Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.8e-259 898.7 422 100.0
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 1.2e-204 716.5 422 80.3
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.0e-174 617.1 305 92.8
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 8.6e-174 614.0 383 70.2
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 1.1e-165 587.0 361 70.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.8e-164 582.4 383 68.1
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 2.4e-163 579.3 364 70.3
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 3.1e-163 578.9 402 64.7
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 5.2e-163 578.2 364 69.5
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 5.2e-163 578.2 365 68.5
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 1.5e-162 576.6 374 69.5
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 1.5e-162 576.6 424 63.4
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 2.0e-162 576.2 365 70.1
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 2.0e-162 576.2 374 67.9
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 2.6e-162 575.9 412 64.6
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 4.4e-162 575.1 375 67.5
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 4.4e-162 575.1 392 65.6
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 9.9e-162 573.9 371 66.8
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 1.7e-161 573.2 386 65.3
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 2.2e-161 572.8 379 67.3
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 2.9e-161 572.4 376 68.1
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 3.8e-161 572.0 380 65.8
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 3.8e-161 572.0 382 66.5
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 4.9e-161 571.6 431 61.3
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 8.4e-161 570.9 366 68.6
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 8.4e-161 570.9 395 64.6
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 1.9e-160 569.7 388 63.7
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.4e-160 569.3 319 80.9
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.2e-160 568.9 361 68.1
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 3.2e-160 568.9 366 68.6
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 2.1e-159 566.2 399 63.4
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 2.7e-159 565.8 369 67.5
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 1.0e-158 563.9 412 63.1
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 3.9e-158 562.0 364 68.4
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 6.6e-158 561.2 422 61.6
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.1e-157 560.5 412 62.9
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 1.5e-157 560.1 361 67.6
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.9e-157 559.7 361 67.0
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.5e-157 559.3 364 66.8
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 3.3e-157 558.9 403 61.8
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 3.3e-157 558.9 374 65.2
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 3.3e-157 558.9 424 61.6
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 4.3e-157 558.5 398 63.6
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 5.6e-157 558.1 392 63.3
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 5.6e-157 558.1 395 63.0
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 1.3e-156 557.0 390 63.3
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 1.6e-156 556.6 378 65.1
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.8e-156 555.8 361 67.0
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.8e-156 555.8 402 61.7
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.1e-155 553.9 382 64.4
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 2.4e-155 552.7 387 63.6
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 3.1e-155 552.4 391 62.7
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 1.2e-154 550.4 389 63.0
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 2.6e-154 549.3 459 56.0
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 4.5e-154 548.5 362 66.0
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 5.8e-154 548.1 407 63.9
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 9.9e-154 547.4 392 63.8
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 2.2e-153 546.2 385 63.4
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 6.4e-153 544.7 373 65.4
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.1e-152 543.9 373 65.4
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 1.1e-152 543.9 441 57.6
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 1.4e-152 543.5 368 64.9
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.4e-152 543.5 390 62.6
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 1.9e-152 543.1 376 65.7
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 2.4e-152 542.7 374 64.4
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 4.2e-152 542.0 379 62.8
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 7.1e-152 541.2 352 67.3
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 7.1e-152 541.2 418 59.1
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 9.3e-152 540.8 387 63.3
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 9.3e-152 540.8 387 63.3
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 9.3e-152 540.8 401 60.1
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 1.2e-151 540.4 375 64.0
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 4.6e-151 538.5 381 65.4
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 4.6e-151 538.5 423 59.6
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 1.3e-150 537.0 388 61.6
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 2.3e-150 536.2 367 63.5
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 3.3e-149 532.3 397 61.7
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 4.3e-149 531.9 379 63.9
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 1.6e-148 530.0 393 59.8
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 8.1e-148 527.7 388 61.1
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 1.8e-147 526.6 403 59.6
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 5.3e-147 525.0 364 65.1
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 3.4e-146 522.3 346 67.9
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 2.9e-145 519.2 360 64.4
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 4.2e-144 515.4 361 62.9
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 5.5e-144 515.0 365 61.1
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 1.2e-143 513.8 347 67.4
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 9.6e-141 504.2 398 57.8
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 1.2e-138 497.3 367 59.4
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 3.4e-138 495.7 370 60.0
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 3.8e-137 492.3 339 64.9
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.9e-133 479.9 347 60.2
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 5.0e-129 465.3 363 56.5
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 9.3e-128 461.1 357 56.3
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.3e-126 456.4 413 50.6
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 2.3e-126 456.4 386 52.3
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.8e-126 454.5 291 68.7
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 1.1e-125 454.1 315 67.0
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 5.7e-125 451.8 411 50.4
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 2.0e-114 416.8 387 49.4
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 5.5e-112 408.7 370 50.8
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 8.8e-110 401.4 318 57.9
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 1.6e-95 354.0 278 60.1
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 2.1e-95 353.6 364 47.5
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 8.0e-95 351.7 225 71.1
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 2.3e-94 350.1 258 63.2
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 7.5e-93 345.1 407 47.7
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.3e-72 276.6 319 46.4
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 1.9e-67 260.8 232 56.0
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 4.1e-59 233.0 186 58.1
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 5.1e-57 226.1 189 55.6
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 1.8e-54 217.6 465 31.2
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 5.4e-51 206.1 233 45.5
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.8e-39 167.2 129 54.3
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.2e-29 135.2 102 56.9
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 1.6e-23 114.8 200 32.5
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 4.0e-22 110.2 90 58.9
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.8e-20 103.6 60 76.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 3.2e-19 100.5 61 73.8
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 3.0e-17 94.0 61 68.9
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 5.1e-17 93.2 75 52.0
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 5.9e-13 79.7 43 76.7
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 1.7e-12 78.2 63 55.6
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 8.5e-12 75.9 95 43.2
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 5.1e-09 66.6 51 60.8
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 2.5e-08 64.3 71 47.9


User provided reference genes

Program Settings