Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025832 Chenopodium quinoa HOM05D002183 ORTHO05D002169 3.5e-77 291.6 151 100.0
AUR62029879 Chenopodium quinoa HOM05D002183 ORTHO05D002169 1.6e-37 159.8 91 87.9
AUR62038047 Chenopodium quinoa HOM05D002183 ORTHO05D002169 7.7e-32 141.0 216 43.5
AUR62014491 Chenopodium quinoa HOM05D002183 ORTHO05D002169 6.5e-31 137.9 98 73.5
EL10Ac1g00630 Beta vulgaris HOM05D002183 ORTHO05D002169 1.1e-25 120.6 100 66.0
Ah.05g176900 Amaranthus hybridus HOM05D002183 ORTHO05D002169 6.5e-23 111.3 100 61.0
Hund26902 Selenicereus undatus HOM05D002183 ORTHO05D002169 4.1e-17 92.0 88 51.1
Hund17180 Selenicereus undatus HOM05D002183 ORTHO05D002169 2.5e-14 82.8 105 48.6
CSS0012198 Camellia sinensis var. sinensis HOM05D002183 ORTHO05D002169 7.2e-14 81.3 100 50.0
CiPaw.08G060000 Carya illinoinensis HOM05D002183 ORTHO05D002169 8.0e-13 77.8 100 43.0
Cfa013865 Carpinus fangiana HOM05D002765 ORTHO05D003083 1.4e-12 77.0 100 45.0
Haze_22542 Corylus avellana HOM05D002183 ORTHO05D002169 3.0e-12 75.9 100 45.0
Atru.chr13.419 Acer truncatum HOM05D002183 ORTHO05D002169 1.2e-11 73.9 87 44.8
RcHm_v2.0_Chr6g0301571 Rosa chinensis HOM05D002183 ORTHO05D002169 1.5e-11 73.6 100 43.0
Dinv39450 Davidia involucrata HOM05D002183 ORTHO05D002169 2.0e-11 73.2 101 45.5
CSS0024303 Camellia sinensis var. sinensis HOM05D002183 ORTHO05D002169 3.3e-11 72.4 100 45.0
Cpa.g.sc99.33 Carica papaya HOM05D002183 ORTHO05D002169 3.3e-11 72.4 88 42.0
FAN15G1175 Fragaria x ananassa HOM05D002183 ORTHO05D002169 3.3e-11 72.4 88 43.2
FAN20G2224 Fragaria x ananassa HOM05D002183 ORTHO05D002169 3.3e-11 72.4 88 43.2
QL02p009441 Quercus lobata HOM05D002183 ORTHO05D002169 3.3e-11 72.4 89 43.8
GSVIVG01009760001 Vitis vinifera HOM05D002183 ORTHO05D002169 3.3e-11 72.4 88 42.0
Thecc.08G032300 Theobroma cacao HOM05D002183 ORTHO05D002169 5.7e-11 71.6 90 43.3
FAN27G3278 Fragaria x ananassa HOM05D000394 ORTHO05D000299 7.5e-11 71.2 88 43.2
Nn5g29694 Nelumbo nucifera HOM05D002183 ORTHO05D002169 9.7e-11 70.9 88 44.3
Ciclev10001796m.g Citrus clementina HOM05D002183 ORTHO05D002169 1.3e-10 70.5 101 42.6
COL.COLO4_26255 Corchorus olitorius HOM05D002183 ORTHO05D002169 2.8e-10 69.3 89 41.6
Duzib041G0698 Durio zibethinus HOM05D002183 ORTHO05D002169 2.8e-10 69.3 110 36.4
Sc15g0007100 Simmondsia chinensis HOM05D002183 ORTHO05D002169 2.8e-10 69.3 88 39.8
Lj4A789G52 Lonicera japonica HOM05D002183 ORTHO05D002169 4.8e-10 68.6 89 41.6
FvH4_2g39410 Fragaria vesca HOM05D002183 ORTHO05D002169 8.2e-10 67.8 88 40.9
DCAR_017526 Daucus carota HOM05D002183 ORTHO05D002169 1.1e-09 67.4 88 44.3
MBI16_g07879_MAGBIO Magnolia biondii HOM05D002183 ORTHO05D002169 1.1e-09 67.4 89 42.7
CiPaw.07G158000 Carya illinoinensis HOM05D002183 ORTHO05D002169 1.4e-09 67.0 100 39.0
Potri.002G032500 Populus trichocarpa HOM05D002183 ORTHO05D002169 1.8e-09 66.6 88 42.0
Sabra02G0026400 Salix brachista HOM05D002183 ORTHO05D002169 1.8e-09 66.6 100 41.0
Oeu052973.1 Olea europaea HOM05D002183 ORTHO05D002169 3.1e-09 65.9 88 43.2
Eucgr.F01596 Eucalyptus grandis HOM05D002183 ORTHO05D002169 4.1e-09 65.5 100 40.0
Gohir.A03G079700 Gossypium hirsutum HOM05D002183 ORTHO05D002169 4.1e-09 65.5 90 41.1
CANSAT25G2082 Cannabis sativa HOM05D002183 ORTHO05D002169 5.3e-09 65.1 101 39.6
PGR083G2726 Punica granatum HOM05D002183 ORTHO05D002169 7.0e-09 64.7 100 44.0
TAR628G0384 Trochodendron aralioides HOM05D002183 ORTHO05D002169 7.0e-09 64.7 88 40.9
Actinidia22519 Actinidia chinensis HOM05D002183 ORTHO05D002169 1.2e-08 63.9 89 40.4
Gohir.D02G095600 Gossypium hirsutum HOM05D002183 ORTHO05D002169 1.2e-08 63.9 90 40.0
Gorai.005G109300 Gossypium raimondii HOM05D002183 ORTHO05D002169 1.2e-08 63.9 90 40.0
Manes.18G020500 Manihot esculenta HOM05D002183 ORTHO05D002169 1.2e-08 63.9 89 38.2
Glyma.14G071700 Glycine max HOM05D002183 ORTHO05D002169 2.0e-08 63.2 90 42.2
Oeu002821.2 Olea europaea HOM05D002183 ORTHO05D002169 3.5e-08 62.4 88 38.6
Sabra05G0178100 Salix brachista HOM05D002183 ORTHO05D002169 3.5e-08 62.4 100 39.0
arahy.Tifrunner.gnm1.ann1.QE05K9 Arachis hypogaea HOM05D002183 ORTHO05D002169 4.5e-08 62.0 90 42.2
Manes.05G155800 Manihot esculenta HOM05D002183 ORTHO05D002169 5.9e-08 61.6 88 35.2
arahy.Tifrunner.gnm1.ann1.FN6QZN Arachis hypogaea HOM05D002183 ORTHO05D002169 7.7e-08 61.2 90 42.2
Carub.0001s1920 Capsella rubella HOM05D002183 ORTHO05D002169 7.7e-08 61.2 89 38.2
Duzib116G0119 Durio zibethinus HOM05D002183 ORTHO05D002169 7.7e-08 61.2 89 40.4
HPP92_003103 Vanilla planifolia HOM05D002183 ORTHO05D002169 1.0e-07 60.8 92 41.3
arahy.Tifrunner.gnm1.ann1.96L2JF Arachis hypogaea HOM05D000367 ORTHO05D016551 1.3e-07 60.5 91 41.8
vmacro21676 Vaccinium macrocarpon HOM05D002183 ORTHO05D002169 1.3e-07 60.5 100 39.0
Lj1g0001454 Lotus japonicus HOM05D002183 ORTHO05D002169 1.7e-07 60.1 76 40.8
AT1G19660 Arabidopsis thaliana HOM05D002183 ORTHO05D002169 2.9e-07 59.3 89 36.0
Nn1g04893 Nelumbo nucifera HOM05D002183 ORTHO05D002169 2.9e-07 59.3 88 43.2
Lalb_Chr22g0354611 Lupinus albus HOM05D002183 ORTHO05D002169 5.0e-07 58.5 100 39.0
Rhsim07G0241700 Rhododendron simsii HOM05D002183 ORTHO05D002169 6.5e-07 58.2 99 38.4
RhsimUnG0236600 Rhododendron simsii HOM05D002183 ORTHO05D002169 6.5e-07 58.2 99 38.4
Solyc04g080700.4 Solanum lycopersicum HOM05D002183 ORTHO05D002169 6.5e-07 58.2 88 38.6
arahy.Tifrunner.gnm1.ann1.JKN2LU Arachis hypogaea HOM05D000367 ORTHO05D002169 1.1e-06 57.4 134 32.8
CAN.G710.10 Capsicum annuum HOM05D002183 ORTHO05D002169 1.1e-06 57.4 88 37.5
PSO675G1183 Papaver somniferum HOM05D002183 ORTHO05D002169 1.1e-06 57.4 90 35.6
SalBow7G3426 Salvia bowleyana HOM05D002183 ORTHO05D002169 1.1e-06 57.4 88 38.6
TPR.G12441 Trifolium pratense HOM05D002183 ORTHO05D002169 1.1e-06 57.4 90 38.9
TWI12G1188 Tripterygium wilfordii HOM05D002183 ORTHO05D002169 1.1e-06 57.4 89 37.1
Sopen04g034290 Solanum pennellii HOM05D002183 ORTHO05D002169 1.5e-06 57.0 88 36.4
PGSC0003DMG402003745 Solanum tuberosum HOM05D002183 ORTHO05D002169 1.5e-06 57.0 88 36.4
TAR625G0195 Trochodendron aralioides HOM05D002183 ORTHO05D002169 1.5e-06 57.0 88 36.4
Aa31LG7G4260 Aethionema arabicum HOM05D000394 ORTHO05D000299 1.9e-06 56.6 84 39.3
Gohir.D06G003700 Gossypium hirsutum HOM05D002183 ORTHO05D002169 1.9e-06 56.6 91 39.6
Gorai.010G008300 Gossypium raimondii HOM05D002183 ORTHO05D002169 1.9e-06 56.6 91 39.6
Nitab4.5_0015312g0010 Nicotiana tabacum HOM05D002183 ORTHO05D002169 3.2e-06 55.8 77 42.9
Dinv36114 Davidia involucrata HOM05D002183 ORTHO05D002169 4.2e-06 55.5 100 35.0
Gohir.A06G008000 Gossypium hirsutum HOM05D002183 ORTHO05D002169 4.2e-06 55.5 91 38.5
Nitab4.5_0001091g0010 Nicotiana tabacum HOM05D002183 ORTHO05D002169 4.2e-06 55.5 77 41.6
MELO3C003799.2 Cucumis melo HOM05D002183 ORTHO05D002169 5.5e-06 55.1 100 34.0
Thhalv10018837m.g Eutrema salsugineum HOM05D002183 ORTHO05D002169 5.5e-06 55.1 92 41.3
Oeu047765.2 Olea europaea HOM05D002183 ORTHO05D002169 5.5e-06 55.1 88 38.6
Peaxi162Scf00064g00535 Petunia axillaris HOM05D002183 ORTHO05D002169 5.5e-06 55.1 88 38.6
Sp1g17500 Schrenkiella parvula HOM05D002183 ORTHO05D002169 5.5e-06 55.1 87 39.1
TWI56G1271 Tripterygium wilfordii HOM05D002183 ORTHO05D002169 5.5e-06 55.1 80 42.5
CAN.G847.4 Capsicum annuum HOM05D002183 ORTHO05D002169 7.2e-06 54.7 76 42.1
Lalb_Chr08g0245941 Lupinus albus HOM05D002183 ORTHO05D002169 7.2e-06 54.7 92 34.8
PSO541G0160 Papaver somniferum HOM05D002183 ORTHO05D002169 7.2e-06 54.7 90 35.6
Phvul.001G012000 Phaseolus vulgaris HOM05D002183 ORTHO05D002169 7.2e-06 54.7 89 39.3
unitig_8.g4929 Utricularia gibba HOM05D002183 ORTHO05D002169 7.2e-06 54.7 88 38.6


User provided reference genes

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