 131 40.5
Pp3c2_570 Physcomitrium patens HOM05D003364 ORTHO05D003795 3.1e-15 85.1 91 50.5
A07p21390 Brassica napus HOM05D003364 ORTHO05D003795 5.3e-15 84.3 92 51.1
BraA07t29826Z Brassica rapa HOM05D003364 ORTHO05D003795 5.3e-15 84.3 92 51.1
CBR_g30234 Chara braunii HOM05D003364 ORTHO05D003795 1.2e-14 83.2 86 52.3
Pp3c1_40630 Physcomitrium patens HOM05D003364 ORTHO05D003795 2.0e-14 82.4 90 48.9
Pp3c14_24180 Physcomitrium patens HOM05D003364 ORTHO05D003795 7.7e-14 80.5 90 48.9
ATR0661G393 Amborella trichopoda HOM05D003364 ORTHO05D003795 3.2e-12 75.1 93 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2476 Anthoceros agrestis HOM05D003364 ORTHO05D003795 2.0e-09 65.9 81 38.3
Psat6g124000 Pisum sativum HOM05D003364 ORTHO05D003795 2.0e-09 65.9 65 53.8
Psat6g123960 Pisum sativum HOM05D003364 ORTHO05D003795 2.5e-09 65.5 71 49.3
CAN.G728.3 Capsicum annuum HOM05D003364 ORTHO05D003795 5.7e-09 64.3 61 54.1
CAN.G673.16 Capsicum annuum HOM05D003364 ORTHO05D003795 8.2e-08 60.5 61 50.8
AUR62042710 Chenopodium quinoa HOM05D003364 ORTHO05D003795 1.4e-07 59.7 38 73.7


User provided reference genes

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