Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.5e-106 387.9 189 100.0
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.0e-102 376.7 189 97.4
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 8.3e-84 313.9 185 80.0
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.0e-83 310.8 185 78.9
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.0e-78 297.0 188 73.9
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 2.5e-72 275.8 189 68.3
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.8e-70 269.6 189 66.1
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.4e-69 265.4 186 65.6
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 5.8e-69 264.6 188 63.8
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.5e-69 264.2 189 65.6
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.5e-69 264.2 189 65.6
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.2e-68 262.7 189 64.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.9e-68 262.3 189 65.1
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 6.4e-68 261.2 182 65.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 8.3e-68 260.8 184 64.1
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-67 260.4 186 64.0
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.4e-67 259.2 189 63.5
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.4e-67 259.2 186 63.4
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-66 256.9 187 63.6
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.6e-66 256.5 187 63.6
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.6e-66 256.5 185 63.8
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 2.0e-66 256.1 190 63.7
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 4.6e-66 255.0 186 62.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.0e-65 253.8 181 64.6
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.7e-65 253.1 186 64.0
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.3e-65 252.7 186 64.0
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 3.0e-65 252.3 184 61.4
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 3.0e-65 252.3 189 62.4
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 3.0e-65 252.3 189 64.0
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 3.0e-65 252.3 184 60.9
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 3.9e-65 251.9 189 60.8
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 5.0e-65 251.5 190 61.1
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 5.0e-65 251.5 185 63.8
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 6.6e-65 251.1 190 62.6
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 6.6e-65 251.1 186 63.4
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 8.6e-65 250.8 190 62.6
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.5e-64 250.0 186 62.9
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.5e-64 250.0 186 61.3
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.5e-64 249.2 183 63.9
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.3e-64 248.8 186 62.4
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 3.3e-64 248.8 189 61.4
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 7.3e-64 247.7 186 59.7
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 7.3e-64 247.7 186 59.7
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 9.5e-64 247.3 191 61.3
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.6e-63 246.5 189 61.9
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.6e-63 246.5 186 62.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.6e-63 246.5 188 61.2
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.6e-63 246.5 186 60.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.1e-63 246.1 187 62.0
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 2.8e-63 245.7 188 63.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.8e-63 245.7 186 59.1
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.8e-63 245.7 186 59.1
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.8e-63 245.7 189 59.8
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 4.7e-63 245.0 186 60.8
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 4.7e-63 245.0 186 61.8
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 4.7e-63 245.0 186 64.0
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 6.2e-63 244.6 185 62.7
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 6.2e-63 244.6 186 61.8
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 6.2e-63 244.6 186 62.9
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 8.0e-63 244.2 188 62.8
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 8.0e-63 244.2 182 62.1
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 8.0e-63 244.2 186 62.9
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.4e-62 243.4 183 63.4
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.4e-62 243.4 189 59.3
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.3e-62 242.7 189 60.8
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 2.3e-62 242.7 190 61.1
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 3.1e-62 242.3 186 60.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 3.1e-62 242.3 185 59.5
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.1e-62 242.3 185 59.5
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 4.0e-62 241.9 182 62.1
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 5.2e-62 241.5 190 60.0
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 6.8e-62 241.1 186 59.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 6.8e-62 241.1 188 63.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 8.9e-62 240.7 186 59.1
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 8.9e-62 240.7 183 61.7
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.5e-61 240.0 186 59.7
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.5e-61 240.0 186 60.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 2.6e-61 239.2 186 58.6
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.6e-61 239.2 188 60.1
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 7.5e-61 237.7 186 58.1
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 7.5e-61 237.7 186 58.1
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 7.5e-61 237.7 186 57.5
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 7.5e-61 237.7 187 58.8
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.7e-60 236.5 217 54.4
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 2.9e-60 235.7 187 58.3
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.9e-60 235.7 186 57.0
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 2.9e-60 235.7 188 58.0
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.9e-60 235.7 188 61.7
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 6.4e-60 234.6 205 56.1
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 9.2e-59 230.7 187 57.8
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 9.2e-59 230.7 188 56.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.1e-58 229.6 188 58.0
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.7e-58 229.2 181 59.1
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 6.0e-58 228.0 190 58.4
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 5.1e-57 224.9 226 49.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.1e-56 223.8 186 56.5
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 4.3e-56 221.9 190 55.3
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 9.5e-56 220.7 188 57.4
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.2e-55 220.3 183 54.6
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.8e-55 219.2 189 55.0
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.4e-54 216.9 148 64.9
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.0e-54 215.3 189 56.6
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 8.9e-54 214.2 188 55.3
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.4e-53 212.2 189 55.6
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.3e-52 210.3 185 51.9
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 2.9e-52 209.1 176 58.0
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 3.7e-52 208.8 185 54.1
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.9e-51 206.5 185 54.1
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.9e-51 206.5 188 52.7
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.4e-51 206.1 188 52.7
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.4e-51 204.9 179 57.5
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.2e-50 203.8 189 52.4
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 2.1e-47 193.0 185 49.2
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.8e-47 192.6 189 50.3
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 2.4e-46 189.5 146 58.2
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.4e-43 180.3 185 45.9
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.1e-42 176.4 109 79.8
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.6e-42 175.3 189 48.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.3e-41 173.7 135 56.3
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 5.1e-41 171.8 187 45.5
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 9.3e-27 124.4 82 69.5
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.1e-26 123.2 111 52.3
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-26 123.2 83 65.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 9.0e-22 107.8 101 54.5
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.7e-20 103.6 120 48.3
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.0e-14 82.4 96 47.9
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 6.7e-09 65.1 78 43.6
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 1.6e-07 60.5 178 27.0


User provided reference genes

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