Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.6e-103 379.4 189 100.0
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 3.7e-100 368.2 188 97.3
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.9e-89 332.0 189 86.8
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 5.0e-89 331.3 189 86.2
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 1.7e-84 316.2 186 84.4
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 3.8e-73 278.5 186 76.3
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 5.0e-73 278.1 194 75.8
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-73 278.1 194 75.8
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-73 278.1 194 75.8
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 1.5e-72 276.6 179 79.3
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.3e-72 275.4 194 74.7
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.3e-72 275.4 194 74.7
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 3.3e-72 275.4 183 77.0
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 9.5e-72 273.9 185 77.8
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 1.2e-71 273.5 186 76.3
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.1e-71 272.7 186 76.3
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 4.7e-71 271.6 189 75.1
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 6.1e-71 271.2 186 76.9
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 6.1e-71 271.2 189 74.1
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 8.0e-71 270.8 181 76.8
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 8.0e-71 270.8 186 75.8
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 4.0e-70 268.5 189 73.0
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 8.9e-70 267.3 181 74.6
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.9e-70 267.3 191 69.6
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.9e-70 267.3 188 70.7
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 8.9e-70 267.3 188 70.7
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 8.9e-70 267.3 186 74.2
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 2.0e-69 266.2 174 78.2
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 3.4e-69 265.4 173 76.3
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 4.4e-69 265.0 183 74.3
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 4.4e-69 265.0 184 75.0
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 7.5e-69 264.2 191 70.7
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 1.3e-68 263.5 189 72.5
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.9e-68 262.3 192 71.4
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 3.7e-68 261.9 188 70.7
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 4.9e-68 261.5 188 72.3
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 8.3e-68 260.8 179 76.0
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 8.3e-68 260.8 190 70.0
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 2.4e-67 259.2 188 71.3
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 7.0e-67 257.7 191 71.7
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 9.2e-67 257.3 188 72.9
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 9.2e-67 257.3 174 74.7
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.6e-66 256.5 185 71.4
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 2.7e-66 255.8 174 74.7
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 3.5e-66 255.4 173 72.8
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 7.8e-66 254.2 188 68.1
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.0e-65 253.8 188 70.7
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.3e-65 253.4 181 72.9
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.7e-65 253.1 182 71.4
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 2.3e-65 252.7 184 70.7
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 2.3e-65 252.7 175 74.9
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 3.0e-65 252.3 175 73.1
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 3.9e-65 251.9 190 71.1
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 5.0e-65 251.5 184 70.1
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 6.6e-65 251.1 190 70.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 6.6e-65 251.1 188 68.6
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 8.6e-65 250.8 193 69.9
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.6e-65 250.8 183 68.9
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 2.5e-64 249.2 188 67.0
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.3e-64 248.8 173 72.8
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 5.6e-64 248.1 171 73.7
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 5.6e-64 248.1 188 67.0
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 5.6e-64 248.1 187 70.6
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 9.5e-64 247.3 173 69.4
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.6e-63 246.5 189 69.3
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 3.6e-63 245.4 186 69.4
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 4.7e-63 245.0 186 67.7
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 4.7e-63 245.0 188 69.7
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 6.2e-63 244.6 181 71.8
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 6.2e-63 244.6 174 70.7
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 1.1e-62 243.8 172 67.4
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 1.4e-62 243.4 175 70.3
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.8e-62 243.0 190 65.3
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 4.0e-62 241.9 189 65.6
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.2e-62 241.5 191 66.5
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.2e-61 240.4 172 68.6
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 2.0e-61 239.6 162 75.9
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.0e-61 239.6 188 64.4
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 3.4e-61 238.8 185 65.9
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.7e-60 236.5 177 68.4
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 1.7e-60 236.5 180 67.8
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 2.9e-60 235.7 180 66.7
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 2.9e-60 235.7 170 70.6
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 4.9e-60 235.0 177 68.9
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 4.9e-60 235.0 180 67.8
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 4.9e-60 235.0 180 67.8
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 6.4e-60 234.6 180 68.3
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 6.4e-60 234.6 189 63.0
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 8.3e-60 234.2 193 64.8
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 1.1e-59 233.8 190 65.8
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.4e-59 233.4 186 65.6
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.9e-59 233.0 167 71.9
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 2.4e-59 232.6 124 87.1
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 3.2e-59 232.3 124 86.3
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 5.4e-59 231.5 182 66.5
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 5.4e-59 231.5 179 67.6
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 7.0e-59 231.1 170 64.7
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 9.2e-59 230.7 177 67.8
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.2e-58 230.3 191 64.4
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 3.5e-58 228.8 198 62.6
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 3.5e-58 228.8 198 62.6
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.0e-58 228.0 202 62.4
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.0e-58 228.0 202 62.4
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 7.8e-58 227.6 182 65.4
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.0e-57 227.3 169 69.2
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.7e-57 226.5 189 63.5
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 3.0e-57 225.7 171 64.3
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 3.9e-57 225.3 173 66.5
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 1.5e-56 223.4 175 62.9
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 5.8e-53 211.5 173 64.7
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.3e-52 210.3 170 61.2
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 1.7e-52 209.9 120 81.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.4e-51 206.8 173 61.3
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.4e-51 206.1 137 72.3
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.3e-41 173.7 189 54.0
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.0e-41 172.6 118 68.6
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.5e-40 170.2 220 47.3
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.2e-36 156.4 183 51.9
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 9.3e-35 151.0 192 44.3
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 2.7e-34 149.4 167 45.5
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 2.7e-34 149.4 170 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 3.1e-30 136.0 117 56.4
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 5.4e-27 125.2 131 45.8
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 9.9e-21 104.4 92 53.3
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 5.6e-16 88.6 219 30.1
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 1.8e-14 83.6 141 33.3
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.3e-09 67.4 193 33.2


User provided reference genes

Program Settings