Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025566 Chenopodium quinoa HOM05D008448 ORTHO05D009883 0.0e+00 1239.9 692 100.0
AUR62017232 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.8e-74 282.3 601 31.6
AUR62035512 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.1e-72 275.8 659 30.5
AUR62025563 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.5e-66 256.1 601 30.4
AUR62021183 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.5e-63 247.3 601 29.8
AUR62042664 Chenopodium quinoa HOM05D008448 ORTHO05D009883 5.0e-62 243.4 351 39.3
AUR62033810 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.5e-61 239.2 323 41.5
AUR62018712 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.6e-60 238.4 603 29.5
AUR62041020 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.8e-59 233.0 328 37.8
AUR62027995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.2e-58 232.3 588 29.8
AUR62042631 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.4e-58 230.3 548 27.4
AUR62041835 Chenopodium quinoa HOM05D008448 ORTHO05D009883 8.3e-57 226.1 273 42.9
AUR62039782 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.8e-51 208.4 322 37.3
AUR62041092 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.0e-51 207.2 575 28.0
EL10Ac6g14284 Beta vulgaris HOM05D001399 ORTHO05D009883 2.0e-50 204.9 387 33.6
AUR62033784 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.7e-44 183.7 342 35.4
EL10Ac1g01700 Beta vulgaris HOM05D008320 ORTHO05D009883 9.9e-42 176.0 338 31.4
AUR62030606 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.7e-41 175.3 249 37.8
AUR62019474 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.9e-41 174.5 242 38.4
AUR62022342 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.1e-39 168.3 207 45.4
EL10As14g24081 Beta vulgaris HOM05D008320 ORTHO05D009883 4.6e-39 167.2 415 30.1
AUR62014831 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.9e-37 161.8 240 41.2
AUR62038404 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.9e-37 161.8 257 36.6
AUR62035592 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.2e-36 156.8 322 32.6
AUR62017405 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.8e-34 150.2 299 32.1
Ah.01g016470 Amaranthus hybridus HOM05D008448 ORTHO05D009883 7.8e-31 139.8 205 40.5
Ah.01g016300 Amaranthus hybridus HOM05D008448 ORTHO05D009883 3.9e-30 137.5 205 40.0
AUR62038967 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.8e-28 131.3 354 30.2
AUR62044200 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.2e-28 130.2 250 34.4
AUR62034042 Chenopodium quinoa HOM05D008320 ORTHO05D009883 6.4e-25 120.2 150 40.7
AUR62037987 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.7e-23 114.8 347 28.8
AUR62039152 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.9e-22 110.9 255 32.5
AUR62031995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.6e-20 104.4 274 28.5
AUR62026691 Chenopodium quinoa HOM05D008448 ORTHO05D009883 8.1e-20 103.2 92 44.6
AUR62042466 Chenopodium quinoa HOM05D008320 ORTHO05D012961 1.5e-18 99.0 223 34.1
AUR62015292 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.6e-18 98.2 189 36.0
AUR62031194 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.5e-18 97.4 106 49.1
AUR62020436 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.8e-18 97.1 253 31.2
AUR62034984 Chenopodium quinoa HOM05D012707 ORTHO05D013844 7.6e-18 96.7 94 43.6
AUR62015374 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.7e-17 95.5 304 27.3
AUR62042854 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.4e-16 91.7 253 29.6
AUR62019630 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.2e-16 91.3 304 27.6
AUR62035284 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-16 91.3 347 24.5
AUR62037613 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-16 91.3 195 33.3
AUR62044104 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-16 91.3 263 28.9
AUR62031296 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.1e-16 90.1 356 24.2
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.2e-15 89.4 272 27.6
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.6e-15 89.0 275 27.6
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.1e-15 88.6 353 26.9
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 2.1e-15 88.6 226 28.3
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.5e-15 87.8 275 28.0
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.5e-15 87.8 272 28.3
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 3.5e-15 87.8 275 28.4
AUR62025888 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.6e-15 87.4 506 21.1
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 6.0e-15 87.0 226 28.3
AUR62028398 Chenopodium quinoa HOM05D028432 ORTHO05D009883 5.1e-14 84.0 217 27.6
AUR62035363 Chenopodium quinoa HOM05D008448 ORTHO05D009883 5.1e-14 84.0 100 43.0
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 4.3e-13 80.9 260 25.8
AUR62038601 Chenopodium quinoa HOM05D008320 ORTHO05D009883 9.6e-13 79.7 220 27.3
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.6e-12 79.0 287 26.1
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 1.6e-12 79.0 260 25.8
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 2.8e-12 78.2 260 25.4
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.8e-12 78.2 285 27.7
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 2.8e-12 78.2 260 25.4
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 2.8e-12 78.2 260 25.4
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.8e-12 77.4 265 28.7
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.8e-12 77.4 265 29.1
AUR62041270 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.8e-12 77.4 339 26.0
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 4.8e-12 77.4 280 25.7
AUR62009195 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.2e-12 77.0 265 28.3
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 6.2e-12 77.0 260 25.0
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 6.2e-12 77.0 260 25.0
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.1e-12 76.6 265 28.7
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.1e-12 76.6 265 28.3
AUR62028448 Chenopodium quinoa HOM05D008320 ORTHO05D009883 8.1e-12 76.6 244 27.9
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.1e-12 76.6 265 28.7
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 8.1e-12 76.6 288 24.3
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-11 76.3 265 27.9
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.1e-11 76.3 224 26.3
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.4e-11 75.9 273 25.6
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-11 75.9 265 28.3
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-11 75.9 265 28.3
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-11 75.9 261 29.1
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 1.4e-11 75.9 287 23.3
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 1.4e-11 75.9 265 26.4
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-11 75.5 265 28.7
AUR62038800 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.4e-11 75.1 265 28.3
AUR62042381 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.4e-11 75.1 323 24.1
Os01g0152500 Oryza sativa ssp. japonica HOM05D008448 ORTHO05D009883 3.1e-11 74.7 227 26.4
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 3.1e-11 74.7 257 24.1
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 4.0e-11 74.3 274 25.5
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.3e-11 73.9 284 24.6
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 6.9e-11 73.6 273 24.9
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 9.0e-11 73.2 257 24.1
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 9.0e-11 73.2 269 25.7
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.0e-11 73.2 265 28.3
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 9.0e-11 73.2 226 26.5
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 1.2e-10 72.8 275 26.5
AUR62029387 Chenopodium quinoa HOM05D000636 ORTHO05D002338 1.2e-10 72.8 112 48.2
AUR62040345 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.2e-10 72.8 54 63.0
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-10 72.4 265 28.3
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 1.5e-10 72.4 277 26.7
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-10 72.0 265 28.7
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.6e-10 71.6 263 26.6
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 2.6e-10 71.6 277 26.4
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 2.6e-10 71.6 257 23.7
AUR62003872 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.4e-10 71.2 266 27.8
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 3.4e-10 71.2 277 26.7
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 4.5e-10 70.9 289 24.2
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 5.8e-10 70.5 307 24.8
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 7.6e-10 70.1 263 24.7
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 9.9e-10 69.7 277 26.7
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 9.9e-10 69.7 280 24.6
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 9.9e-10 69.7 229 27.5
AUR62015725 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.3e-09 69.3 109 40.4
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 1.3e-09 69.3 273 24.9
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.3e-09 69.3 243 23.9
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.3e-09 69.3 220 25.9
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 1.7e-09 68.9 273 23.8
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 2.2e-09 68.6 232 25.4
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 2.9e-09 68.2 283 24.4
AUR62021179 Chenopodium quinoa HOM05D000170 ORTHO05D000159 3.8e-09 67.8 78 43.6
AUR62043719 Chenopodium quinoa HOM05D008320 ORTHO05D012961 3.8e-09 67.8 232 28.9
AUR62044323 Chenopodium quinoa HOM05D000170 ORTHO05D000159 3.8e-09 67.8 78 43.6
AUR62044548 Chenopodium quinoa HOM05D000170 ORTHO05D000159 3.8e-09 67.8 78 43.6
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 3.8e-09 67.8 273 21.2
SGA_v2.0_scaffold131G34381 Striga asiatica HOM05D002461 ORTHO05D002997 6.4e-09 67.0 273 23.4
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 6.4e-09 67.0 268 25.7
arahy.Tifrunner.gnm1.ann1.BZ4NKF Arachis hypogaea HOM05D008486 ORTHO05D010657 8.4e-09 66.6 128 29.7
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.4e-09 66.6 259 25.9
Os02g0517900 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D000898 1.1e-08 66.2 223 23.3
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 1.1e-08 66.2 218 25.7
AUR62021600 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.4e-08 65.9 103 37.9
AUR62042136 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.4e-08 65.9 239 26.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 1.4e-08 65.9 268 25.4
Os11g0307600 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D009883 1.9e-08 65.5 230 25.2
arahy.Tifrunner.gnm1.ann1.4R5PNE Arachis hypogaea HOM05D008486 ORTHO05D010657 2.4e-08 65.1 128 29.7
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.2e-08 64.7 259 25.9
Lsat_1_v5_gn_1_64161 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-08 64.3 240 24.2
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 4.2e-08 64.3 340 21.2
Ah.15g098050 Amaranthus hybridus HOM05D008448 ORTHO05D009883 5.5e-08 63.9 150 35.3
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 5.5e-08 63.9 274 22.3
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 5.5e-08 63.9 258 23.6
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 7.1e-08 63.5 122 30.3
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 7.1e-08 63.5 229 23.6
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 1.6e-07 62.4 97 33.0
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 1.6e-07 62.4 97 33.0
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.6e-07 62.4 194 25.8
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.6e-07 62.4 240 21.7
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 2.1e-07 62.0 288 22.9
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-07 62.0 97 33.0
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-07 62.0 97 33.0
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 2.1e-07 62.0 270 24.1
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 2.1e-07 62.0 270 24.1
AUR62034935 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.5e-07 61.2 235 22.6
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 3.5e-07 61.2 234 24.4
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 3.5e-07 61.2 234 24.4
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.5e-07 61.2 217 26.3
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 4.6e-07 60.8 230 25.7
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.0e-07 60.5 243 22.6
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 6.0e-07 60.5 270 23.7
AUR62037066 Chenopodium quinoa HOM05D008448 ORTHO05D138146 7.9e-07 60.1 62 38.7
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 7.9e-07 60.1 48 54.2
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 7.9e-07 60.1 270 23.7
ECA240G0352 Erigeron canadensis HOM05D021710 ORTHO05D002997 1.0e-06 59.7 244 20.9
AUR62030713 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-06 59.3 197 27.9
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 1.3e-06 59.3 234 23.9
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 1.3e-06 59.3 234 23.9
arahy.Tifrunner.gnm1.ann1.PTJ2V9 Arachis hypogaea HOM05D008486 ORTHO05D010657 1.8e-06 58.9 120 26.7
AUR62014786 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-06 58.9 265 26.0
AUR62037746 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-06 58.9 198 29.3
AUR62042613 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-06 58.9 199 30.2
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.8e-06 58.9 270 23.7
AUR62041720 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-06 58.5 266 27.1
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.3e-06 58.5 147 29.3
AUR62038917 Chenopodium quinoa HOM05D000043 ORTHO05D044059 3.0e-06 58.2 74 45.9
Dinv00626 Davidia involucrata HOM05D007544 ORTHO05D009682 3.0e-06 58.2 97 32.0
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.9e-06 57.8 238 24.4
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 3.9e-06 57.8 240 22.9
AUR62037064 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.1e-06 57.4 84 38.1


User provided reference genes

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