Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.3e-261 904.4 433 100.0
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.9e-253 878.6 433 97.0
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 8.0e-183 644.0 460 72.0
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 2.2e-172 609.4 447 66.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 3.7e-172 608.6 461 64.2
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.4e-171 605.9 457 66.1
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.0e-170 602.8 452 65.7
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 7.8e-170 600.9 440 65.9
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 7.8e-170 600.9 443 66.1
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 2.9e-169 599.0 444 65.5
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 1.1e-168 597.0 440 67.0
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 2.8e-167 592.4 443 64.6
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 1.8e-166 589.7 450 65.1
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 2.3e-166 589.3 442 64.5
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 4.0e-166 588.6 459 63.6
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 3.4e-165 585.5 470 62.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 9.8e-165 583.9 451 63.0
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.3e-164 583.6 453 64.2
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 1.3e-164 583.6 460 62.2
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.9e-164 582.4 451 62.7
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 6.4e-164 581.3 456 63.2
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 6.4e-164 581.3 436 64.0
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 1.6e-162 576.6 448 63.4
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 6.0e-162 574.7 441 63.5
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 3.9e-161 572.0 468 61.5
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 6.6e-161 571.2 461 62.3
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 2.5e-160 569.3 445 62.9
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 2.5e-160 569.3 444 62.6
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 3.3e-160 568.9 463 61.1
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 9.5e-160 567.4 460 61.3
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 3.1e-158 562.4 457 60.4
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.0e-158 562.0 472 59.7
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 4.0e-158 562.0 468 60.5
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 4.0e-158 562.0 455 60.4
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 5.2e-158 561.6 472 60.0
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.2e-157 560.5 472 60.2
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 9.8e-157 557.4 517 57.3
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.3e-156 557.0 443 59.1
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 2.2e-156 556.2 475 59.2
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 8.3e-156 554.3 443 59.1
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.4e-155 552.7 441 64.4
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 2.4e-155 552.7 448 59.8
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 3.2e-155 552.4 456 61.0
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 5.4e-155 551.6 456 62.3
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.3e-153 546.2 477 59.7
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 5.1e-153 545.0 445 61.1
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 5.1e-153 545.0 457 58.9
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.5e-152 543.5 454 58.6
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.5e-152 543.5 465 58.3
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.5e-152 543.5 451 59.6
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 6.2e-151 538.1 455 58.9
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 6.2e-151 538.1 451 59.4
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 2.0e-149 533.1 451 59.0
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 2.6e-149 532.7 451 57.4
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 7.5e-149 531.2 440 60.9
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.7e-148 530.0 452 58.8
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.9e-148 529.3 461 57.7
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 6.4e-148 528.1 462 57.6
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 2.4e-147 526.2 454 57.7
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 3.2e-147 525.8 440 58.6
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 2.7e-146 522.7 480 56.0
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.6e-146 521.9 460 55.9
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.6e-146 521.9 460 55.9
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 1.0e-145 520.8 430 61.6
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.3e-145 520.4 440 58.2
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.3e-145 519.6 486 54.9
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 5.1e-145 518.5 441 57.1
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 5.1e-145 518.5 395 64.3
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 2.5e-144 516.2 454 56.8
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 3.3e-144 515.8 440 57.0
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 3.3e-144 515.8 440 57.0
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 3.3e-144 515.8 445 57.3
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 1.6e-143 513.5 442 57.5
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 2.8e-143 512.7 460 55.0
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 3.6e-143 512.3 451 56.8
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 4.7e-143 511.9 441 56.7
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.4e-142 510.4 446 57.8
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 3.1e-142 509.2 451 58.3
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 3.1e-142 509.2 489 52.8
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 5.2e-142 508.4 472 56.4
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.2e-141 507.3 472 56.6
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 5.8e-141 505.0 469 54.4
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 3.2e-139 499.2 410 63.4
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 7.3e-136 488.0 451 55.2
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 4.8e-135 485.3 470 53.2
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 2.4e-131 473.0 492 50.6
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 2.1e-130 469.9 436 54.6
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.7e-130 469.5 461 53.6
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 6.0e-130 468.4 432 55.1
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 8.1e-127 458.0 440 53.2
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 3.4e-125 452.6 348 64.9
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.7e-122 443.0 349 64.8
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 6.0e-122 441.8 355 65.1
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 4.0e-118 429.1 333 64.3
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 2.6e-117 426.4 369 57.7
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 4.2e-115 419.1 369 57.2
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 2.1e-111 406.8 350 57.4
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 4.8e-103 379.0 436 46.3
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 4.8e-103 379.0 513 40.9
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.3e-102 375.6 435 46.0
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.0e-96 357.1 285 61.1
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 9.1e-94 348.2 486 40.3
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 5.9e-93 345.5 349 52.1
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.5e-83 314.3 444 37.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 2.0e-77 293.9 442 40.3
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 5.9e-77 292.4 449 40.8
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.5e-68 262.3 142 92.3
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 9.4e-67 258.5 142 90.8
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 3.4e-56 223.4 486 32.1
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 3.7e-55 219.9 227 50.2
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 3.9e-44 183.3 463 29.6
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.6e-37 161.4 219 38.8
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 9.5e-35 152.1 279 34.1
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.2e-34 151.8 222 41.0
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.5e-29 133.7 66 95.5
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.1e-22 112.1 145 45.5
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 2.1e-21 107.8 116 44.0
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.0e-20 104.0 199 37.2
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 2.1e-18 97.8 260 26.5
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.1e-17 95.5 51 90.2
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.4e-14 85.1 107 41.1
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.9e-14 84.7 68 58.8
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.9e-11 74.7 55 67.3
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.3e-10 72.0 46 71.7
AUR62018418 Chenopodium quinoa HOM05D000009 ORTHO05D006588 2.4e-06 57.8 28 92.9


User provided reference genes

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