Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 9.2e-168 593.6 322 100.0
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 2.6e-69 266.5 291 61.2
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 5.7e-69 265.4 292 62.0
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.7e-63 245.7 244 68.9
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 1.2e-61 241.1 292 50.0
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 2.2e-60 236.9 270 49.6
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.3e-57 227.6 271 49.1
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.2e-55 218.8 281 47.7
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 1.4e-54 217.6 276 48.2
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.8e-54 217.2 275 47.6
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 5.2e-54 215.7 273 46.9
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 8.9e-54 214.9 271 54.2
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 8.9e-54 214.9 290 45.5
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.5e-53 214.2 277 53.4
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 4.4e-53 212.6 260 48.8
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.7e-52 210.7 276 45.7
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 2.9e-52 209.9 271 47.6
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 8.3e-52 208.4 281 47.0
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 8.3e-52 208.4 281 47.0
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.9e-51 207.2 270 48.1
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.9e-51 207.2 180 61.1
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.9e-51 207.2 180 61.1
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 2.4e-51 206.8 273 47.3
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.2e-51 206.5 293 44.7
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 3.2e-51 206.5 266 47.0
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 9.2e-51 204.9 273 49.1
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 1.2e-50 204.5 267 53.9
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.6e-50 204.1 273 45.4
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 2.1e-50 203.8 275 53.5
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 2.7e-50 203.4 262 45.8
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 3.5e-50 203.0 269 45.7
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 4.6e-50 202.6 299 43.5
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 4.6e-50 202.6 270 54.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.0e-49 201.4 270 53.7
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.0e-49 201.4 268 46.3
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.3e-49 201.1 268 53.7
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.7e-49 200.7 270 50.7
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 1.7e-49 200.7 273 53.1
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 2.3e-49 200.3 302 47.0
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.0e-49 199.9 253 48.6
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 3.0e-49 199.9 285 43.2
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 5.1e-49 199.1 271 44.3
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 8.6e-49 198.4 295 40.7
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.1e-48 198.0 302 41.7
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.9e-48 197.2 260 51.9
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 4.3e-48 196.1 251 50.2
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 7.3e-48 195.3 267 45.7
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.2e-47 194.5 272 51.5
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 2.8e-47 193.4 272 46.3
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 3.6e-47 193.0 272 43.8
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 3.6e-47 193.0 297 41.1
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 3.6e-47 193.0 255 53.3
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 3.6e-47 193.0 263 44.5
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 4.7e-47 192.6 272 51.1
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 4.7e-47 192.6 281 43.8
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 4.7e-47 192.6 274 43.8
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.4e-46 191.0 276 45.3
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.3e-46 190.3 299 43.1
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 3.1e-46 189.9 258 45.3
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 5.2e-46 189.1 264 45.1
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.8e-46 188.7 267 44.2
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 8.9e-46 188.3 270 48.9
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 8.9e-46 188.3 299 46.2
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 8.9e-46 188.3 265 44.2
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 8.9e-46 188.3 275 44.0
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.2e-45 188.0 300 46.3
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 1.5e-45 187.6 257 49.8
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 2.0e-45 187.2 309 40.8
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 2.6e-45 186.8 249 45.8
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 2.6e-45 186.8 255 45.5
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 4.4e-45 186.0 177 54.2
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 4.4e-45 186.0 304 40.5
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 5.8e-45 185.7 256 43.8
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 5.8e-45 185.7 251 45.0
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.3e-44 184.5 249 45.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 2.2e-44 183.7 260 43.8
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.9e-44 183.3 286 41.6
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 6.4e-44 182.2 257 43.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 6.4e-44 182.2 185 54.6
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 6.4e-44 182.2 273 41.8
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 8.4e-44 181.8 276 41.3
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.1e-43 181.4 253 43.1
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 1.4e-43 181.0 246 43.5
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 2.4e-43 180.3 292 41.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 3.2e-43 179.9 256 43.8
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 4.1e-43 179.5 269 42.8
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 7.1e-43 178.7 270 41.5
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 7.1e-43 178.7 177 55.4
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 7.1e-43 178.7 178 51.1
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.2e-42 177.9 246 45.9
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.6e-42 177.6 258 45.7
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 1.0e-41 174.9 172 55.2
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 5.1e-41 172.6 158 58.2
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 8.6e-41 171.8 253 46.6
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 2.5e-40 170.2 219 48.9
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 3.3e-40 169.9 302 39.1
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 9.6e-40 168.3 156 57.1
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.2e-37 161.4 250 46.0
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.2e-37 161.4 227 52.0
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.2e-35 152.9 145 58.6
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 3.9e-33 146.4 224 41.5
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 1.9e-32 144.1 255 39.6
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 7.1e-27 125.6 130 53.8
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 1.7e-20 104.4 152 38.8
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 2.2e-20 104.0 151 40.4
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 5.5e-19 99.4 109 47.7
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 6.2e-15 85.9 217 33.6
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 1.0e-12 78.6 123 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 5.5e-11 72.8 127 36.2
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.7e-10 70.5 126 38.9
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 7.4e-08 62.4 60 53.3
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 2.1e-07 60.8 83 39.8
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 2.1e-07 60.8 55 41.8
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 8.2e-07 58.9 50 52.0


User provided reference genes

Program Settings