Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.8e-248 862.1 429 100.0
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 7.8e-247 856.7 429 98.8
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 9.9e-218 760.0 425 87.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.0e-194 682.6 433 79.2
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.2e-191 673.3 430 74.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.5e-189 665.6 431 74.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 3.3e-189 665.2 431 73.5
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 4.3e-189 664.8 431 73.3
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.4e-187 659.1 429 73.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.1e-187 658.7 430 72.6
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 4.1e-187 658.3 484 68.8
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.0e-185 653.7 429 73.0
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.2e-185 652.5 430 72.8
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.8e-185 651.7 439 71.3
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 5.0e-185 651.4 461 69.8
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.4e-184 649.8 439 71.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 5.5e-184 647.9 432 71.8
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-183 646.7 419 74.5
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.6e-183 646.4 425 72.9
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.1e-183 646.0 433 71.1
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.1e-183 646.0 439 70.8
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.7e-183 645.6 433 71.1
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.6e-183 645.2 431 72.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 3.6e-183 645.2 434 71.2
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 6.1e-183 644.4 433 70.7
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 7.9e-183 644.0 425 72.5
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.0e-182 643.7 431 71.7
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.8e-182 642.9 439 70.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.9e-182 641.7 431 71.5
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 5.1e-182 641.3 429 70.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 8.8e-182 640.6 456 69.7
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.0e-181 639.4 428 70.6
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 7.4e-181 637.5 431 71.5
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 9.7e-181 637.1 430 71.4
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.7e-180 636.3 431 72.4
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 6.9e-179 630.9 433 68.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.6e-178 629.0 430 70.7
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.0e-177 624.8 425 70.1
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.1e-176 623.6 430 71.9
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.4e-176 623.2 426 70.7
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.4e-176 623.2 418 72.0
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.4e-176 623.2 430 69.5
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.4e-176 623.2 418 73.0
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.2e-176 621.7 430 70.2
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.5e-176 621.3 418 70.1
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.6e-175 619.8 425 69.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.6e-175 619.8 412 71.6
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.6e-175 619.8 425 70.1
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.1e-175 619.4 433 69.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 6.1e-175 617.8 432 68.1
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 7.9e-175 617.5 425 71.3
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.0e-174 617.1 433 70.0
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.8e-174 616.3 433 69.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.8e-174 616.3 433 69.5
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 3.0e-174 615.5 433 69.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 3.0e-174 615.5 421 70.1
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 3.0e-174 615.5 421 70.1
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.1e-174 614.8 432 68.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 8.8e-174 614.0 430 69.8
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.7e-173 611.3 431 68.2
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 7.4e-173 610.9 425 69.4
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 9.7e-173 610.5 425 68.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 9.7e-173 610.5 422 68.5
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.2e-172 609.4 432 67.4
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 8.2e-172 607.4 434 68.4
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 8.2e-172 607.4 428 67.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 8.2e-172 607.4 432 67.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 8.2e-172 607.4 432 68.3
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.4e-171 606.7 547 58.5
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.8e-171 606.3 432 67.1
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.4e-171 605.9 432 68.3
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.3e-171 604.7 432 68.1
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.0e-170 602.8 424 67.9
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 2.0e-170 602.8 417 68.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.9e-170 601.3 420 67.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 5.9e-170 601.3 427 67.7
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.7e-170 600.9 455 65.3
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 7.7e-170 600.9 431 66.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 7.7e-170 600.9 427 66.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.3e-169 600.1 431 65.9
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.1e-168 597.0 434 67.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.6e-167 593.2 434 66.8
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-167 593.2 420 67.4
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-167 593.2 420 67.4
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 8.0e-167 590.9 419 68.0
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 6.7e-166 587.8 448 63.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.3e-164 583.6 420 67.4
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.3e-164 583.6 422 67.3
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 8.2e-164 580.9 420 67.1
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 3.1e-163 578.9 422 66.8
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.1e-163 577.4 422 66.6
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.3e-161 573.5 422 66.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.2e-161 572.8 422 66.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 3.8e-161 572.0 415 67.2
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 5.5e-160 568.2 425 64.0
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.2e-159 567.0 429 64.6
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 6.3e-156 554.7 433 64.4
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 5.3e-155 551.6 417 65.5
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 6.5e-153 544.7 427 59.0
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 8.8e-150 534.3 414 61.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.3e-148 530.4 422 60.0
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 3.6e-143 512.3 334 74.0
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.0e-142 510.8 299 82.6
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.5e-138 495.7 354 66.1
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.2e-135 487.3 420 55.2
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.6e-133 479.6 417 57.6
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 4.4e-133 478.8 431 55.5
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 7.3e-128 461.5 435 56.3
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 8.9e-126 454.5 434 50.7
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.6e-125 453.0 444 53.8
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 9.8e-125 451.1 388 55.4
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-123 447.6 353 64.6
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.9e-121 439.1 425 48.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 6.6e-121 438.3 281 73.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.1e-114 416.8 353 58.4
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.6e-112 408.7 275 70.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 2.1e-90 337.0 194 82.0
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.3e-84 317.8 421 41.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.1e-75 288.1 244 57.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 4.8e-71 272.7 259 54.8
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.9e-60 236.9 182 62.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 5.7e-48 196.1 136 69.9
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 4.9e-31 139.8 102 65.7
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.0e-29 134.4 103 64.1
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 5.9e-29 132.9 101 60.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.2e-21 108.6 88 60.2
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.1e-14 83.6 359 23.7
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 2.8e-10 70.9 91 45.1


User provided reference genes

Program Settings