Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.0e-38 161.0 84 100.0
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.6e-37 158.3 84 97.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 5.9e-34 147.1 84 89.3
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.2e-31 139.4 83 83.1
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 3.6e-31 137.9 83 81.9
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 4.7e-31 137.5 83 81.9
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 8.0e-31 136.7 83 81.9
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 8.0e-31 136.7 83 81.9
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.4e-30 136.0 83 79.5
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.3e-30 135.2 83 84.3
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 6.8e-30 133.7 83 79.5
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 2.0e-29 132.1 83 77.1
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 2.0e-29 132.1 83 81.9
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.6e-29 131.7 82 81.7
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 3.4e-29 131.3 83 78.3
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 4.4e-29 131.0 83 79.5
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 9.8e-29 129.8 83 75.9
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.7e-28 129.0 83 75.9
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.2e-28 128.6 83 75.9
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 2.9e-28 128.3 83 74.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.9e-28 127.5 76 81.6
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 4.9e-28 127.5 83 77.1
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 6.4e-28 127.1 83 74.7
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 6.4e-28 127.1 82 80.5
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.4e-27 125.9 82 78.0
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.4e-27 125.9 82 75.6
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.9e-27 125.6 83 80.7
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.9e-27 125.6 83 78.3
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.9e-27 125.6 83 78.3
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.4e-27 125.2 83 74.7
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.4e-27 125.2 83 78.3
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 2.4e-27 125.2 83 75.9
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.4e-27 124.0 83 79.5
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 9.2e-27 123.2 83 79.5
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.2e-26 122.9 82 76.8
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.6e-26 122.5 83 77.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 1.6e-26 122.5 82 75.6
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.0e-26 122.1 82 75.6
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 2.0e-26 122.1 83 72.3
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 2.0e-26 122.1 82 75.6
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 2.7e-26 121.7 82 76.8
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 3.5e-26 121.3 83 77.1
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.6e-26 120.9 83 71.1
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 4.6e-26 120.9 82 76.8
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 6.0e-26 120.6 82 72.0
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 7.8e-26 120.2 83 69.9
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 1.0e-25 119.8 82 70.7
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.3e-25 119.4 82 75.6
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.7e-25 119.0 82 74.4
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.7e-25 119.0 82 75.6
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.7e-25 119.0 82 75.6
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.7e-25 119.0 82 75.6
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-25 118.6 82 72.0
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 3.0e-25 118.2 82 74.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 5.0e-25 117.5 82 70.7
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 5.0e-25 117.5 82 73.2
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 6.6e-25 117.1 78 75.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 6.6e-25 117.1 78 75.6
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 6.6e-25 117.1 102 62.7
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 6.6e-25 117.1 82 69.5
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.1e-24 116.3 83 67.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.1e-24 116.3 85 72.9
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.1e-24 116.3 82 75.6
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 1.5e-24 115.9 82 74.4
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.5e-24 115.2 82 70.7
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 4.3e-24 114.4 83 68.7
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 4.3e-24 114.4 83 68.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 7.3e-24 113.6 80 71.2
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 7.3e-24 113.6 82 68.3
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 7.3e-24 113.6 82 68.3
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 1.2e-23 112.8 82 69.5
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.6e-23 112.5 83 71.1
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 2.1e-23 112.1 83 68.7
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 2.8e-23 111.7 83 69.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 3.6e-23 111.3 83 73.5
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.7e-23 110.9 83 73.5
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 4.7e-23 110.9 83 73.5
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 4.7e-23 110.9 82 67.1
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 8.1e-23 110.2 82 70.7
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 1.1e-22 109.8 83 72.3
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.4e-22 109.4 60 88.3
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.8e-22 109.0 83 72.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 3.1e-22 108.2 83 68.7
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 4.0e-22 107.8 82 70.7
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 6.8e-22 107.1 71 76.1
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.5e-21 105.9 82 64.6
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 4.4e-21 104.4 76 68.4
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.7e-20 102.4 73 64.4
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.2e-20 102.1 83 63.9
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.2e-20 102.1 83 63.9
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.2e-20 102.1 83 63.9
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.2e-20 102.1 83 63.9
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 2.2e-20 102.1 83 62.7
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 4.9e-20 100.9 83 63.9
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.3e-20 100.1 82 62.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 1.1e-19 99.8 60 81.7
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.1e-19 99.8 83 60.2
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.4e-19 99.4 83 61.4
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.4e-19 99.4 82 64.6
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.9e-19 99.0 82 62.2
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 2.4e-19 98.6 83 60.2
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 3.2e-19 98.2 83 60.2
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 3.2e-19 98.2 83 60.2
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 3.2e-19 98.2 62 79.0
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 9.2e-19 96.7 83 59.0
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 9.2e-19 96.7 59 83.1
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.2e-18 96.3 83 59.0
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 2.1e-18 95.5 73 61.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.0e-17 93.2 72 62.5
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.0e-17 91.7 60 78.3
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 3.0e-17 91.7 60 71.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 3.0e-17 91.7 104 50.0
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.1e-16 89.7 72 56.9
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.5e-16 89.4 93 52.7
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.9e-16 89.0 111 48.6
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 2.5e-16 88.6 57 73.7
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 4.3e-16 87.8 76 55.3
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 7.3e-16 87.0 93 51.6
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 7.3e-16 87.0 71 66.2
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.1e-15 85.5 75 62.7
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 3.6e-15 84.7 68 60.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.4e-14 82.8 64 64.1
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.5e-13 79.3 70 55.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 9.2e-11 70.1 37 89.2
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 2.1e-10 68.9 72 44.4
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 4.6e-10 67.8 75 53.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.7e-09 65.9 37 83.8
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 8.7e-09 63.5 37 81.1
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 1.5e-08 62.8 37 81.1
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.8e-06 55.8 34 76.5


User provided reference genes

Program Settings